Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 299 NP_001035957 20 299 XP_006721991 20 299 XP_006721990 20 299 XP_006721989 20 299 XP_005258041 20 299 XP_006721988 20 299 XP_006721987 20 299 XP_006721986 20 299 XP_005258040 20 299 XP_006721985 20 299 XP_006710508 17 2528 XP_006710507 17 2528 NP_689910 17 2528 NP_001123530 17 2528 NP_006659 17 4312 XP_005267331 17 4312 NP_000548 16 5631 NP_659436 16 5631 NP_008949 16 5631 XP_006722338 16 5631 XP_006717007 16 5631 XP_006717006 16 5631 XP_006717005 16 5631 XP_006717004 16 5631 XP_006717003 16 5631 XP_005251736 16 5631 NP_005912 16 7355 NP_001001557 16 7355 NP_002729 16 7355 NP_997700 16 7355 NP_036364 16 7355 NP_004648 16 7355 XP_005257299 16 7355 XP_005248577 16 7355 XP_005248576 16 7355 NP_061720 16 7355 NP_058649 15 9605 NP_060391 15 9605 NP_055178 15 9605 NP_872302 15 9605 NP_001264984 15 9605 NP_060358 15 9605 XP_006721119 15 9605 XP_006721118 15 9605 XP_005266395 15 9605 XP_006719293 15 9605 XP_006715527 15 9605>NP_000258 Length = 2818 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNTISKFLD 9 KNTISKF D Sbjct: 938 KNTISKFFD 946>NP_001035957 Length = 2839 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNTISKFLD 9 KNTISKF D Sbjct: 938 KNTISKFFD 946>XP_006721991 Length = 1632 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNTISKFLD 9 KNTISKF D Sbjct: 948 KNTISKFFD 956>XP_006721990 Length = 2823 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNTISKFLD 9 KNTISKF D Sbjct: 948 KNTISKFFD 956>XP_006721989 Length = 2823 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNTISKFLD 9 KNTISKF D Sbjct: 948 KNTISKFFD 956>XP_005258041 Length = 2836 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNTISKFLD 9 KNTISKF D Sbjct: 938 KNTISKFFD 946>XP_006721988 Length = 2846 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNTISKFLD 9 KNTISKF D Sbjct: 948 KNTISKFFD 956>XP_006721987 Length = 2849 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNTISKFLD 9 KNTISKF D Sbjct: 948 KNTISKFFD 956>XP_006721986 Length = 2854 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNTISKFLD 9 KNTISKF D Sbjct: 935 KNTISKFFD 943>XP_005258040 Length = 2857 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNTISKFLD 9 KNTISKF D Sbjct: 938 KNTISKFFD 946>XP_006721985 Length = 2867 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNTISKFLD 9 KNTISKF D Sbjct: 948 KNTISKFFD 956>XP_006710508 Length = 677 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KNTISKFL 8 +NT+SKFL Sbjct: 502 QNTLSKFL 509>XP_006710507 Length = 719 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KNTISKFL 8 +NT+SKFL Sbjct: 544 QNTLSKFL 551>NP_689910 Length = 719 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KNTISKFL 8 +NT+SKFL Sbjct: 544 QNTLSKFL 551>NP_001123530 Length = 717 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KNTISKFL 8 +NT+SKFL Sbjct: 544 QNTLSKFL 551>NP_006659 Length = 500 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KNTISKFL 8 +NT++KFL Sbjct: 226 RNTLAKFL 233>XP_005267331 Length = 355 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KNTISKFL 8 +NT++KFL Sbjct: 81 RNTLAKFL 88>NP_000548 Length = 501 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTISKFLD 9 NTI+ F+D Sbjct: 200 NTITSFID 207>NP_659436 Length = 670 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTISKFLD 9 NT+ +FLD Sbjct: 85 NTVLRFLD 92>NP_008949 Length = 2325 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KNTISKFLD 9 KN + KF D Sbjct: 1457 KNAVEKFTD 1465>XP_006722338 Length = 473 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTISKFLD 9 NT+ +FLD Sbjct: 85 NTVLRFLD 92>XP_006717007 Length = 1499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KNTISKFLD 9 KN + KF D Sbjct: 1457 KNAVEKFTD 1465>XP_006717006 Length = 1760 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KNTISKFLD 9 KN + KF D Sbjct: 877 KNAVEKFTD 885>XP_006717005 Length = 1788 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KNTISKFLD 9 KN + KF D Sbjct: 905 KNAVEKFTD 913>XP_006717004 Length = 2240 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KNTISKFLD 9 KN + KF D Sbjct: 1457 KNAVEKFTD 1465>XP_006717003 Length = 2278 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KNTISKFLD 9 KN + KF D Sbjct: 1457 KNAVEKFTD 1465>XP_005251736 Length = 2325 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KNTISKFLD 9 KN + KF D Sbjct: 1457 KNAVEKFTD 1465>NP_005912 Length = 1512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KNTISKFL 8 +NTI KF+ Sbjct: 405 RNTIQKFV 412>NP_001001557 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTISKFLD 9 NTI+ F+D Sbjct: 125 NTITSFVD 132>NP_002729 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTISKF 7 NT+SKF Sbjct: 323 NTVSKF 328>NP_997700 Length = 671 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTISKF 7 NT+SKF Sbjct: 323 NTVSKF 328>NP_036364 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTISKFLD 9 NT+SK L+ Sbjct: 105 NTVSKLLE 112>NP_004648 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTISKFLD 9 NT+SK L+ Sbjct: 109 NTVSKLLE 116>XP_005257299 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTISKFLD 9 NT+SK L+ Sbjct: 105 NTVSKLLE 112>XP_005248577 Length = 1349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KNTISKFL 8 +NTI KF+ Sbjct: 242 RNTIQKFV 249>XP_005248576 Length = 1375 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KNTISKFL 8 +NTI KF+ Sbjct: 268 RNTIQKFV 275>NP_061720 Length = 4024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTISKFLD 9 +T+S FLD Sbjct: 871 STVSSFLD 878>NP_058649 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KNTISKFLD 9 K +SKF D Sbjct: 251 KTLVSKFFD 259>NP_060391 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNTISKFLD 9 +NT S FLD Sbjct: 494 QNTSSVFLD 502>NP_055178 Length = 4579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KNTISKFL 8 K+T+ KFL Sbjct: 2953 KDTLKKFL 2960>NP_872302 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KNTISKF 7 +NTI KF Sbjct: 130 RNTIKKF 136>NP_001264984 Length = 4432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KNTISKFL 8 K+T+ KFL Sbjct: 2806 KDTLKKFL 2813>NP_060358 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTISKF 7 NT+SKF Sbjct: 307 NTLSKF 312>XP_006721119 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTISKF 7 NT+SKF Sbjct: 307 NTLSKF 312>XP_006721118 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTISKF 7 NT+SKF Sbjct: 307 NTLSKF 312>XP_005266395 Length = 4588 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KNTISKFL 8 K+T+ KFL Sbjct: 2962 KDTLKKFL 2969>XP_006719293 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KNTISKF 7 +NTI KF Sbjct: 130 RNTIKKF 136>XP_006715527 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NTISKFLD 9 +TIS+FL+ Sbjct: 266 STISRFLE 273Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.133 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 383,410 Number of extensions: 598 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |