Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 509 XP_006716142 20 509 XP_005250088 20 509 XP_006716141 20 509 XP_005250085 20 509 XP_006716140 20 509 XP_005250084 20 509 XP_005250083 20 509 XP_005250082 20 509 NP_001714 18 1935 XP_005249383 18 1935 NP_001255981 17 3301 NP_001255980 17 3301 NP_665803 17 3301 NP_001166094 16 5631 NP_002490 16 5631 XP_005254473 16 5631 XP_005254472 16 5631 XP_005254471 16 5631 XP_005254470 16 5631 XP_005254469 16 5631 XP_005254468 16 5631 XP_005254467 16 5631 XP_005254465 16 5631 NP_001166095 16 5631 NP_068781 16 7355 NP_065101 16 7355 NP_001153218 16 7355 NP_057636 16 7355 NP_001269710 16 7355 NP_001269709 16 7355 NP_001269700 16 7355 NP_001243776 16 7355 NP_001269078 16 7355 NP_001083 16 7355 XP_006725355 16 7355 XP_006721570 16 7355 XP_006712635 16 7355 XP_006712634 16 7355 XP_006712633 16 7355 XP_006712632 16 7355 XP_005247077 16 7355 XP_006712631 16 7355 XP_006712630 16 7355 NP_078853 15 9605 NP_001018082 15 9605 NP_001017523 15 9605 NP_001193762 15 9605 NP_874369 15 9605 NP_006379 15 9605 NP_874368 15 9605 NP_057363 15 9605 XP_005268702 15 9605 XP_006718484 15 9605>NP_733751 Length = 4911 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQAMYYSTD 9 KQAMY STD Sbjct: 3875 KQAMYSSTD 3883>XP_006716142 Length = 4927 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQAMYYSTD 9 KQAMY STD Sbjct: 3892 KQAMYSSTD 3900>XP_005250088 Length = 4928 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQAMYYSTD 9 KQAMY STD Sbjct: 3892 KQAMYSSTD 3900>XP_006716141 Length = 4959 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQAMYYSTD 9 KQAMY STD Sbjct: 3892 KQAMYSSTD 3900>XP_005250085 Length = 4979 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQAMYYSTD 9 KQAMY STD Sbjct: 3892 KQAMYSSTD 3900>XP_006716140 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQAMYYSTD 9 KQAMY STD Sbjct: 3892 KQAMYSSTD 3900>XP_005250084 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQAMYYSTD 9 KQAMY STD Sbjct: 3892 KQAMYSSTD 3900>XP_005250083 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQAMYYSTD 9 KQAMY STD Sbjct: 3891 KQAMYSSTD 3899>XP_005250082 Length = 4983 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KQAMYYSTD 9 KQAMY STD Sbjct: 3892 KQAMYSSTD 3900>NP_001714 Length = 2649 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KQAMYYS 7 KQA+YYS Sbjct: 2298 KQALYYS 2304>XP_005249383 Length = 3186 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KQAMYYS 7 KQA+YYS Sbjct: 2835 KQALYYS 2841>NP_001255981 Length = 404 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KQAMYYS 7 KQA YYS Sbjct: 385 KQAFYYS 391>NP_001255980 Length = 404 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KQAMYYS 7 KQA YYS Sbjct: 385 KQAFYYS 391>NP_665803 Length = 1025 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KQAMYYSTD 9 ++AMYYS + Sbjct: 718 QEAMYYSAE 726>NP_001166094 Length = 1408 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MYYSTD 9 +YYSTD Sbjct: 992 IYYSTD 997>NP_002490 Length = 1461 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MYYSTD 9 +YYSTD Sbjct: 992 IYYSTD 997>XP_005254473 Length = 1408 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MYYSTD 9 +YYSTD Sbjct: 992 IYYSTD 997>XP_005254472 Length = 1428 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MYYSTD 9 +YYSTD Sbjct: 1012 IYYSTD 1017>XP_005254471 Length = 1450 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MYYSTD 9 +YYSTD Sbjct: 992 IYYSTD 997>XP_005254470 Length = 1454 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MYYSTD 9 +YYSTD Sbjct: 996 IYYSTD 1001>XP_005254469 Length = 1461 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MYYSTD 9 +YYSTD Sbjct: 992 IYYSTD 997>XP_005254468 Length = 1465 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MYYSTD 9 +YYSTD Sbjct: 996 IYYSTD 1001>XP_005254467 Length = 1470 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MYYSTD 9 +YYSTD Sbjct: 1012 IYYSTD 1017>XP_005254465 Length = 1481 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MYYSTD 9 +YYSTD Sbjct: 1012 IYYSTD 1017>NP_001166095 Length = 1450 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MYYSTD 9 +YYSTD Sbjct: 992 IYYSTD 997>NP_068781 Length = 859 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KQAMYYSTD 9 + +Y+STD Sbjct: 850 RNTLYFSTD 858>NP_065101 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KQAMYYSTD 9 ++ +YY TD Sbjct: 132 RKKLYYDTD 140>NP_001153218 Length = 813 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KQAMYYSTD 9 + +Y+STD Sbjct: 804 RNTLYFSTD 812>NP_057636 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 YYSTD 9 YYSTD Sbjct: 646 YYSTD 650>NP_001269710 Length = 702 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 YYSTD 9 YYSTD Sbjct: 407 YYSTD 411>NP_001269709 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 YYSTD 9 YYSTD Sbjct: 505 YYSTD 509>NP_001269700 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 YYSTD 9 YYSTD Sbjct: 735 YYSTD 739>NP_001243776 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KQAMYYSTD 9 + +Y+STD Sbjct: 301 RNTLYFSTD 309>NP_001269078 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KQAMYYSTD 9 + +Y+STD Sbjct: 632 RNTLYFSTD 640>NP_001083 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KQAMYYSTD 9 + +Y+STD Sbjct: 813 RNTLYFSTD 821>XP_006725355 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KQAMYYSTD 9 + +Y+STD Sbjct: 862 RNTLYFSTD 870>XP_006721570 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KQAMYYSTD 9 + +Y+STD Sbjct: 1109 RNTLYFSTD 1117>XP_006712635 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 YYSTD 9 YYSTD Sbjct: 315 YYSTD 319>XP_006712634 Length = 703 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 YYSTD 9 YYSTD Sbjct: 408 YYSTD 412>XP_006712633 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 YYSTD 9 YYSTD Sbjct: 416 YYSTD 420>XP_006712632 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 YYSTD 9 YYSTD Sbjct: 505 YYSTD 509>XP_005247077 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 YYSTD 9 YYSTD Sbjct: 483 YYSTD 487>XP_006712631 Length = 800 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 YYSTD 9 YYSTD Sbjct: 505 YYSTD 509>XP_006712630 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 YYSTD 9 YYSTD Sbjct: 646 YYSTD 650>NP_078853 Length = 1288 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KQAMYYS 7 K+A+YY+ Sbjct: 1204 KEALYYA 1210>NP_001018082 Length = 1104 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KQAMYYSTD 9 ++AMY+S + Sbjct: 796 REAMYHSAE 804>NP_001017523 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KQAMYYSTD 9 ++AMY+S + Sbjct: 333 REAMYHSAE 341>NP_001193762 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 QAMYYSTD 9 + +YY TD Sbjct: 308 KTLYYDTD 315>NP_874369 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 QAMYYSTD 9 + +YY TD Sbjct: 360 KTLYYDTD 367>NP_006379 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 QAMYYSTD 9 + +YY TD Sbjct: 327 KTLYYDTD 334>NP_874368 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 QAMYYSTD 9 + +YY TD Sbjct: 275 KTLYYDTD 282>NP_057363 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 AMYYST 8 AMYY T Sbjct: 489 AMYYET 494>XP_005268702 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KQAMYYSTD 9 ++AMY+S + Sbjct: 419 REAMYHSAE 427>XP_006718484 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 QAMYYSTD 9 + +YY TD Sbjct: 336 KTLYYDTD 343Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.116 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 458,791 Number of extensions: 601 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |