Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 19 665 XP_005251512 19 665 NP_001561 18 1935 NP_008835 17 2528 NP_001075109 17 2528 NP_005126 17 3301 NP_598408 17 3301 NP_001035959 17 3301 NP_001035962 17 3301 NP_001035960 17 3301 NP_001035961 17 3301 XP_006720856 17 3301 NP_640339 17 4312 NP_065759 17 4312 NP_001128243 17 4312 NP_006589 17 4312 NP_006132 17 4312 NP_001273086 17 4312 XP_006725069 17 4312 XP_006717042 17 4312 XP_005251797 17 4312 XP_005248288 17 4312 NP_835227 16 5631 NP_067045 16 5631 XP_005245451 16 5631 XP_005245450 16 5631 NP_659477 16 5631 NP_001073291 16 7355 NP_000417 16 7355 NP_060040 16 7355 NP_001153101 16 7355 NP_003636 16 7355 NP_001136089 16 7355 NP_001185970 16 7355 NP_001185971 16 7355 NP_001185969 16 7355 NP_001136091 16 7355 XP_005267039 16 7355 XP_005267038 16 7355 NP_001136090 16 7355 NP_071764 16 7355 NP_001001712 16 7355 NP_055448 16 7355 NP_037368 15 9605 NP_001161093 15 9605 NP_075048 15 9605 NP_055839 15 9605>NP_004963 Length = 1132 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNILLFREE 9 KNILL REE Sbjct: 677 KNILLIREE 685>XP_005251512 Length = 1132 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNILLFREE 9 KNILL REE Sbjct: 677 KNILLIREE 685>NP_001561 Length = 625 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KNILLFREE 9 +NILL++EE Sbjct: 607 ENILLYKEE 615>NP_008835 Length = 4128 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNILLFREE 9 KNIL FR++ Sbjct: 3318 KNILAFRDQ 3326>NP_001075109 Length = 4097 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNILLFREE 9 KNIL FR++ Sbjct: 3318 KNILAFRDQ 3326>NP_005126 Length = 1099 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 KN+ LF EE Sbjct: 80 KNLALFEEE 88>NP_598408 Length = 1150 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 KN+ LF EE Sbjct: 131 KNLALFEEE 139>NP_001035959 Length = 1091 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 KN+ LF EE Sbjct: 72 KNLALFEEE 80>NP_001035962 Length = 1135 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 KN+ LF EE Sbjct: 116 KNLALFEEE 124>NP_001035960 Length = 1091 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 KN+ LF EE Sbjct: 72 KNLALFEEE 80>NP_001035961 Length = 1141 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 KN+ LF EE Sbjct: 122 KNLALFEEE 130>XP_006720856 Length = 1101 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 KN+ LF EE Sbjct: 131 KNLALFEEE 139>NP_640339 Length = 516 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNILLFREE 9 KN+ LFRE+ Sbjct: 341 KNLELFREK 349>NP_065759 Length = 1116 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 KN+ LF EE Sbjct: 43 KNMALFEEE 51>NP_001128243 Length = 1139 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 KN+ LF EE Sbjct: 66 KNMALFEEE 74>NP_006589 Length = 1083 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 KN+ LF EE Sbjct: 67 KNMALFEEE 75>NP_006132 Length = 492 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNILLFREE 9 KNIL+F E+ Sbjct: 55 KNILVFGED 63>NP_001273086 Length = 415 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNILLFREE 9 KNIL+F E+ Sbjct: 55 KNILVFGED 63>XP_006725069 Length = 1088 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 KN+ LF EE Sbjct: 67 KNMALFEEE 75>XP_006717042 Length = 290 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNILLFREE 9 KN+ LFRE+ Sbjct: 115 KNLELFREK 123>XP_005251797 Length = 475 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNILLFREE 9 KN+ LFRE+ Sbjct: 300 KNLELFREK 308>XP_005248288 Length = 1088 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 KN+ LF EE Sbjct: 67 KNMALFEEE 75>NP_835227 Length = 466 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KNILLFREE 9 +N+LLF+++ Sbjct: 156 RNVLLFKKQ 164>NP_067045 Length = 453 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KNILLFREE 9 ++IL+FR+E Sbjct: 80 ESILIFRDE 88>XP_005245451 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KNILLFREE 9 ++IL+FR+E Sbjct: 80 ESILIFRDE 88>XP_005245450 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KNILLFREE 9 ++IL+FR+E Sbjct: 50 ESILIFRDE 58>NP_659477 Length = 261 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NILLFREE 9 ++LLF+EE Sbjct: 123 HVLLFKEE 130>NP_001073291 Length = 3118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NILLFREE 9 N+LL +EE Sbjct: 651 NVLLLKEE 658>NP_000417 Length = 3122 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NILLFREE 9 N+LL +EE Sbjct: 651 NVLLLKEE 658>NP_060040 Length = 1288 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LLFREE 9 LLFREE Sbjct: 1184 LLFREE 1189>NP_001153101 Length = 567 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 K LLFR+E Sbjct: 69 KPFLLFRDE 77>NP_003636 Length = 620 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 K LLFR+E Sbjct: 69 KPFLLFRDE 77>NP_001136089 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KNILLFR 7 +N+LLFR Sbjct: 461 RNLLLFR 467>NP_001185970 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KNILLFR 7 +N+LLFR Sbjct: 476 RNLLLFR 482>NP_001185971 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KNILLFR 7 +N+LLFR Sbjct: 500 RNLLLFR 506>NP_001185969 Length = 704 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KNILLFR 7 +N+LLFR Sbjct: 498 RNLLLFR 504>NP_001136091 Length = 658 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KNILLFR 7 +N+LLFR Sbjct: 452 RNLLLFR 458>XP_005267039 Length = 3206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NILLFREE 9 N+LL +EE Sbjct: 651 NVLLLKEE 658>XP_005267038 Length = 3210 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NILLFREE 9 N+LL +EE Sbjct: 651 NVLLLKEE 658>NP_001136090 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KNILLFR 7 +N+LLFR Sbjct: 461 RNLLLFR 467>NP_071764 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KNILLFR 7 +N+LLFR Sbjct: 461 RNLLLFR 467>NP_001001712 Length = 200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 KN+LLF + Sbjct: 153 KNLLLFHRQ 161>NP_055448 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNILLFREE 9 KNIL+F E Sbjct: 886 KNILMFTGE 894>NP_037368 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ILLFRE 8 ILLFRE Sbjct: 115 ILLFRE 120>NP_001161093 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ILLFRE 8 ILLFRE Sbjct: 51 ILLFRE 56>NP_075048 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ILLFRE 8 ILLFRE Sbjct: 794 ILLFRE 799>NP_055839 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ILLFRE 8 ILLFRE Sbjct: 796 ILLFRE 801Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.149 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 480,562 Number of extensions: 813 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |