Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 18 1482 NP_005913 18 1482 XP_005267046 18 1482 XP_005267045 18 1482 NP_002464 16 5631 NP_008877 16 7355 XP_005274250 16 7355 XP_006718734 16 7355 XP_006718733 16 7355 XP_005274249 16 7355 XP_006718732 16 7355 NP_008986 15 9605 NP_004951 15 9605 NP_001164408 15 9605 NP_001164105 15 9605 NP_001192244 15 9605 NP_078912 15 9605 NP_001092759 15 9605 NP_006651 15 9605 NP_631961 15 9605 NP_849155 15 9605 XP_005255290 15 9605 XP_006717660 15 9605 XP_005262815 15 9605 XP_006714148 15 9605 XP_006714147 15 9605 NP_003478 15 9605>NP_006715 Length = 1558 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQMGLIKLI 9 KQMGL KLI Sbjct: 535 KQMGLRKLI 543>NP_005913 Length = 1608 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQMGLIKLI 9 KQMGL KLI Sbjct: 535 KQMGLRKLI 543>XP_005267046 Length = 1554 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQMGLIKLI 9 KQMGL KLI Sbjct: 535 KQMGLRKLI 543>XP_005267045 Length = 1604 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQMGLIKLI 9 KQMGL KLI Sbjct: 535 KQMGLRKLI 543>NP_002464 Length = 1960 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KQMGLIKLI 9 +QMGL+++I Sbjct: 335 EQMGLLRVI 343>NP_008877 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQMGLIKLI 9 K++GL KL+ Sbjct: 246 KELGLTKLL 254>XP_005274250 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQMGLIKLI 9 K++GL KL+ Sbjct: 246 KELGLTKLL 254>XP_006718734 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQMGLIKLI 9 K++GL KL+ Sbjct: 246 KELGLTKLL 254>XP_006718733 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQMGLIKLI 9 K++GL KL+ Sbjct: 246 KELGLTKLL 254>XP_005274249 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQMGLIKLI 9 K++GL KL+ Sbjct: 246 KELGLTKLL 254>XP_006718732 Length = 2397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQMGLIKLI 9 K++GL KL+ Sbjct: 253 KELGLTKLL 261>NP_008986 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQMGLIKLI 9 K+ GL+K+I Sbjct: 167 KKCGLLKII 175>NP_004951 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQMGLIK 7 KQ+G+IK Sbjct: 306 KQIGIIK 312>NP_001164408 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQMGLIK 7 KQ+G+IK Sbjct: 302 KQIGIIK 308>NP_001164105 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQMGLIK 7 KQ+G+IK Sbjct: 305 KQIGIIK 311>NP_001192244 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KQMGLIKL 8 KQ+GL+ L Sbjct: 291 KQLGLVAL 298>NP_078912 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KQMGLIKL 8 KQ+GL+ L Sbjct: 291 KQLGLVAL 298>NP_001092759 Length = 882 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQMGLIKLI 9 K+ GL+KL+ Sbjct: 719 KKSGLLKLL 727>NP_006651 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMGLIKLI 9 Q GL+KL+ Sbjct: 381 QQGLLKLL 388>NP_631961 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQMGLIK 7 KQ+G+IK Sbjct: 255 KQIGIIK 261>NP_849155 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KQMGLIKL 8 K +GLIKL Sbjct: 130 KLLGLIKL 137>XP_005255290 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQMGLIK 7 KQ+G+IK Sbjct: 101 KQIGIIK 107>XP_006717660 Length = 1369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQMGLIKLI 9 K+ GL+K+I Sbjct: 146 KKCGLLKII 154>XP_005262815 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KQMGLIKL 8 K +GLIKL Sbjct: 130 KLLGLIKL 137>XP_006714148 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KQMGLIKL 8 K +GLIKL Sbjct: 130 KLLGLIKL 137>XP_006714147 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KQMGLIKL 8 K +GLIKL Sbjct: 130 KLLGLIKL 137>NP_003478 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQMGLIK 7 KQ+G+IK Sbjct: 252 KQIGIIK 258Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.153 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 426,157 Number of extensions: 680 Number of successful extensions: 27 Number of sequences better than 10000.0: 27 Number of HSP's gapped: 27 Number of HSP's successfully gapped: 27 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |