Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 19 665 NP_079284 17 3301 NP_061905 17 3301 NP_001275537 17 3301 XP_006711453 17 3301 XP_006711452 17 3301 NP_001156 17 4312 NP_892007 17 4312 NP_060043 17 4312 XP_006722836 17 4312 XP_006722835 17 4312 XP_005259642 17 4312 XP_006722834 17 4312 XP_005259640 17 4312 NP_001104595 16 5631 XP_006724647 16 5631 XP_006724646 16 5631 XP_006724645 16 5631 XP_006724644 16 5631 XP_006724643 16 5631 XP_006724642 16 5631 XP_006719590 16 5631 NP_055890 16 5631 NP_000495 16 7355 NP_775321 16 7355 NP_036329 16 7355 NP_001106649 16 7355 NP_619728 16 7355 NP_006590 16 7355 NP_619727 16 7355 NP_775322 16 7355 NP_114147 16 7355 XP_005260150 16 7355 XP_005255834 16 7355 XP_006721188 16 7355 XP_005268355 16 7355 XP_006720027 16 7355 XP_006717095 16 7355 XP_006717094 16 7355 XP_005251923 16 7355 NP_055186 15 9605 NP_001278407 15 9605 NP_588614 15 9605 NP_001185787 15 9605 NP_478072 15 9605 NP_079526 15 9605 NP_004609 15 9605 XP_005276373 15 9605 XP_005275603 15 9605 XP_005272864 15 9605 XP_005274912 15 9605 XP_005259911 15 9605 XP_005256833 15 9605 XP_005253460 15 9605 XP_006719161 15 9605 XP_005249108 15 9605 XP_005262993 15 9605 XP_005262994 15 9605 XP_005246374 15 9605 NP_060558 15 9605 NP_777559 15 9605 NP_938022 15 9605>NP_115803 Length = 1156 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KQTLQRQI 8 KQTLQRQI Sbjct: 757 KQTLQRQI 764>NP_079284 Length = 877 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQRQIR 9 TLQRQ+R Sbjct: 641 TLQRQVR 647>NP_061905 Length = 1074 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQRQIR 9 TLQRQ+R Sbjct: 641 TLQRQVR 647>NP_001275537 Length = 1097 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQRQIR 9 TLQRQ+R Sbjct: 664 TLQRQVR 670>XP_006711453 Length = 555 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQRQIR 9 TLQRQ+R Sbjct: 122 TLQRQVR 128>XP_006711452 Length = 805 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQRQIR 9 TLQRQ+R Sbjct: 641 TLQRQVR 647>NP_001156 Length = 604 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQTLQRQI 8 KQT+QR+I Sbjct: 396 KQTVQRKI 403>NP_892007 Length = 604 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQTLQRQI 8 KQT+QR+I Sbjct: 396 KQTVQRKI 403>NP_060043 Length = 755 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KQTLQRQIR 9 +QTLQR+++ Sbjct: 104 QQTLQRRVK 112>XP_006722836 Length = 510 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KQTLQRQIR 9 +QTLQR+++ Sbjct: 104 QQTLQRRVK 112>XP_006722835 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KQTLQRQIR 9 +QTLQR+++ Sbjct: 104 QQTLQRRVK 112>XP_005259642 Length = 617 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KQTLQRQIR 9 +QTLQR+++ Sbjct: 104 QQTLQRRVK 112>XP_006722834 Length = 697 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KQTLQRQIR 9 +QTLQR+++ Sbjct: 104 QQTLQRRVK 112>XP_005259640 Length = 746 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KQTLQRQIR 9 +QTLQR+++ Sbjct: 104 QQTLQRRVK 112>NP_001104595 Length = 1488 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQTLQRQIR 9 KQT QR+ R Sbjct: 731 KQTYQRETR 739>XP_006724647 Length = 1186 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQTLQRQIR 9 KQT QR+ R Sbjct: 763 KQTYQRETR 771>XP_006724646 Length = 1200 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQTLQRQIR 9 KQT QR+ R Sbjct: 763 KQTYQRETR 771>XP_006724645 Length = 1212 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQTLQRQIR 9 KQT QR+ R Sbjct: 763 KQTYQRETR 771>XP_006724644 Length = 1244 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQTLQRQIR 9 KQT QR+ R Sbjct: 763 KQTYQRETR 771>XP_006724643 Length = 1283 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQTLQRQIR 9 KQT QR+ R Sbjct: 526 KQTYQRETR 534>XP_006724642 Length = 1520 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQTLQRQIR 9 KQT QR+ R Sbjct: 763 KQTYQRETR 771>XP_006719590 Length = 559 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KQTLQRQ 7 KQTLQ+Q Sbjct: 213 KQTLQQQ 219>NP_055890 Length = 949 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQTLQRQIR 9 KQT QR+ R Sbjct: 526 KQTYQRETR 534>NP_000495 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQTLQRQIR 9 KQTL+R+ R Sbjct: 174 KQTLERRKR 182>NP_775321 Length = 1455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLQRQI 8 QTLQ+QI Sbjct: 675 QTLQQQI 681>NP_036329 Length = 1069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQTLQRQIR 9 K+TL+ Q+R Sbjct: 1000 KETLKNQLR 1008>NP_001106649 Length = 1548 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLQRQI 8 QTLQ+QI Sbjct: 768 QTLQQQI 774>NP_619728 Length = 1455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLQRQI 8 QTLQ+QI Sbjct: 675 QTLQQQI 681>NP_006590 Length = 1531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLQRQI 8 QTLQ+QI Sbjct: 751 QTLQQQI 757>NP_619727 Length = 1549 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLQRQI 8 QTLQ+QI Sbjct: 769 QTLQQQI 775>NP_775322 Length = 1455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLQRQI 8 QTLQ+QI Sbjct: 675 QTLQQQI 681>NP_114147 Length = 703 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KQTLQRQIR 9 K+TLQ++++ Sbjct: 208 KETLQKEVQ 216>XP_005260150 Length = 703 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KQTLQRQIR 9 K+TLQ++++ Sbjct: 208 KETLQKEVQ 216>XP_005255834 Length = 1264 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLQRQI 8 QTLQ+QI Sbjct: 484 QTLQQQI 490>XP_006721188 Length = 1484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLQRQI 8 QTLQ+QI Sbjct: 704 QTLQQQI 710>XP_005268355 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQTLQRQIR 9 KQTL+R+ R Sbjct: 174 KQTLERRKR 182>XP_006720027 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQTLQRQIR 9 KQTL+R+ R Sbjct: 130 KQTLERRKR 138>XP_006717095 Length = 900 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQTLQRQIR 9 K+TL+ Q+R Sbjct: 831 KETLKNQLR 839>XP_006717094 Length = 1069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQTLQRQIR 9 K+TL+ Q+R Sbjct: 1000 KETLKNQLR 1008>XP_005251923 Length = 1069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQTLQRQIR 9 K+TL+ Q+R Sbjct: 1000 KETLKNQLR 1008>NP_055186 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LQRQIR 9 LQRQIR Sbjct: 623 LQRQIR 628>NP_001278407 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LQRQIR 9 LQRQIR Sbjct: 562 LQRQIR 567>NP_588614 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QTLQRQIR 9 QTLQ Q+R Sbjct: 718 QTLQFQLR 725>NP_001185787 Length = 227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KQTLQRQI 8 + TLQRQ+ Sbjct: 115 RTTLQRQV 122>NP_478072 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLQRQIR 9 TLQ+Q+R Sbjct: 39 TLQKQLR 45>NP_079526 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QTLQRQI 8 QTL+RQ+ Sbjct: 152 QTLERQL 158>NP_004609 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQTLQRQIR 9 K+TL+R+ R Sbjct: 130 KKTLERETR 138>XP_005276373 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QTLQRQIR 9 QTLQ+Q R Sbjct: 18 QTLQKQRR 25>XP_005275603 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KQTLQRQI 8 + TLQRQ+ Sbjct: 115 RTTLQRQV 122>XP_005272864 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KQTLQRQI 8 + TLQRQ+ Sbjct: 115 RTTLQRQV 122>XP_005274912 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KQTLQRQI 8 + TLQRQ+ Sbjct: 115 RTTLQRQV 122>XP_005259911 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LQRQIR 9 LQRQIR Sbjct: 589 LQRQIR 594>XP_005256833 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQTLQRQIR 9 K+TL+R+ R Sbjct: 35 KKTLERETR 43>XP_005253460 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QTLQRQIR 9 QTLQ+Q R Sbjct: 18 QTLQKQRR 25>XP_006719161 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QTLQRQIR 9 QTLQ+Q R Sbjct: 18 QTLQKQRR 25>XP_005249108 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KQTLQRQI 8 + TLQRQ+ Sbjct: 115 RTTLQRQV 122>XP_005262993 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LQRQIR 9 LQRQIR Sbjct: 713 LQRQIR 718>XP_005262994 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LQRQIR 9 LQRQIR Sbjct: 713 LQRQIR 718>XP_005246374 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQTLQRQIR 9 K LQRQ+R Sbjct: 141 KLQLQRQLR 149>NP_060558 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QTLQRQIR 9 QTLQ+Q R Sbjct: 18 QTLQKQRR 25>NP_777559 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQTLQRQIR 9 K LQRQ+R Sbjct: 166 KLQLQRQLR 174>NP_938022 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LQRQIR 9 LQRQIR Sbjct: 713 LQRQIR 718Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.131 0.320 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 404,423 Number of extensions: 737 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |