Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 18 1135 XP_005266703 18 1135 NP_005465 17 2528 NP_001015053 17 2528 XP_006721692 17 2528 XP_005256964 17 2528 XP_005256963 17 2528 XP_005256962 17 2528 XP_005256961 17 2528 NP_005076 17 3301 NP_000740 17 3301 XP_005272276 17 3301 XP_005272275 17 3301 XP_006717355 17 3301 XP_005272274 17 3301 XP_005272273 17 3301 NP_597677 17 4312 NP_056199 17 4312 XP_005248339 17 4312 XP_005248337 17 4312 XP_006714531 17 4312 XP_006714530 17 4312 NP_997320 16 7355 NP_004781 16 7355 NP_695008 16 7355 NP_695010 16 7355 NP_695009 16 7355 NP_037517 16 7355 NP_060269 16 7355 XP_006720240 16 7355 XP_006720238 16 7355 XP_005253612 16 7355 XP_006718456 16 7355 XP_003846701 16 7355 NP_694948 16 7355 NP_001230280 15 9605 NP_057202 15 9605 NP_054730 15 9605 XP_006720705 15 9605 XP_005250069 15 9605 XP_005250068 15 9605 XP_005250067 15 9605 NP_001123920 15 9605 NP_001094874 15 9605 NP_659198 15 9605>NP_443179 Length = 2170 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQKQ SIGK Sbjct: 2139 KQKQPSIGK 2147>XP_005266703 Length = 1501 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQKQ SIGK Sbjct: 1470 KQKQPSIGK 1478>NP_005465 Length = 1122 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQ+QL +GK Sbjct: 525 KQQQLQLGK 533>NP_001015053 Length = 1123 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQ+QL +GK Sbjct: 526 KQQQLQLGK 534>XP_006721692 Length = 1081 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQ+QL +GK Sbjct: 484 KQQQLQLGK 492>XP_005256964 Length = 1118 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQ+QL +GK Sbjct: 521 KQQQLQLGK 529>XP_005256963 Length = 1122 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQ+QL +GK Sbjct: 525 KQQQLQLGK 533>XP_005256962 Length = 1122 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQ+QL +GK Sbjct: 525 KQQQLQLGK 533>XP_005256961 Length = 1123 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQ+QL +GK Sbjct: 526 KQQQLQLGK 534>NP_005076 Length = 2090 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 K KQL++GK Sbjct: 203 KGKQLAVGK 211>NP_000740 Length = 458 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQKQLS G+ Sbjct: 377 KQKQLSDGE 385>XP_005272276 Length = 2036 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 K KQL++GK Sbjct: 244 KGKQLAVGK 252>XP_005272275 Length = 2083 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 K KQL++GK Sbjct: 244 KGKQLAVGK 252>XP_006717355 Length = 2120 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 K KQL++GK Sbjct: 244 KGKQLAVGK 252>XP_005272274 Length = 2121 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 K KQL++GK Sbjct: 244 KGKQLAVGK 252>XP_005272273 Length = 2132 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 K KQL++GK Sbjct: 244 KGKQLAVGK 252>NP_597677 Length = 2804 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQK++ +GK Sbjct: 325 KQKKMKLGK 333>NP_056199 Length = 2697 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQK++ +GK Sbjct: 325 KQKKMKLGK 333>XP_005248339 Length = 2584 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQK++ +GK Sbjct: 105 KQKKMKLGK 113>XP_005248337 Length = 2698 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQK++ +GK Sbjct: 325 KQKKMKLGK 333>XP_006714531 Length = 2738 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQK++ +GK Sbjct: 325 KQKKMKLGK 333>XP_006714530 Length = 2755 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 KQK++ +GK Sbjct: 325 KQKKMKLGK 333>NP_997320 Length = 4471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KQKQLSIGK 9 KQK L +G+ Sbjct: 605 KQKYLEVGR 613>NP_004781 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKQLSIGK 9 QK+L++GK Sbjct: 314 QKELTMGK 321>NP_695008 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKQLSIGK 9 QK+L++GK Sbjct: 314 QKELTMGK 321>NP_695010 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKQLSIGK 9 QK+L++GK Sbjct: 314 QKELTMGK 321>NP_695009 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKQLSIGK 9 QK+L++GK Sbjct: 314 QKELTMGK 321>NP_037517 Length = 394 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQKQLSIGK 9 K+K+L IG+ Sbjct: 61 KEKELCIGR 69>NP_060269 Length = 707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KQKQLSIG 8 K+K+LS+G Sbjct: 210 KKKELSLG 217>XP_006720240 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KQKQLSIG 8 K+K+LS+G Sbjct: 210 KKKELSLG 217>XP_006720238 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KQKQLSIG 8 K+K+LS+G Sbjct: 210 KKKELSLG 217>XP_005253612 Length = 4589 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KQKQLSIGK 9 KQK L +G+ Sbjct: 723 KQKYLEVGR 731>XP_006718456 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KQLSIGK 9 KQL++GK Sbjct: 737 KQLTVGK 743>XP_003846701 Length = 143 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQKQLSIGK 9 K QLS+GK Sbjct: 128 KGTQLSVGK 136>NP_694948 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KQKQLSIG 8 +QK+LS+G Sbjct: 134 RQKRLSLG 141>NP_001230280 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QKQLSIGK 9 +KQL +GK Sbjct: 157 KKQLQLGK 164>NP_057202 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QKQLSIGK 9 +KQL +GK Sbjct: 157 KKQLQLGK 164>NP_054730 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KQKQLSIG 8 K+K +SIG Sbjct: 41 KEKNISIG 48>XP_006720705 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KQLSIGK 9 KQLS+G+ Sbjct: 6 KQLSLGR 12>XP_005250069 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QKQLSIGK 9 +KQL +GK Sbjct: 157 KKQLQLGK 164>XP_005250068 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QKQLSIGK 9 +KQL +GK Sbjct: 133 KKQLQLGK 140>XP_005250067 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QKQLSIGK 9 +KQL +GK Sbjct: 157 KKQLQLGK 164>NP_001123920 Length = 175 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KQLSIGK 9 KQLS+G+ Sbjct: 16 KQLSLGR 22>NP_001094874 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KQLSIGK 9 KQLS+G+ Sbjct: 6 KQLSLGR 12>NP_659198 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KQKQLSIG 8 K+K +SIG Sbjct: 41 KEKNISIG 48Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.124 0.298 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 494,410 Number of extensions: 598 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |