Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 19 665 XP_005266703 19 665 NP_001243779 18 1135 NP_596869 18 1135 XP_006712787 18 1135 XP_006712786 18 1135 NP_001254479 18 1135 NP_001599 17 2528 NP_116161 17 2528 XP_005246574 17 2528 NP_056520 17 3301 XP_005276377 17 3301 XP_005261636 17 3301 XP_005261634 17 3301 XP_005261632 17 3301 XP_005261631 17 3301 XP_005261630 17 3301 XP_005261629 17 3301 NP_001229326 17 4312 NP_002813 17 4312 NP_000897 17 4312 XP_005245275 17 4312 XP_006711406 17 4312 XP_006711405 17 4312 NP_006454 16 5631 NP_998787 16 5631 NP_964010 16 5631 XP_005264148 16 5631 XP_005264145 16 5631 XP_006711984 16 5631 XP_006711983 16 5631 NP_078948 16 7355 XP_006721518 16 7355 XP_005263278 16 7355 XP_005263277 16 7355 NP_653303 15 9605 NP_006759 15 9605 NP_699181 15 9605 NP_001265246 15 9605 NP_004681 15 9605 NP_001010906 15 9605 NP_055387 15 9605 NP_036436 15 9605 XP_005255189 15 9605 XP_005266399 15 9605 XP_005254001 15 9605 XP_005273560 15 9605 XP_005273559 15 9605 XP_005273558 15 9605 XP_006715666 15 9605 XP_005248330 15 9605 XP_006711253 15 9605 XP_006711252 15 9605 XP_006711251 15 9605 XP_006711248 15 9605 XP_005244983 15 9605>NP_443179 Length = 2170 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLTDVGIET 9 KLTDVGI T Sbjct: 2087 KLTDVGIAT 2095>XP_005266703 Length = 1501 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLTDVGIET 9 KLTDVGI T Sbjct: 1418 KLTDVGIAT 1426>NP_001243779 Length = 34350 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KLTDVGIE 8 +LTDVGIE Sbjct: 5285 RLTDVGIE 5292>NP_596869 Length = 33423 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KLTDVGIE 8 +LTDVGIE Sbjct: 4358 RLTDVGIE 4365>XP_006712787 Length = 33978 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KLTDVGIE 8 +LTDVGIE Sbjct: 5286 RLTDVGIE 5293>XP_006712786 Length = 35484 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KLTDVGIE 8 +LTDVGIE Sbjct: 5286 RLTDVGIE 5293>NP_001254479 Length = 35991 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KLTDVGIE 8 +LTDVGIE Sbjct: 5602 RLTDVGIE 5609>NP_001599 Length = 430 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KLTDVGI 7 KLTD+GI Sbjct: 43 KLTDIGI 49>NP_116161 Length = 646 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KLTDVGIE 8 KL+D+G+E Sbjct: 163 KLSDIGVE 170>XP_005246574 Length = 409 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KLTDVGI 7 KLTD+GI Sbjct: 22 KLTDIGI 28>NP_056520 Length = 749 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTDVGIET 9 LTDV +ET Sbjct: 361 LTDVAVET 368>XP_005276377 Length = 328 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TDVGIET 9 TD+G+ET Sbjct: 23 TDIGLET 29>XP_005261636 Length = 596 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTDVGIET 9 LTDV +ET Sbjct: 294 LTDVAVET 301>XP_005261634 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTDVGIET 9 LTDV +ET Sbjct: 361 LTDVAVET 368>XP_005261632 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTDVGIET 9 LTDV +ET Sbjct: 294 LTDVAVET 301>XP_005261631 Length = 739 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTDVGIET 9 LTDV +ET Sbjct: 361 LTDVAVET 368>XP_005261630 Length = 756 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTDVGIET 9 LTDV +ET Sbjct: 361 LTDVAVET 368>XP_005261629 Length = 766 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTDVGIET 9 LTDV +ET Sbjct: 361 LTDVAVET 368>NP_001229326 Length = 357 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TDVGIET 9 TDVG++T Sbjct: 171 TDVGVDT 177>NP_002813 Length = 350 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TDVGIET 9 TDVG++T Sbjct: 164 TDVGVDT 170>NP_000897 Length = 1061 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLTDVGIET 9 K+TD G+E+ Sbjct: 675 KITDYGLES 683>XP_005245275 Length = 1035 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLTDVGIET 9 K+TD G+E+ Sbjct: 649 KITDYGLES 657>XP_006711406 Length = 1036 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLTDVGIET 9 K+TD G+E+ Sbjct: 650 KITDYGLES 658>XP_006711405 Length = 1062 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLTDVGIET 9 K+TD G+E+ Sbjct: 676 KITDYGLES 684>NP_006454 Length = 424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KLTDVGIE 8 KLTD G+E Sbjct: 378 KLTDHGLE 385>NP_998787 Length = 424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KLTDVGIE 8 KLTD G+E Sbjct: 378 KLTDHGLE 385>NP_964010 Length = 424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KLTDVGIE 8 KLTD G+E Sbjct: 378 KLTDHGLE 385>XP_005264148 Length = 289 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KLTDVGIE 8 KLTD G+E Sbjct: 243 KLTDHGLE 250>XP_005264145 Length = 424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KLTDVGIE 8 KLTD G+E Sbjct: 378 KLTDHGLE 385>XP_006711984 Length = 457 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KLTDVGIE 8 KLTD G+E Sbjct: 425 KLTDHGLE 432>XP_006711983 Length = 471 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KLTDVGIE 8 KLTD G+E Sbjct: 425 KLTDHGLE 432>NP_078948 Length = 903 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KLTDVGI 7 KL+D+GI Sbjct: 360 KLSDIGI 366>XP_006721518 Length = 348 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTDVGI 7 LTDVGI Sbjct: 339 LTDVGI 344>XP_005263278 Length = 620 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KLTDVGI 7 KL+D+GI Sbjct: 77 KLSDIGI 83>XP_005263277 Length = 759 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KLTDVGI 7 KL+D+GI Sbjct: 216 KLSDIGI 222>NP_653303 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KLTDVGIE 8 ++T+VG+E Sbjct: 483 RITEVGLE 490>NP_006759 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLTDVGIET 9 ++TDV IET Sbjct: 68 EMTDVIIET 76>NP_699181 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLTDVGIE 8 K+TD G+E Sbjct: 332 KVTDDGVE 339>NP_001265246 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KLTDVGI 7 ++TDVGI Sbjct: 315 RVTDVGI 321>NP_004681 Length = 1130 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KLTDVGIET 9 KLTD G+ T Sbjct: 843 KLTDFGLCT 851>NP_001010906 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KLTDVGIET 9 K+T++GI + Sbjct: 613 KMTEIGIRS 621>NP_055387 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KLTDVGIET 9 KLTD G+ T Sbjct: 806 KLTDFGLCT 814>NP_036436 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KLTDVGI 7 ++TDVGI Sbjct: 362 RVTDVGI 368>XP_005255189 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLTDVGIE 8 K+TD G+E Sbjct: 332 KVTDDGVE 339>XP_005266399 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KLTDVGIET 9 KLTD G+ T Sbjct: 806 KLTDFGLCT 814>XP_005254001 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLTDVGIET 9 ++TDV IET Sbjct: 109 EMTDVIIET 117>XP_005273560 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KLTDVGIET 9 K+T++GI + Sbjct: 489 KMTEIGIRS 497>XP_005273559 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KLTDVGIET 9 K+T++GI + Sbjct: 518 KMTEIGIRS 526>XP_005273558 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KLTDVGIET 9 K+T++GI + Sbjct: 613 KMTEIGIRS 621>XP_006715666 Length = 886 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KLTDVGIET 9 KLTD G+ T Sbjct: 843 KLTDFGLCT 851>XP_005248330 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KLTDVGI 7 ++TDVGI Sbjct: 357 RVTDVGI 363>XP_006711253 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KLTDVGIE 8 ++T+VG+E Sbjct: 269 RITEVGLE 276>XP_006711252 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KLTDVGIE 8 ++T+VG+E Sbjct: 269 RITEVGLE 276>XP_006711251 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KLTDVGIE 8 ++T+VG+E Sbjct: 390 RITEVGLE 397>XP_006711248 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KLTDVGIE 8 ++T+VG+E Sbjct: 457 RITEVGLE 464>XP_005244983 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KLTDVGIE 8 ++T+VG+E Sbjct: 484 RITEVGLE 491Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.134 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 434,660 Number of extensions: 812 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |