Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155973 20 299 NP_055903 20 299 NP_115818 17 4312 NP_001005408 17 4312 NP_009041 16 5631 NP_663778 16 5631 NP_663777 16 5631 NP_001186356 16 5631 NP_003291 16 5631 XP_006720307 16 5631 XP_005268084 16 5631 NP_653249 16 5631 NP_006420 16 7355 NP_001159757 16 7355 NP_001129588 16 7355 NP_006835 16 7355 XP_005259774 16 7355 XP_005265965 16 7355 NP_996555 15 9605 NP_001241649 15 9605 NP_001241647 15 9605 NP_001241650 15 9605 NP_001241652 15 9605 NP_002456 15 9605 NP_001241651 15 9605 NP_996557 15 9605 NP_001241648 15 9605 NP_996556 15 9605 NP_001019764 15 9605 NP_699193 15 9605 NP_001163894 15 9605 NP_001161846 15 9605 NP_001161849 15 9605 NP_001010986 15 9605 NP_001161848 15 9605 NP_001239257 15 9605 NP_775965 15 9605 NP_055624 15 9605 NP_620138 15 9605 NP_003626 15 9605 NP_001161847 15 9605 XP_006725000 15 9605 XP_006724816 15 9605 XP_006724815 15 9605 XP_006724814 15 9605 XP_005262462 15 9605 XP_006719474 15 9605 XP_005268933 15 9605 XP_006719473 15 9605 XP_006719472 15 9605 XP_006719471 15 9605 XP_006719470 15 9605 XP_006719469 15 9605 XP_006719468 15 9605 XP_005270313 15 9605 XP_005270312 15 9605 XP_006718109 15 9605 XP_006715351 15 9605 XP_006715350 15 9605 XP_006715349 15 9605 XP_005249561 15 9605>NP_001155973 Length = 1833 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KLIVDGSDM 9 K+IVDGSDM Sbjct: 189 KVIVDGSDM 197>NP_055903 Length = 1723 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KLIVDGSDM 9 K+IVDGSDM Sbjct: 189 KVIVDGSDM 197>NP_115818 Length = 1562 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIVDGSDM 9 ++VDG DM Sbjct: 1050 ILVDGEDM 1057>NP_001005408 Length = 1560 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIVDGSDM 9 ++VDG DM Sbjct: 1048 ILVDGEDM 1055>NP_009041 Length = 2627 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LIVDGSD 8 LI+DG+D Sbjct: 1263 LIIDGAD 1269>NP_663778 Length = 543 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLIVDGSDM 9 K+IVD SD+ Sbjct: 532 KVIVDTSDL 540>NP_663777 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLIVDGSDM 9 K+IVD SD+ Sbjct: 557 KVIVDTSDL 565>NP_001186356 Length = 485 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLIVDGSDM 9 K+IVD SD+ Sbjct: 474 KVIVDTSDL 482>NP_003291 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLIVDGSDM 9 K+IVD SD+ Sbjct: 557 KVIVDTSDL 565>XP_006720307 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLIVDGSDM 9 K+IVD SD+ Sbjct: 530 KVIVDTSDL 538>XP_005268084 Length = 2627 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LIVDGSD 8 LI+DG+D Sbjct: 1263 LIIDGAD 1269>NP_653249 Length = 825 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KLIVDGSDM 9 KLI+DG+++ Sbjct: 219 KLILDGNEI 227>NP_006420 Length = 543 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KLIVDG 6 KLIVDG Sbjct: 47 KLIVDG 52>NP_001159757 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KLIVDG 6 KLIVDG Sbjct: 3 KLIVDG 8>NP_001129588 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KLIVDGS 7 KLI+DG+ Sbjct: 106 KLIIDGT 112>NP_006835 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LIVDGSD 8 L+VDG D Sbjct: 464 LVVDGGD 470>XP_005259774 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LIVDGSD 8 L+VDG D Sbjct: 464 LVVDGGD 470>XP_005265965 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KLIVDGS 7 KLI+DG+ Sbjct: 106 KLIIDGT 112>NP_996555 Length = 1148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 548 KIILDGLD 555>NP_001241649 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 511 KIILDGLD 518>NP_001241647 Length = 1173 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 523 KIILDGLD 530>NP_001241650 Length = 1127 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 504 KIILDGLD 511>NP_001241652 Length = 1139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 510 KIILDGLD 517>NP_002456 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 548 KIILDGLD 555>NP_001241651 Length = 1120 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 497 KIILDGLD 504>NP_996557 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 523 KIILDGLD 530>NP_001241648 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 523 KIILDGLD 530>NP_996556 Length = 1141 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 523 KIILDGLD 530>NP_001019764 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KLIVDG 6 KL+VDG Sbjct: 74 KLVVDG 79>NP_699193 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IVDGSDM 9 ++DGS+M Sbjct: 17 LIDGSEM 23>NP_001163894 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IVDGSDM 9 ++DGS+M Sbjct: 17 LIDGSEM 23>NP_001161846 Length = 1063 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IVDGSD 8 ++DGSD Sbjct: 757 VIDGSD 762>NP_001161849 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IVDGSD 8 ++DGSD Sbjct: 766 VIDGSD 771>NP_001010986 Length = 1119 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIVDGSDM 9 LI+DGS + Sbjct: 752 LIIDGSTL 759>NP_001161848 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IVDGSD 8 ++DGSD Sbjct: 721 VIDGSD 726>NP_001239257 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IVDGSD 8 ++DGSD Sbjct: 177 VIDGSD 182>NP_775965 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIVDGSDM 9 LI+DGS + Sbjct: 752 LIIDGSTL 759>NP_055624 Length = 1072 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IVDGSD 8 ++DGSD Sbjct: 766 VIDGSD 771>NP_620138 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VDGSDM 9 +DGSDM Sbjct: 430 LDGSDM 435>NP_003626 Length = 883 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIVDGSDM 9 LIVDG ++ Sbjct: 773 LIVDGQEL 780>NP_001161847 Length = 1072 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IVDGSD 8 ++DGSD Sbjct: 766 VIDGSD 771>XP_006725000 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLIVDGSDM 9 +L +DGSD+ Sbjct: 58 RLSLDGSDI 66>XP_006724816 Length = 1105 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIVDGSDM 9 LI+DGS + Sbjct: 749 LIIDGSTL 756>XP_006724815 Length = 1105 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIVDGSDM 9 LI+DGS + Sbjct: 749 LIIDGSTL 756>XP_006724814 Length = 1116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIVDGSDM 9 LI+DGS + Sbjct: 749 LIIDGSTL 756>XP_005262462 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIVDGSDM 9 LI+DGS + Sbjct: 749 LIIDGSTL 756>XP_006719474 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 523 KIILDGLD 530>XP_005268933 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 536 KIILDGLD 543>XP_006719473 Length = 1166 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 548 KIILDGLD 555>XP_006719472 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 523 KIILDGLD 530>XP_006719471 Length = 1177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 548 KIILDGLD 555>XP_006719470 Length = 1183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 536 KIILDGLD 543>XP_006719469 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 548 KIILDGLD 555>XP_006719468 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLIVDGSD 8 K+I+DG D Sbjct: 548 KIILDGLD 555>XP_005270313 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIVDGSDM 9 LIVDG ++ Sbjct: 399 LIVDGQEL 406>XP_005270312 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIVDGSDM 9 LIVDG ++ Sbjct: 773 LIVDGQEL 780>XP_006718109 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIVDGSDM 9 LIVDG ++ Sbjct: 711 LIVDGQEL 718>XP_006715351 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IVDGSD 8 ++DGSD Sbjct: 614 VIDGSD 619>XP_006715350 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IVDGSD 8 ++DGSD Sbjct: 828 VIDGSD 833>XP_006715349 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IVDGSD 8 ++DGSD Sbjct: 795 VIDGSD 800>XP_005249561 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IVDGSD 8 ++DGSD Sbjct: 828 VIDGSD 833Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.142 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 569,910 Number of extensions: 1214 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |