Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 18 1482 XP_005266703 18 1482 NP_001128669 17 4312 XP_005265157 17 4312 XP_005265156 17 4312 XP_006713187 17 4312 NP_835467 17 4312 NP_056280 16 5631 NP_001239085 16 5631 XP_005248127 16 5631 XP_005248126 16 5631 XP_005248124 16 5631 XP_005248123 16 5631 XP_005248122 16 5631 XP_005248121 16 5631 XP_005248120 16 5631 XP_006714059 16 5631 XP_005248119 16 5631 XP_005248118 16 5631 XP_005248117 16 5631 XP_005248116 16 5631 XP_005248115 16 5631 XP_005248114 16 5631 NP_005076 16 7355 NP_004531 16 7355 XP_006724071 16 7355 XP_006724070 16 7355 XP_006718456 16 7355 XP_005272276 16 7355 XP_005272275 16 7355 XP_006717355 16 7355 XP_005272274 16 7355 XP_005272273 16 7355 NP_001123920 16 7355 NP_001230280 15 9605 NP_057202 15 9605 NP_009185 15 9605 NP_005885 15 9605 NP_892030 15 9605 XP_006725244 15 9605 XP_006725241 15 9605 XP_006725240 15 9605 XP_006720705 15 9605 XP_006720456 15 9605 XP_005254219 15 9605 XP_005250069 15 9605 XP_005250068 15 9605 XP_005250067 15 9605 XP_005245659 15 9605 XP_003846701 15 9605 NP_001094874 15 9605>NP_443179 Length = 2170 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQLSIGKSK 9 KQ SIGKSK Sbjct: 2141 KQPSIGKSK 2149>XP_005266703 Length = 1501 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQLSIGKSK 9 KQ SIGKSK Sbjct: 1472 KQPSIGKSK 1480>NP_001128669 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSIGKSK 9 LS+GKSK Sbjct: 107 LSVGKSK 113>XP_005265157 Length = 577 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSIGKSK 9 LS+GKSK Sbjct: 90 LSVGKSK 96>XP_005265156 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSIGKSK 9 LS+GKSK Sbjct: 107 LSVGKSK 113>XP_006713187 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSIGKSK 9 LS+GKSK Sbjct: 107 LSVGKSK 113>NP_835467 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSIGKSK 9 LS+GKSK Sbjct: 107 LSVGKSK 113>NP_056280 Length = 1508 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KQLSIGKS 8 KQLS GKS Sbjct: 1134 KQLSEGKS 1141>NP_001239085 Length = 1507 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KQLSIGKS 8 KQLS GKS Sbjct: 1133 KQLSEGKS 1140>XP_005248127 Length = 1322 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLSIGKS 8 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>XP_005248126 Length = 1359 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLSIGKS 8 K+LSIGK+ Sbjct: 371 KRLSIGKA 378>XP_005248124 Length = 1467 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLSIGKS 8 K+LSIGK+ Sbjct: 483 KRLSIGKA 490>XP_005248123 Length = 1471 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLSIGKS 8 K+LSIGK+ Sbjct: 483 KRLSIGKA 490>XP_005248122 Length = 1471 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLSIGKS 8 K+LSIGK+ Sbjct: 483 KRLSIGKA 490>XP_005248121 Length = 1543 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLSIGKS 8 K+LSIGK+ Sbjct: 555 KRLSIGKA 562>XP_005248120 Length = 1549 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLSIGKS 8 K+LSIGK+ Sbjct: 561 KRLSIGKA 568>XP_006714059 Length = 1600 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLSIGKS 8 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>XP_005248119 Length = 1601 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLSIGKS 8 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>XP_005248118 Length = 1602 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLSIGKS 8 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>XP_005248117 Length = 1626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLSIGKS 8 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>XP_005248116 Length = 1627 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLSIGKS 8 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>XP_005248115 Length = 1629 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLSIGKS 8 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>XP_005248114 Length = 1630 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLSIGKS 8 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>NP_005076 Length = 2090 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQLSIGK 7 KQL++GK Sbjct: 205 KQLAVGK 211>NP_004531 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLSIGKSK 9 +LS+G+SK Sbjct: 31 ELSVGESK 38>XP_006724071 Length = 699 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLSIGKSK 9 +LS+G+SK Sbjct: 31 ELSVGESK 38>XP_006724070 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLSIGKSK 9 +LS+G+SK Sbjct: 31 ELSVGESK 38>XP_006718456 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQLSIGK 7 KQL++GK Sbjct: 737 KQLTVGK 743>XP_005272276 Length = 2036 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQLSIGK 7 KQL++GK Sbjct: 246 KQLAVGK 252>XP_005272275 Length = 2083 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQLSIGK 7 KQL++GK Sbjct: 246 KQLAVGK 252>XP_006717355 Length = 2120 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQLSIGK 7 KQL++GK Sbjct: 246 KQLAVGK 252>XP_005272274 Length = 2121 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQLSIGK 7 KQL++GK Sbjct: 246 KQLAVGK 252>XP_005272273 Length = 2132 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQLSIGK 7 KQL++GK Sbjct: 246 KQLAVGK 252>NP_001123920 Length = 175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQLSIGKSK 9 KQLS+G+ + Sbjct: 16 KQLSLGRPR 24>NP_001230280 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KQLSIGKS 8 KQL +GK+ Sbjct: 158 KQLQLGKT 165>NP_057202 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KQLSIGKS 8 KQL +GK+ Sbjct: 158 KQLQLGKT 165>NP_009185 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QLSIGKSK 9 Q+SIG+ K Sbjct: 219 QMSIGRGK 226>NP_005885 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KQLSIGKS 8 KQL GKS Sbjct: 283 KQLGCGKS 290>NP_892030 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLSIGKSK 9 +LS+G+SK Sbjct: 141 RLSVGQSK 148>XP_006725244 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLSIGKSK 9 +LS+G+SK Sbjct: 123 RLSVGQSK 130>XP_006725241 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLSIGKSK 9 +LS+G+SK Sbjct: 123 RLSVGQSK 130>XP_006725240 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLSIGKSK 9 +LS+G+SK Sbjct: 141 RLSVGQSK 148>XP_006720705 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQLSIGK 7 KQLS+G+ Sbjct: 6 KQLSLGR 12>XP_006720456 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLSIGKSK 9 +LS+G+SK Sbjct: 141 RLSVGQSK 148>XP_005254219 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLSIGKSK 9 +LS+G+SK Sbjct: 141 RLSVGQSK 148>XP_005250069 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KQLSIGKS 8 KQL +GK+ Sbjct: 158 KQLQLGKT 165>XP_005250068 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KQLSIGKS 8 KQL +GK+ Sbjct: 134 KQLQLGKT 141>XP_005250067 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KQLSIGKS 8 KQL +GK+ Sbjct: 158 KQLQLGKT 165>XP_005245659 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KQLSIGKS 8 KQL GKS Sbjct: 283 KQLGCGKS 290>XP_003846701 Length = 143 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QLSIGKSK 9 QLS+GK + Sbjct: 131 QLSVGKKQ 138>NP_001094874 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KQLSIGK 7 KQLS+G+ Sbjct: 6 KQLSLGR 12Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.119 0.279 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 460,043 Number of extensions: 666 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |