Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_659547 17 3301 XP_005255220 17 3301 XP_006721086 17 3301 NP_652760 17 4312 NP_001263191 17 4312 NP_001269851 17 4312 NP_001269852 17 4312 NP_001263189 17 4312 NP_602299 17 4312 NP_001263190 17 4312 NP_652759 17 4312 NP_570613 17 4312 XP_006717293 17 4312 XP_006717292 17 4312 XP_006717291 17 4312 XP_006717290 17 4312 XP_006717289 17 4312 XP_006717288 17 4312 XP_006717287 17 4312 XP_006717285 17 4312 XP_006717284 17 4312 XP_006717283 17 4312 XP_006717282 17 4312 NP_001035351 16 5631 NP_001035350 16 5631 NP_001182345 16 5631 NP_004725 16 5631 NP_001182344 16 5631 XP_006719956 16 5631 XP_005266649 16 5631 XP_005262843 16 5631 XP_005262842 16 5631 NP_001273564 16 7355 NP_001135916 16 7355 NP_001135915 16 7355 NP_079359 16 7355 NP_065928 16 7355 XP_005256527 16 7355 XP_006715080 16 7355 NP_689947 16 7355 NP_001012418 15 9605 NP_001265436 15 9605 NP_001092882 15 9605 NP_006757 15 9605 NP_001092883 15 9605 NP_001139131 15 9605 NP_001264262 15 9605 NP_001008747 15 9605 NP_001264307 15 9605 XP_003959998 15 9605 XP_005273706 15 9605 XP_005249137 15 9605 XP_006715147 15 9605 XP_006715146 15 9605 XP_006715145 15 9605 XP_006715144 15 9605 XP_005249136 15 9605 XP_005249134 15 9605 XP_005249135 15 9605 NP_940897 15 9605 NP_758441 15 9605>NP_659547 Length = 266 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+ +FRK Sbjct: 103 ENELDLFRK 111>XP_005255220 Length = 266 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+ +FRK Sbjct: 103 ENELDLFRK 111>XP_006721086 Length = 266 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+ +FRK Sbjct: 103 ENELDLFRK 111>NP_652760 Length = 311 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 145 KNKLGIFRR 153>NP_001263191 Length = 168 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 2 KNKLGIFRR 10>NP_001269851 Length = 519 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 353 KNKLGIFRR 361>NP_001269852 Length = 1088 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 922 KNKLGIFRR 930>NP_001263189 Length = 519 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 353 KNKLGIFRR 361>NP_602299 Length = 168 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 2 KNKLGIFRR 10>NP_001263190 Length = 591 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 425 KNKLGIFRR 433>NP_652759 Length = 1198 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 1032 KNKLGIFRR 1040>NP_570613 Length = 917 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 751 KNKLGIFRR 759>XP_006717293 Length = 519 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 353 KNKLGIFRR 361>XP_006717292 Length = 519 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 353 KNKLGIFRR 361>XP_006717291 Length = 519 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 353 KNKLGIFRR 361>XP_006717290 Length = 519 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 353 KNKLGIFRR 361>XP_006717289 Length = 519 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 353 KNKLGIFRR 361>XP_006717288 Length = 521 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 355 KNKLGIFRR 363>XP_006717287 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 371 KNKLGIFRR 379>XP_006717285 Length = 824 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 658 KNKLGIFRR 666>XP_006717284 Length = 961 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 795 KNKLGIFRR 803>XP_006717283 Length = 1086 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 920 KNKLGIFRR 928>XP_006717282 Length = 1094 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 KN++ IFR+ Sbjct: 928 KNKLGIFRR 936>NP_001035351 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+SI R+ Sbjct: 455 ENEVSILRR 463>NP_001035350 Length = 766 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+SI R+ Sbjct: 438 ENEVSILRR 446>NP_001182345 Length = 433 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+SI R+ Sbjct: 127 QNEVSILRR 135>NP_004725 Length = 729 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+SI R+ Sbjct: 434 QNEVSILRR 442>NP_001182344 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+SI R+ Sbjct: 127 QNEVSILRR 135>XP_006719956 Length = 740 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+SI R+ Sbjct: 434 QNEVSILRR 442>XP_005266649 Length = 740 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+SI R+ Sbjct: 434 QNEVSILRR 442>XP_005262843 Length = 765 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+SI R+ Sbjct: 437 ENEVSILRR 445>XP_005262842 Length = 782 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+SI R+ Sbjct: 454 ENEVSILRR 462>NP_001273564 Length = 347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NEISIFRK 9 NEISI+ K Sbjct: 6 NEISIYDK 13>NP_001135916 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NEISIFRK 9 NE+S+F K Sbjct: 380 NELSLFSK 387>NP_001135915 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NEISIFRK 9 NE+S+F K Sbjct: 380 NELSLFSK 387>NP_079359 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NEISIFRK 9 NE+S+F K Sbjct: 380 NELSLFSK 387>NP_065928 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNEISIFRK 9 KN++SI K Sbjct: 1684 KNQVSILNK 1692>XP_005256527 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNEISIFRK 9 KN++SI K Sbjct: 1684 KNQVSILNK 1692>XP_006715080 Length = 347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NEISIFRK 9 NEISI+ K Sbjct: 6 NEISIYDK 13>NP_689947 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NEISIFRK 9 NEISI+ K Sbjct: 13 NEISIYDK 20>NP_001012418 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNEISIFRK 9 KNEIS+ + Sbjct: 149 KNEISVMNQ 157>NP_001265436 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+ ++RK Sbjct: 393 ENEMKLYRK 401>NP_001092882 Length = 2004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KNEISIF 7 KN IS+F Sbjct: 573 KNNISVF 579>NP_006757 Length = 2004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KNEISIF 7 KN IS+F Sbjct: 573 KNNISVF 579>NP_001092883 Length = 2004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KNEISIF 7 KN IS+F Sbjct: 573 KNNISVF 579>NP_001139131 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+ ++RK Sbjct: 393 ENEMKLYRK 401>NP_001264262 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNEISIFRK 9 KN IS+ +K Sbjct: 450 KNNISVLQK 458>NP_001008747 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+ ++RK Sbjct: 393 ENEMKLYRK 401>NP_001264307 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NEISIFR 8 +E+SIFR Sbjct: 209 HEVSIFR 215>XP_003959998 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNEISIFRK 9 KN IS+ +K Sbjct: 172 KNNISVLQK 180>XP_005273706 Length = 1997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KNEISIF 7 KN IS+F Sbjct: 566 KNNISVF 572>XP_005249137 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNEISIFRK 9 KNEIS+ + Sbjct: 149 KNEISVMNQ 157>XP_006715147 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNEISIFRK 9 KNEIS+ + Sbjct: 84 KNEISVMNQ 92>XP_006715146 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNEISIFRK 9 KNEIS+ + Sbjct: 138 KNEISVMNQ 146>XP_006715145 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNEISIFRK 9 KNEIS+ + Sbjct: 143 KNEISVMNQ 151>XP_006715144 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNEISIFRK 9 KNEIS+ + Sbjct: 149 KNEISVMNQ 157>XP_005249136 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNEISIFRK 9 KNEIS+ + Sbjct: 149 KNEISVMNQ 157>XP_005249134 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNEISIFRK 9 KNEIS+ + Sbjct: 149 KNEISVMNQ 157>XP_005249135 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNEISIFRK 9 KNEIS+ + Sbjct: 149 KNEISVMNQ 157>NP_940897 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+ ++RK Sbjct: 393 ENEMKLYRK 401>NP_758441 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KNEISIFRK 9 +NE+ ++RK Sbjct: 361 ENEMKLYRK 369Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.138 0.351 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 381,579 Number of extensions: 588 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |