Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_060141 18 1482 NP_008835 17 2528 NP_001075109 17 2528 NP_000570 16 5631 NP_001093638 16 5631 NP_004696 16 5631 NP_872381 16 5631 XP_005258854 16 5631 XP_005258855 16 5631 XP_005258852 16 5631 XP_005258850 16 5631 XP_005258848 16 5631 XP_005272158 16 5631 NP_114158 16 5631 NP_848537 16 7355 NP_113659 16 7355 NP_006823 16 7355 NP_001271203 16 7355 NP_877497 16 7355 XP_005267342 16 7355 XP_006718768 16 7355 XP_006718767 16 7355 XP_006718766 16 7355 XP_005269612 16 7355 NP_001005178 16 7355 NP_001128302 15 9605 NP_060121 15 9605 NP_001128303 15 9605 NP_001128304 15 9605 NP_005021 15 9605 NP_001120965 15 9605 NP_066187 15 9605 NP_001139 15 9605 NP_001257936 15 9605 NP_001257935 15 9605 NP_659435 15 9605 XP_005256396 15 9605 XP_005267096 15 9605 XP_006715570 15 9605 XP_006714257 15 9605 XP_006714256 15 9605 XP_006714255 15 9605 XP_005263005 15 9605 XP_006714254 15 9605 XP_006714253 15 9605 XP_005263002 15 9605 XP_005262999 15 9605 XP_006714252 15 9605 XP_006714251 15 9605 XP_006714250 15 9605>NP_060141 Length = 677 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 KQLASRLLE 9 KQLA+R+LE Sbjct: 530 KQLAARILE 538>NP_008835 Length = 4128 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQLASRLLE 9 KQLAS LLE Sbjct: 1508 KQLASGLLE 1516>NP_001075109 Length = 4097 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQLASRLLE 9 KQLAS LLE Sbjct: 1508 KQLASGLLE 1516>NP_000570 Length = 352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLASRLL 8 KQ+A+RLL Sbjct: 26 KQIAARLL 33>NP_001093638 Length = 352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KQLASRLL 8 KQ+A+RLL Sbjct: 26 KQIAARLL 33>NP_004696 Length = 761 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KQLASRLLE 9 K +ASRLLE Sbjct: 341 KVVASRLLE 349>NP_872381 Length = 350 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KQLASRLL 8 K LASRLL Sbjct: 287 KMLASRLL 294>XP_005258854 Length = 237 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KQLASRLL 8 K LASRLL Sbjct: 174 KMLASRLL 181>XP_005258855 Length = 237 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KQLASRLL 8 K LASRLL Sbjct: 174 KMLASRLL 181>XP_005258852 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KQLASRLL 8 K LASRLL Sbjct: 257 KMLASRLL 264>XP_005258850 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KQLASRLL 8 K LASRLL Sbjct: 313 KMLASRLL 320>XP_005258848 Length = 383 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KQLASRLL 8 K LASRLL Sbjct: 320 KMLASRLL 327>XP_005272158 Length = 135 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QLASRLLE 9 QLA RLLE Sbjct: 96 QLACRLLE 103>NP_114158 Length = 254 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QLASRLLE 9 QLA RLLE Sbjct: 96 QLACRLLE 103>NP_848537 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQL R+LE Sbjct: 518 KQLTPRILE 526>NP_113659 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQL R+LE Sbjct: 514 KQLTPRILE 522>NP_006823 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQLASRLLE 9 KQ+ +R+LE Sbjct: 533 KQITARILE 541>NP_001271203 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQL RLL+ Sbjct: 285 KQLVERLLQ 293>NP_877497 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQL RLL+ Sbjct: 281 KQLVERLLQ 289>XP_005267342 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQLASRLLE 9 KQ+ +R+LE Sbjct: 544 KQITARILE 552>XP_006718768 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQL R+LE Sbjct: 334 KQLTPRILE 342>XP_006718767 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQL R+LE Sbjct: 467 KQLTPRILE 475>XP_006718766 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQL R+LE Sbjct: 514 KQLTPRILE 522>XP_005269612 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQL RLL+ Sbjct: 174 KQLVERLLQ 182>NP_001005178 Length = 320 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQ+ RLLE Sbjct: 303 KQIRDRLLE 311>NP_001128302 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQL SRL E Sbjct: 411 KQLKSRLPE 419>NP_060121 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQL SRL E Sbjct: 411 KQLKSRLPE 419>NP_001128303 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQL SRL E Sbjct: 411 KQLKSRLPE 419>NP_001128304 Length = 1053 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQL SRL E Sbjct: 411 KQLKSRLPE 419>NP_005021 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KQLASRL 7 K+LASRL Sbjct: 574 KELASRL 580>NP_001120965 Length = 1863 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASRLLE 9 LASRL+E Sbjct: 1017 LASRLIE 1023>NP_066187 Length = 1872 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASRLLE 9 LASRL+E Sbjct: 1026 LASRLIE 1032>NP_001139 Length = 3957 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASRLLE 9 LASRL+E Sbjct: 1026 LASRLIE 1032>NP_001257936 Length = 58 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KQLASRLL 8 K+L SRLL Sbjct: 12 KELVSRLL 19>NP_001257935 Length = 81 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KQLASRLL 8 K+L SRLL Sbjct: 12 KELVSRLL 19>NP_659435 Length = 63 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KQLASRLL 8 K+L SRLL Sbjct: 12 KELVSRLL 19>XP_005256396 Length = 131 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KQLASRLL 8 K+L SRLL Sbjct: 12 KELVSRLL 19>XP_005267096 Length = 1168 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQL SRL E Sbjct: 411 KQLKSRLPE 419>XP_006715570 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KQLASRLLE 9 KQL SRL E Sbjct: 411 KQLKSRLPE 419>XP_006714257 Length = 4145 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASRLLE 9 LASRL+E Sbjct: 1068 LASRLIE 1074>XP_006714256 Length = 1901 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASRLLE 9 LASRL+E Sbjct: 1088 LASRLIE 1094>XP_006714255 Length = 1970 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASRLLE 9 LASRL+E Sbjct: 1076 LASRLIE 1082>XP_005263005 Length = 2019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASRLLE 9 LASRL+E Sbjct: 1058 LASRLIE 1064>XP_006714254 Length = 2049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASRLLE 9 LASRL+E Sbjct: 1088 LASRLIE 1094>XP_006714253 Length = 2069 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASRLLE 9 LASRL+E Sbjct: 1088 LASRLIE 1094>XP_005263002 Length = 4072 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASRLLE 9 LASRL+E Sbjct: 1026 LASRLIE 1032>XP_005262999 Length = 4147 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASRLLE 9 LASRL+E Sbjct: 1070 LASRLIE 1076>XP_006714252 Length = 4153 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASRLLE 9 LASRL+E Sbjct: 1076 LASRLIE 1082>XP_006714251 Length = 4165 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASRLLE 9 LASRL+E Sbjct: 1088 LASRLIE 1094>XP_006714250 Length = 4190 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASRLLE 9 LASRL+E Sbjct: 1080 LASRLIE 1086Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.128 0.290 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 304,365 Number of extensions: 518 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |