Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 19 869 NP_444254 19 869 NP_444253 19 869 NP_444255 19 869 XP_005247551 19 869 XP_005247550 19 869 XP_006713712 19 869 XP_005247549 19 869 NP_001243239 17 2528 NP_055720 17 2528 XP_005246524 17 2528 XP_006712499 17 2528 XP_006712498 17 2528 NP_963844 17 4312 NP_004620 16 5631 NP_004044 16 7355 NP_001161212 16 7355 NP_001164160 16 7355 NP_543151 16 7355 NP_001164157 16 7355 NP_001164158 16 7355 NP_001164159 16 7355 NP_689424 16 7355 NP_057060 16 7355 XP_005273285 16 7355 XP_006710741 16 7355 XP_006710740 16 7355 XP_006710438 16 7355 XP_006710437 16 7355 XP_006710436 16 7355 XP_006710435 16 7355 XP_006710434 16 7355 XP_006710433 16 7355 XP_006710432 16 7355 XP_006710431 16 7355 XP_006710430 16 7355 XP_006710429 16 7355 NP_899234 16 7355 NP_001277238 15 9605 NP_001894 15 9605 NP_001277236 15 9605 XP_005248822 15 9605 XP_006714599 15 9605 NP_078852 15 9605>NP_444256 Length = 1794 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMGNAVRAI 9 K GNAVRAI Sbjct: 1627 KTGNAVRAI 1635>NP_444254 Length = 1845 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMGNAVRAI 9 K GNAVRAI Sbjct: 1678 KTGNAVRAI 1686>NP_444253 Length = 1914 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMGNAVRAI 9 K GNAVRAI Sbjct: 1747 KTGNAVRAI 1755>NP_444255 Length = 1863 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMGNAVRAI 9 K GNAVRAI Sbjct: 1696 KTGNAVRAI 1704>XP_005247551 Length = 1855 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMGNAVRAI 9 K GNAVRAI Sbjct: 1688 KTGNAVRAI 1696>XP_005247550 Length = 1856 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMGNAVRAI 9 K GNAVRAI Sbjct: 1689 KTGNAVRAI 1697>XP_006713712 Length = 1923 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMGNAVRAI 9 K GNAVRAI Sbjct: 1757 KTGNAVRAI 1765>XP_005247549 Length = 1924 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMGNAVRAI 9 K GNAVRAI Sbjct: 1757 KTGNAVRAI 1765>NP_001243239 Length = 598 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KMGNAVRAI 9 KMGN+V+ I Sbjct: 507 KMGNSVKGI 515>NP_055720 Length = 669 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KMGNAVRAI 9 KMGN+V+ I Sbjct: 507 KMGNSVKGI 515>XP_005246524 Length = 559 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KMGNAVRAI 9 KMGN+V+ I Sbjct: 507 KMGNSVKGI 515>XP_006712499 Length = 604 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KMGNAVRAI 9 KMGN+V+ I Sbjct: 507 KMGNSVKGI 515>XP_006712498 Length = 661 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KMGNAVRAI 9 KMGN+V+ I Sbjct: 507 KMGNSVKGI 515>NP_963844 Length = 277 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 MGN +RA+ Sbjct: 1 MGNTIRAL 8>NP_004620 Length = 622 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KMGNAVRAI 9 KMGN RA+ Sbjct: 258 KMGNPQRAL 266>NP_004044 Length = 437 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GNAVRA 8 GNAVRA Sbjct: 26 GNAVRA 31>NP_001161212 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KMGNAVRAI 9 K GN +RA+ Sbjct: 13 KRGNGLRAV 21>NP_001164160 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 377 LGNAARAL 384>NP_543151 Length = 1070 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 557 LGNAARAL 564>NP_001164157 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 553 LGNAARAL 560>NP_001164158 Length = 1056 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 543 LGNAARAL 550>NP_001164159 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 492 LGNAARAL 499>NP_689424 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KMGNAVRAI 9 +MG VRA+ Sbjct: 173 RMGQTVRAV 181>NP_057060 Length = 451 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KMGNAVRAI 9 +MG VRA+ Sbjct: 228 RMGQTVRAV 236>XP_005273285 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KMGNAVRAI 9 K GN +RA+ Sbjct: 13 KRGNGLRAV 21>XP_006710741 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KMGNAVRAI 9 +MG VRA+ Sbjct: 164 RMGQTVRAV 172>XP_006710740 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KMGNAVRAI 9 +MG VRA+ Sbjct: 250 RMGQTVRAV 258>XP_006710438 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 463 LGNAARAL 470>XP_006710437 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 463 LGNAARAL 470>XP_006710436 Length = 1023 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 477 LGNAARAL 484>XP_006710435 Length = 1034 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 521 LGNAARAL 528>XP_006710434 Length = 1103 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 557 LGNAARAL 564>XP_006710433 Length = 1169 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 656 LGNAARAL 663>XP_006710432 Length = 1202 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 656 LGNAARAL 663>XP_006710431 Length = 1205 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 692 LGNAARAL 699>XP_006710430 Length = 1226 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 713 LGNAARAL 720>XP_006710429 Length = 1238 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGNAVRAI 9 +GNA RA+ Sbjct: 692 LGNAARAL 699>NP_899234 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KMGNAVRAI 9 K GNAV+ I Sbjct: 150 KFGNAVQPI 158>NP_001277238 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KMGNAVRA 8 K GN VRA Sbjct: 17 KRGNMVRA 24>NP_001894 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KMGNAVRA 8 K GN VRA Sbjct: 120 KRGNMVRA 127>NP_001277236 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KMGNAVRA 8 K GN VRA Sbjct: 120 KRGNMVRA 127>XP_005248822 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KMGNAVRAI 9 K GN RA+ Sbjct: 213 KTGNVARAV 221>XP_006714599 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KMGNAVRA 8 K GN VRA Sbjct: 120 KRGNMVRA 127>NP_078852 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KMGNAVRAI 9 K GN RA+ Sbjct: 212 KTGNVARAV 220Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.132 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 373,343 Number of extensions: 421 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |