Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 19 665 NP_001035957 19 665 XP_006721991 19 665 XP_006721990 19 665 XP_006721989 19 665 XP_005258041 19 665 XP_006721988 19 665 XP_006721987 19 665 XP_006721986 19 665 XP_005258040 19 665 XP_006721985 19 665 NP_036478 17 2528 NP_057637 17 2528 NP_714941 17 2528 NP_714940 17 2528 NP_001180286 17 2528 NP_940943 17 4312 NP_056083 16 5631 XP_005247302 16 5631 NP_003451 16 7355 NP_055785 16 7355 NP_006286 16 7355 NP_001277033 16 7355 NP_001191446 16 7355 NP_001191445 16 7355 XP_005275347 16 7355 XP_005275078 16 7355 XP_005272926 16 7355 XP_005274943 16 7355 XP_005255619 16 7355 XP_005249419 16 7355 XP_005245027 16 7355 NP_065099 15 9605 NP_001026883 15 9605 NP_064504 15 9605 NP_114159 15 9605 NP_078901 15 9605 NP_072045 15 9605 XP_005250558 15 9605 XP_006714396 15 9605 XP_006714395 15 9605 XP_006714394 15 9605 XP_005263325 15 9605 XP_005263324 15 9605>NP_000258 Length = 2818 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLNANVDS 9 LLNANVDS Sbjct: 1152 LLNANVDS 1159>NP_001035957 Length = 2839 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLNANVDS 9 LLNANVDS Sbjct: 1152 LLNANVDS 1159>XP_006721991 Length = 1632 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLNANVDS 9 LLNANVDS Sbjct: 1162 LLNANVDS 1169>XP_006721990 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLNANVDS 9 LLNANVDS Sbjct: 1162 LLNANVDS 1169>XP_006721989 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLNANVDS 9 LLNANVDS Sbjct: 1162 LLNANVDS 1169>XP_005258041 Length = 2836 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLNANVDS 9 LLNANVDS Sbjct: 1152 LLNANVDS 1159>XP_006721988 Length = 2846 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLNANVDS 9 LLNANVDS Sbjct: 1162 LLNANVDS 1169>XP_006721987 Length = 2849 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLNANVDS 9 LLNANVDS Sbjct: 1162 LLNANVDS 1169>XP_006721986 Length = 2854 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLNANVDS 9 LLNANVDS Sbjct: 1149 LLNANVDS 1156>XP_005258040 Length = 2857 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLNANVDS 9 LLNANVDS Sbjct: 1152 LLNANVDS 1159>XP_006721985 Length = 2867 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLNANVDS 9 LLNANVDS Sbjct: 1162 LLNANVDS 1169>NP_036478 Length = 522 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KLLNANVDS 9 K+LNA++DS Sbjct: 476 KILNAHMDS 484>NP_057637 Length = 522 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KLLNANVDS 9 K+LNA++DS Sbjct: 476 KILNAHMDS 484>NP_714941 Length = 522 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KLLNANVDS 9 K+LNA++DS Sbjct: 476 KILNAHMDS 484>NP_714940 Length = 522 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KLLNANVDS 9 K+LNA++DS Sbjct: 476 KILNAHMDS 484>NP_001180286 Length = 522 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KLLNANVDS 9 K+LNA++DS Sbjct: 476 KILNAHMDS 484>NP_940943 Length = 110 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KLLNANVDS 9 KL+N N DS Sbjct: 89 KLINQNCDS 97>NP_056083 Length = 2243 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLLNANVDS 9 K+LN+N +S Sbjct: 1631 KMLNSNTES 1639>XP_005247302 Length = 2248 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLLNANVDS 9 K+LN+N +S Sbjct: 1636 KMLNSNTES 1644>NP_003451 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLNANVDS 9 LLN NV+S Sbjct: 473 LLNINVES 480>NP_055785 Length = 792 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KLLNANVD 8 K LNAN D Sbjct: 59 KSLNANTD 66>NP_006286 Length = 1264 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KLLNANVD 8 +LLN+N+D Sbjct: 888 QLLNSNLD 895>NP_001277033 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLNANVDS 9 LLN NV+S Sbjct: 464 LLNINVES 471>NP_001191446 Length = 752 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KLLNANVD 8 K LNAN D Sbjct: 19 KSLNANTD 26>NP_001191445 Length = 748 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KLLNANVD 8 K LNAN D Sbjct: 15 KSLNANTD 22>XP_005275347 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KLLNANVD 8 +LLN+N+D Sbjct: 889 QLLNSNLD 896>XP_005275078 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KLLNANVD 8 +LLN+N+D Sbjct: 889 QLLNSNLD 896>XP_005272926 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KLLNANVD 8 +LLN+N+D Sbjct: 889 QLLNSNLD 896>XP_005274943 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KLLNANVD 8 +LLN+N+D Sbjct: 889 QLLNSNLD 896>XP_005255619 Length = 834 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLNANVDS 9 LLN NV+S Sbjct: 562 LLNINVES 569>XP_005249419 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KLLNANVD 8 +LLN+N+D Sbjct: 889 QLLNSNLD 896>XP_005245027 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KLLNANVD 8 K LNAN D Sbjct: 59 KSLNANTD 66>NP_065099 Length = 1286 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KLLNANVD 8 KLLN N D Sbjct: 372 KLLNDNYD 379>NP_001026883 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLLNANVD 8 K+L AN+D Sbjct: 194 KILEANMD 201>NP_064504 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KLLNANVDS 9 K N+NVDS Sbjct: 627 KRKNSNVDS 635>NP_114159 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLLNANVD 8 KL+N+N D Sbjct: 185 KLINSNSD 192>NP_078901 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KLLNANVDS 9 K N+NVDS Sbjct: 627 KRKNSNVDS 635>NP_072045 Length = 152 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KLLNANVD 8 ++LN N+D Sbjct: 14 RVLNTNID 21>XP_005250558 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KLLNANVDS 9 K N+NVDS Sbjct: 749 KRKNSNVDS 757>XP_006714396 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLLNANVD 8 KL+N+N D Sbjct: 185 KLINSNSD 192>XP_006714395 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLLNANVD 8 KL+N+N D Sbjct: 248 KLINSNSD 255>XP_006714394 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLLNANVD 8 KL+N+N D Sbjct: 349 KLINSNSD 356>XP_005263325 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLLNANVD 8 KL+N+N D Sbjct: 349 KLINSNSD 356>XP_005263324 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLLNANVD 8 KL+N+N D Sbjct: 349 KLINSNSD 356Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.122 0.301 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 406,307 Number of extensions: 671 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |