Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_066958 17 4312 NP_001006933 17 4312 NP_005301 17 4312 NP_001229371 17 4312 NP_001025173 17 4312 NP_001229372 17 4312 XP_005267149 17 4312 XP_006715612 17 4312 NP_003572 16 5631 NP_001004720 16 5631 NP_002944 16 5631 NP_001006666 16 5631 XP_006712860 16 5631 XP_005246023 16 5631 NP_872198 16 7355 NP_055520 16 7355 NP_004746 16 7355 NP_064710 16 7355 XP_005272668 16 7355 XP_005272667 16 7355 XP_006724596 16 7355 XP_005255493 16 7355 XP_006721128 16 7355 XP_005255492 16 7355 XP_005251100 16 7355 XP_006716252 16 7355 XP_006716251 16 7355 NP_004374 15 9605 NP_001120662 15 9605 NP_002199 15 9605 NP_001253989 15 9605 NP_001226 15 9605 NP_001253990 15 9605 NP_001253988 15 9605 NP_055563 15 9605 NP_001257863 15 9605 NP_001193943 15 9605 NP_055605 15 9605 NP_001257870 15 9605 NP_001269211 15 9605 NP_647611 15 9605 NP_647612 15 9605 NP_002369 15 9605 XP_005254222 15 9605 XP_006718792 15 9605 XP_006718791 15 9605 XP_006718790 15 9605>NP_066958 Length = 733 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KLFLVREVQ 9 K+FLVR+V+ Sbjct: 72 KVFLVRKVK 80>NP_001006933 Length = 741 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KLFLVREVQ 9 K+FLVR+V+ Sbjct: 80 KVFLVRKVK 88>NP_005301 Length = 532 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LFLVREVQ 9 LFLVRE Q Sbjct: 454 LFLVRESQ 461>NP_001229371 Length = 555 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LFLVREVQ 9 LFLVRE Q Sbjct: 477 LFLVRESQ 484>NP_001025173 Length = 532 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LFLVREVQ 9 LFLVRE Q Sbjct: 454 LFLVRESQ 461>NP_001229372 Length = 532 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LFLVREVQ 9 LFLVRE Q Sbjct: 454 LFLVRESQ 461>XP_005267149 Length = 758 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KLFLVREVQ 9 K+FLVR+V+ Sbjct: 97 KVFLVRKVK 105>XP_006715612 Length = 761 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KLFLVREVQ 9 K+FLVR+V+ Sbjct: 100 KVFLVRKVK 108>NP_003572 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLFLVREVQ 9 KL+LVR +Q Sbjct: 372 KLYLVRALQ 380>NP_001004720 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLFLVREVQ 9 KL+LVR +Q Sbjct: 372 KLYLVRALQ 380>NP_002944 Length = 735 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KLFLVREV 8 K+FLVR+V Sbjct: 75 KVFLVRKV 82>NP_001006666 Length = 744 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KLFLVREV 8 K+FLVR+V Sbjct: 84 KVFLVRKV 91>XP_006712860 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLFLVREVQ 9 KL+LVR +Q Sbjct: 372 KLYLVRALQ 380>XP_005246023 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KLFLVREV 8 K+FLVR+V Sbjct: 59 KVFLVRKV 66>NP_872198 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KLFLVREV 8 K+FLVR++ Sbjct: 62 KVFLVRKI 69>NP_055520 Length = 1966 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KLFLVREV 8 KLF VREV Sbjct: 776 KLFDVREV 783>NP_004746 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KLFLVREV 8 K+FLVR++ Sbjct: 62 KVFLVRKI 69>NP_064710 Length = 1052 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LFLVREV 8 LFLVRE+ Sbjct: 884 LFLVREL 890>XP_005272668 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KLFLVRE 7 KLFL+R+ Sbjct: 78 KLFLIRD 84>XP_005272667 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KLFLVRE 7 KLFL+R+ Sbjct: 78 KLFLIRD 84>XP_006724596 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KLFLVRE 7 KLFL+R+ Sbjct: 78 KLFLIRD 84>XP_005255493 Length = 959 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LFLVREV 8 LFLVRE+ Sbjct: 791 LFLVREL 797>XP_006721128 Length = 985 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LFLVREV 8 LFLVRE+ Sbjct: 817 LFLVREL 823>XP_005255492 Length = 1026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LFLVREV 8 LFLVRE+ Sbjct: 858 LFLVREL 864>XP_005251100 Length = 2103 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLFLVREVQ 9 K+F VREV+ Sbjct: 2087 KVFKVREVR 2095>XP_006716252 Length = 1937 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KLFLVREV 8 KLF VREV Sbjct: 776 KLFDVREV 783>XP_006716251 Length = 1975 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KLFLVREV 8 KLF VREV Sbjct: 776 KLFDVREV 783>NP_004374 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LFLVRE 7 LFLVRE Sbjct: 103 LFLVRE 108>NP_001120662 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LFLVRE 7 LFLVRE Sbjct: 103 LFLVRE 108>NP_002199 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KLFLVREVQ 9 KLF V E+Q Sbjct: 826 KLFCVAELQ 834>NP_001253989 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LFLVRE 7 LFLVRE Sbjct: 137 LFLVRE 142>NP_001226 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLVREVQ 9 +FLVR+ Q Sbjct: 389 IFLVRDTQ 396>NP_001253990 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LFLVRE 7 LFLVRE Sbjct: 142 LFLVRE 147>NP_001253988 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LFLVRE 7 LFLVRE Sbjct: 150 LFLVRE 155>NP_055563 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LFLVRE 7 LFLVRE Sbjct: 162 LFLVRE 167>NP_001257863 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLFLVREVQ 9 +LFLV+E + Sbjct: 247 QLFLVKEAE 255>NP_001193943 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLVREVQ 9 +FLVR+ Q Sbjct: 389 IFLVRDTQ 396>NP_055605 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLFLVREVQ 9 +LFLV+E + Sbjct: 247 QLFLVKEAE 255>NP_001257870 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLFLVREVQ 9 +LFLV+E + Sbjct: 247 QLFLVKEAE 255>NP_001269211 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLFLVREVQ 9 +LFLV+E + Sbjct: 205 QLFLVKEAE 213>NP_647611 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LFLVRE 7 LFLVRE Sbjct: 102 LFLVRE 107>NP_647612 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LFLVRE 7 LFLVRE Sbjct: 143 LFLVRE 148>NP_002369 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LFLVRE 7 LFLVRE Sbjct: 144 LFLVRE 149>XP_005254222 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LFLVRE 7 LFLVRE Sbjct: 103 LFLVRE 108>XP_006718792 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLVREVQ 9 +FLVR+ Q Sbjct: 389 IFLVRDTQ 396>XP_006718791 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLVREVQ 9 +FLVR+ Q Sbjct: 389 IFLVRDTQ 396>XP_006718790 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLVREVQ 9 +FLVR+ Q Sbjct: 389 IFLVRDTQ 396Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.152 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 434,094 Number of extensions: 606 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |