Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 509 NP_001091680 20 509 NP_001091679 20 509 XP_006713048 20 509 XP_006713047 20 509 XP_006713046 20 509 XP_005264943 20 509 NP_001186091 17 4312 NP_001186090 17 4312 NP_006668 17 4312 NP_001186089 17 4312 XP_005264888 17 4312 XP_006713016 17 4312 XP_005264887 17 4312 XP_006713015 17 4312 XP_006713014 17 4312 XP_006713013 17 4312 XP_006713012 17 4312 XP_006713011 17 4312 XP_005264886 17 4312 XP_006713010 17 4312 XP_005264885 17 4312 XP_005264884 17 4312 XP_005264883 17 4312 XP_005264882 17 4312 XP_006713009 17 4312 XP_005264881 17 4312 XP_005264880 17 4312 NP_001518 16 5631 NP_001011705 16 5631 NP_008946 16 5631 NP_002806 16 5631 NP_001257411 16 5631 XP_006719824 16 5631 XP_006719823 16 5631 NP_653272 16 7355 NP_001171468 16 7355 NP_001171467 16 7355 XP_006719320 16 7355 NP_006438 15 9605 NP_001001992 15 9605 NP_821133 15 9605 NP_001027582 15 9605 NP_116253 15 9605 NP_060546 15 9605 NP_001276949 15 9605 NP_001276950 15 9605 NP_001274427 15 9605 NP_115671 15 9605 NP_996996 15 9605 NP_872433 15 9605 XP_005252542 15 9605 XP_006717518 15 9605 XP_006717517 15 9605 XP_006717516 15 9605 XP_005269377 15 9605 XP_005269376 15 9605>NP_001895 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMAVRFAGG 9 KMAVR AGG Sbjct: 270 KMAVRLAGG 278>NP_001091680 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMAVRFAGG 9 KMAVR AGG Sbjct: 270 KMAVRLAGG 278>NP_001091679 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMAVRFAGG 9 KMAVR AGG Sbjct: 270 KMAVRLAGG 278>XP_006713048 Length = 720 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMAVRFAGG 9 KMAVR AGG Sbjct: 270 KMAVRLAGG 278>XP_006713047 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMAVRFAGG 9 KMAVR AGG Sbjct: 263 KMAVRLAGG 271>XP_006713046 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMAVRFAGG 9 KMAVR AGG Sbjct: 263 KMAVRLAGG 271>XP_005264943 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMAVRFAGG 9 KMAVR AGG Sbjct: 270 KMAVRLAGG 278>NP_001186091 Length = 1372 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 154 VRFAGG 159>NP_001186090 Length = 1384 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 154 VRFAGG 159>NP_006668 Length = 1318 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 154 VRFAGG 159>NP_001186089 Length = 1419 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 154 VRFAGG 159>XP_005264888 Length = 1268 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 139 VRFAGG 144>XP_006713016 Length = 1404 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 139 VRFAGG 144>XP_005264887 Length = 1322 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 154 VRFAGG 159>XP_006713015 Length = 1367 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 139 VRFAGG 144>XP_006713014 Length = 1368 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 139 VRFAGG 144>XP_006713013 Length = 1369 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 139 VRFAGG 144>XP_006713012 Length = 1373 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 154 VRFAGG 159>XP_006713011 Length = 1382 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 154 VRFAGG 159>XP_005264886 Length = 1386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 154 VRFAGG 159>XP_006713010 Length = 1405 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 139 VRFAGG 144>XP_005264885 Length = 1406 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 139 VRFAGG 144>XP_005264884 Length = 1408 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 139 VRFAGG 144>XP_005264883 Length = 1421 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 154 VRFAGG 159>XP_005264882 Length = 1421 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 154 VRFAGG 159>XP_006713009 Length = 1422 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 154 VRFAGG 159>XP_005264881 Length = 1423 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 154 VRFAGG 159>XP_005264880 Length = 1423 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 VRFAGG Sbjct: 154 VRFAGG 159>NP_001518 Length = 488 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MAVRFAGG 9 MAV +AGG Sbjct: 132 MAVNWAGG 139>NP_001011705 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 +RFAGG Sbjct: 123 IRFAGG 128>NP_008946 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 +RFAGG Sbjct: 123 IRFAGG 128>NP_002806 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KMAVRFAG 8 K+A+R+AG Sbjct: 274 KLALRYAG 281>NP_001257411 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KMAVRFAG 8 K+A+R+AG Sbjct: 274 KLALRYAG 281>XP_006719824 Length = 217 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 +RFAGG Sbjct: 123 IRFAGG 128>XP_006719823 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VRFAGG 9 +RFAGG Sbjct: 123 IRFAGG 128>NP_653272 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AVRFAG 8 AVRFAG Sbjct: 80 AVRFAG 85>NP_001171468 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AVRFAG 8 AVRFAG Sbjct: 80 AVRFAG 85>NP_001171467 Length = 262 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AVRFAG 8 AVRFAG Sbjct: 93 AVRFAG 98>XP_006719320 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AVRFAG 8 AVRFAG Sbjct: 80 AVRFAG 85>NP_006438 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KMAVRFAG 8 K AVRF G Sbjct: 287 KKAVRFKG 294>NP_001001992 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KMAVRFAG 8 K AVRF G Sbjct: 286 KKAVRFKG 293>NP_821133 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KMAVRFAG 8 KMAV F G Sbjct: 362 KMAVTFIG 369>NP_001027582 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KMAVRFAG 8 K AVRF G Sbjct: 287 KKAVRFKG 294>NP_116253 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MAVRFAGG 9 M +RF GG Sbjct: 52 MELRFVGG 59>NP_060546 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KMAVRFAGG 9 K A+R AGG Sbjct: 625 KEAIRKAGG 633>NP_001276949 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KMAVRFAGG 9 K A+R AGG Sbjct: 625 KEAIRKAGG 633>NP_001276950 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KMAVRFAGG 9 K A+R AGG Sbjct: 150 KEAIRKAGG 158>NP_001274427 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVRFAGG 9 +V+FAGG Sbjct: 214 SVQFAGG 220>NP_115671 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVRFAGG 9 +V+FAGG Sbjct: 214 SVQFAGG 220>NP_996996 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVRFAGG 9 +V+FAGG Sbjct: 214 SVQFAGG 220>NP_872433 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MAVRFAGG 9 MAV++ GG Sbjct: 1 MAVKWTGG 8>XP_005252542 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KMAVRFAGG 9 K A+R AGG Sbjct: 317 KEAIRKAGG 325>XP_006717518 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KMAVRFAGG 9 K A+R AGG Sbjct: 317 KEAIRKAGG 325>XP_006717517 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KMAVRFAGG 9 K A+R AGG Sbjct: 508 KEAIRKAGG 516>XP_006717516 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KMAVRFAGG 9 K A+R AGG Sbjct: 593 KEAIRKAGG 601>XP_005269377 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MAVRFAGG 9 MAV++ GG Sbjct: 1 MAVKWTGG 8>XP_005269376 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MAVRFAGG 9 MAV++ GG Sbjct: 1 MAVKWTGG 8Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.142 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 407,043 Number of extensions: 380 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |