Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 19 869 NP_036462 19 869 NP_001243397 19 869 XP_005269721 19 869 NP_620636 18 1935 NP_003062 18 1935 XP_005247781 18 1935 NP_003585 17 3301 XP_005271334 17 3301 XP_006711044 17 3301 XP_006711043 17 3301 XP_006711042 17 3301 NP_003174 16 7355 NP_001157755 15 9605 NP_079410 15 9605 NP_679211 15 9605 NP_001157753 15 9605 NP_659469 15 9605 NP_001104508 15 9605 NP_001274079 15 9605 NP_001171671 15 9605 NP_006768 15 9605 XP_005256233 15 9605 XP_005256232 15 9605 XP_005256231 15 9605 XP_005256229 15 9605 XP_005256228 15 9605 XP_005256227 15 9605 XP_006721346 15 9605 XP_005256226 15 9605 XP_006721345 15 9605 XP_006721344 15 9605 XP_006721343 15 9605 XP_005256225 15 9605 XP_005250270 15 9605 XP_005250269 15 9605 XP_005250266 15 9605 XP_006715960 15 9605 XP_005250265 15 9605 XP_005250264 15 9605 XP_005250262 15 9605 XP_006715382 15 9605>NP_001243398 Length = 1781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNILLRRSK 9 KNILLR SK Sbjct: 469 KNILLRHSK 477>NP_036462 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNILLRRSK 9 KNILLR SK Sbjct: 761 KNILLRHSK 769>NP_001243397 Length = 1890 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNILLRRSK 9 KNILLR SK Sbjct: 578 KNILLRHSK 586>XP_005269721 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNILLRRSK 9 KNILLR SK Sbjct: 761 KNILLRHSK 769>NP_620636 Length = 1009 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KNILLRRSK 9 KNI LRR+K Sbjct: 638 KNITLRRTK 646>NP_003062 Length = 1009 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KNILLRRSK 9 KNI LRR+K Sbjct: 638 KNITLRRTK 646>XP_005247781 Length = 1008 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KNILLRRSK 9 KNI LRR+K Sbjct: 637 KNITLRRTK 645>NP_003585 Length = 1162 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KNILLRRSK 9 K++LLRR+K Sbjct: 814 KSLLLRRTK 822>XP_005271334 Length = 1161 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KNILLRRSK 9 K++LLRR+K Sbjct: 813 KSLLLRRTK 821>XP_006711044 Length = 1168 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KNILLRRSK 9 K++LLRR+K Sbjct: 820 KSLLLRRTK 828>XP_006711043 Length = 1169 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KNILLRRSK 9 K++LLRR+K Sbjct: 821 KSLLLRRTK 829>XP_006711042 Length = 1169 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KNILLRRSK 9 K++LLRR+K Sbjct: 821 KSLLLRRTK 829>NP_003174 Length = 824 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNILLRRSK 9 KN+ LR+ K Sbjct: 620 KNLFLRKGK 628>NP_001157755 Length = 109 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KNILLR 6 KNILLR Sbjct: 81 KNILLR 86>NP_079410 Length = 2881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILLRRSK 9 ILLRR+K Sbjct: 1382 ILLRRTK 1388>NP_679211 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KNILLR 6 KNILLR Sbjct: 537 KNILLR 542>NP_001157753 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KNILLR 6 KNILLR Sbjct: 536 KNILLR 541>NP_659469 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KNILLR 6 KNILLR Sbjct: 72 KNILLR 77>NP_001104508 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KNILLR 6 KNILLR Sbjct: 72 KNILLR 77>NP_001274079 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KNILLR 6 KNILLR Sbjct: 72 KNILLR 77>NP_001171671 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KNILLRRSK 9 KN+++++SK Sbjct: 145 KNLVIQKSK 153>NP_006768 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KNILLRRSK 9 KN+++++SK Sbjct: 145 KNLVIQKSK 153>XP_005256233 Length = 2391 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILLRRSK 9 ILLRR+K Sbjct: 875 ILLRRTK 881>XP_005256232 Length = 2424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILLRRSK 9 ILLRR+K Sbjct: 908 ILLRRTK 914>XP_005256231 Length = 2573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILLRRSK 9 ILLRR+K Sbjct: 1382 ILLRRTK 1388>XP_005256229 Length = 2881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILLRRSK 9 ILLRR+K Sbjct: 1382 ILLRRTK 1388>XP_005256228 Length = 2882 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILLRRSK 9 ILLRR+K Sbjct: 1382 ILLRRTK 1388>XP_005256227 Length = 2897 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILLRRSK 9 ILLRR+K Sbjct: 1382 ILLRRTK 1388>XP_006721346 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILLRRSK 9 ILLRR+K Sbjct: 1382 ILLRRTK 1388>XP_005256226 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILLRRSK 9 ILLRR+K Sbjct: 1382 ILLRRTK 1388>XP_006721345 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILLRRSK 9 ILLRR+K Sbjct: 1382 ILLRRTK 1388>XP_006721344 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILLRRSK 9 ILLRR+K Sbjct: 1382 ILLRRTK 1388>XP_006721343 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILLRRSK 9 ILLRR+K Sbjct: 1382 ILLRRTK 1388>XP_005256225 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILLRRSK 9 ILLRR+K Sbjct: 1382 ILLRRTK 1388>XP_005250270 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KNILLR 6 KNILLR Sbjct: 72 KNILLR 77>XP_005250269 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KNILLR 6 KNILLR Sbjct: 162 KNILLR 167>XP_005250266 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KNILLR 6 KNILLR Sbjct: 72 KNILLR 77>XP_006715960 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KNILLR 6 KNILLR Sbjct: 74 KNILLR 79>XP_005250265 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KNILLR 6 KNILLR Sbjct: 162 KNILLR 167>XP_005250264 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KNILLR 6 KNILLR Sbjct: 162 KNILLR 167>XP_005250262 Length = 825 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KNILLR 6 KNILLR Sbjct: 162 KNILLR 167>XP_006715382 Length = 109 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KNILLR 6 KNILLR Sbjct: 81 KNILLR 86Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.139 0.342 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 432,112 Number of extensions: 511 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |