Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275707 18 1935 NP_001275705 18 1935 NP_004415 18 1935 NP_006323 18 1935 XP_006720921 18 1935 XP_006720920 18 1935 XP_005255213 18 1935 XP_005255212 18 1935 NP_775760 17 3301 XP_006714502 17 3301 NP_077010 16 5631 NP_005222 16 7355 NP_001265003 16 7355 NP_005236 16 7355 NP_055325 16 7355 NP_149015 16 7355 NP_689600 16 7355 XP_006718884 16 7355 XP_006718882 16 7355 XP_006718511 16 7355 XP_006715989 16 7355 XP_006714202 16 7355 XP_005262892 16 7355 XP_005262891 16 7355 XP_005246358 16 7355 NP_001077073 15 9605 NP_001077075 15 9605 NP_001077076 15 9605 NP_001077072 15 9605 NP_001077071 15 9605 NP_000255 15 9605 NP_001077074 15 9605 NP_001093581 15 9605 NP_061004 15 9605 NP_003293 15 9605 NP_071394 15 9605 NP_001166160 15 9605 NP_001177410 15 9605 NP_001267730 15 9605 NP_001166162 15 9605 NP_060904 15 9605 NP_671724 15 9605 NP_001166163 15 9605 NP_689573 15 9605 XP_005252159 15 9605 XP_006714953 15 9605 NP_001166161 15 9605 NP_060228 15 9605>NP_001275707 Length = 607 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNYKTGSLL 9 K +KTGS+L Sbjct: 199 KTFKTGSIL 207>NP_001275705 Length = 654 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNYKTGSLL 9 K +KTGS+L Sbjct: 199 KTFKTGSIL 207>NP_004415 Length = 784 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNYKTGSLL 9 K +KTGS+L Sbjct: 199 KTFKTGSIL 207>NP_006323 Length = 250 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NYKTGSL 8 NYKTG+L Sbjct: 42 NYKTGNL 48>XP_006720921 Length = 783 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNYKTGSLL 9 K +KTGS+L Sbjct: 199 KTFKTGSIL 207>XP_006720920 Length = 785 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNYKTGSLL 9 K +KTGS+L Sbjct: 200 KTFKTGSIL 208>XP_005255213 Length = 836 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNYKTGSLL 9 K +KTGS+L Sbjct: 252 KTFKTGSIL 260>XP_005255212 Length = 837 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNYKTGSLL 9 K +KTGS+L Sbjct: 252 KTFKTGSIL 260>NP_775760 Length = 1585 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNYKTGSLL 9 +N+K GSLL Sbjct: 924 ENFKIGSLL 932>XP_006714502 Length = 1064 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNYKTGSLL 9 +N+K GSLL Sbjct: 407 ENFKIGSLL 415>NP_077010 Length = 488 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YKTGSLL 9 YK GSLL Sbjct: 341 YKAGSLL 347>NP_005222 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KNYKTG 6 K+YKTG Sbjct: 263 KDYKTG 268>NP_001265003 Length = 1838 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YKTGSLL 9 YK GSLL Sbjct: 1707 YKRGSLL 1713>NP_005236 Length = 4588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NYKTGSL 8 +YKTG+L Sbjct: 1930 DYKTGAL 1936>NP_055325 Length = 4935 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KNYKTGSL 8 K YK GSL Sbjct: 3558 KTYKGGSL 3565>NP_149015 Length = 5142 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KNYKTGSL 8 K YK GSL Sbjct: 3558 KTYKGGSL 3565>NP_689600 Length = 426 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 NYKTG 6 NYKTG Sbjct: 268 NYKTG 272>XP_006718884 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNYKTGSLL 9 K YK+G +L Sbjct: 129 KQYKSGRIL 137>XP_006718882 Length = 182 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNYKTGSLL 9 K YK+G +L Sbjct: 129 KQYKSGRIL 137>XP_006718511 Length = 369 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KNYKTG 6 K+YKTG Sbjct: 263 KDYKTG 268>XP_006715989 Length = 5148 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KNYKTGSL 8 K YK GSL Sbjct: 3558 KTYKGGSL 3565>XP_006714202 Length = 4588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NYKTGSL 8 +YKTG+L Sbjct: 1930 DYKTGAL 1936>XP_005262892 Length = 4600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NYKTGSL 8 +YKTG+L Sbjct: 1930 DYKTGAL 1936>XP_005262891 Length = 4600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NYKTGSL 8 +YKTG+L Sbjct: 1930 DYKTGAL 1936>XP_005246358 Length = 426 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 NYKTG 6 NYKTG Sbjct: 268 NYKTG 272>NP_001077073 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 NYKTGS 7 NYK GS Sbjct: 721 NYKNGS 726>NP_001077075 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 NYKTGS 7 NYK GS Sbjct: 721 NYKNGS 726>NP_001077076 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 NYKTGS 7 NYK GS Sbjct: 721 NYKNGS 726>NP_001077072 Length = 1446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 NYKTGS 7 NYK GS Sbjct: 871 NYKNGS 876>NP_001077071 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 NYKTGS 7 NYK GS Sbjct: 806 NYKNGS 811>NP_000255 Length = 1447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 NYKTGS 7 NYK GS Sbjct: 872 NYKNGS 877>NP_001077074 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 NYKTGS 7 NYK GS Sbjct: 721 NYKNGS 726>NP_001093581 Length = 112 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NYKTGSLL 9 +YKTG ++ Sbjct: 56 SYKTGEMI 63>NP_061004 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNYKTGSLL 9 +N+K G+LL Sbjct: 810 ENFKGGTLL 818>NP_003293 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YKTGSL 8 Y+TGSL Sbjct: 131 YRTGSL 136>NP_071394 Length = 1339 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTGSLL 9 KTGSLL Sbjct: 1251 KTGSLL 1256>NP_001166160 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KNYKTGSLL 9 K Y TGS L Sbjct: 305 KTYTTGSKL 313>NP_001177410 Length = 1275 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTGSLL 9 KTGSLL Sbjct: 1187 KTGSLL 1192>NP_001267730 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNYKTGSLL 9 KN+ GSL+ Sbjct: 188 KNFSRGSLV 196>NP_001166162 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KNYKTGSLL 9 K Y TGS L Sbjct: 391 KTYTTGSKL 399>NP_060904 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNYKTGSLL 9 KN+ GSL+ Sbjct: 188 KNFSRGSLV 196>NP_671724 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YKTGSLL 9 Y+TGS++ Sbjct: 295 YRTGSIM 301>NP_001166163 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KNYKTGSLL 9 K Y TGS L Sbjct: 305 KTYTTGSKL 313>NP_689573 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KNYKTGSLL 9 K Y TGS L Sbjct: 335 KTYTTGSKL 343>XP_005252159 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 NYKTGS 7 NYK GS Sbjct: 721 NYKNGS 726>XP_006714953 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNYKTGSLL 9 KN+ GSL+ Sbjct: 188 KNFSRGSLV 196>NP_001166161 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KNYKTGSLL 9 K Y TGS L Sbjct: 393 KTYTTGSKL 401>NP_060228 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 NYKTGS 7 NYK GS Sbjct: 22 NYKAGS 27Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.128 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 643,343 Number of extensions: 832 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |