Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 20 299 NP_858045 20 299 NP_006525 20 299 NP_001167559 20 299 NP_919263 18 1482 XP_006720118 18 1482 XP_006720117 18 1482 XP_006720116 18 1482 XP_005267417 18 1482 NP_078837 17 2528 NP_733751 17 2528 XP_005266580 17 2528 XP_005266579 17 2528 XP_006719929 17 2528 XP_006716142 17 2528 XP_005250088 17 2528 XP_006716141 17 2528 XP_005250085 17 2528 XP_006716140 17 2528 XP_005250084 17 2528 XP_005250083 17 2528 XP_005250082 17 2528 NP_000954 17 4312 NP_078858 17 4312 NP_001278232 17 4312 NP_001278214 17 4312 NP_001860 17 4312 NP_003292 16 5631 NP_001161707 16 5631 NP_055514 16 7355 NP_005119 16 7355 XP_006724131 16 7355 XP_005255769 16 7355 XP_005255768 16 7355 XP_005255767 16 7355 NP_001276627 15 9605 NP_001122087 15 9605 NP_062455 15 9605 NP_001122088 15 9605 NP_997244 15 9605 NP_612388 15 9605 NP_003081 15 9605 NP_001140198 15 9605 NP_065976 15 9605 NP_055568 15 9605 NP_775105 15 9605 NP_689484 15 9605 NP_631938 15 9605 NP_006687 15 9605 NP_001036148 15 9605 NP_001157798 15 9605 XP_005271905 15 9605 XP_005271904 15 9605 XP_005271903 15 9605 XP_005273742 15 9605 XP_006715506 15 9605 XP_006715505 15 9605 XP_006715504 15 9605 XP_006715503 15 9605 XP_006715502 15 9605 XP_005271918 15 9605 XP_006714588 15 9605 XP_005271917 15 9605 XP_005271912 15 9605 XP_005271916 15 9605 XP_005271914 15 9605 XP_006714587 15 9605 XP_005271913 15 9605 XP_005263127 15 9605 XP_005265245 15 9605 XP_005265244 15 9605 XP_005265243 15 9605 NP_061908 15 9605>NP_001167558 Length = 1423 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLFLNPVTN 9 KLF NPVTN Sbjct: 350 KLFRNPVTN 358>NP_858045 Length = 1424 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLFLNPVTN 9 KLF NPVTN Sbjct: 350 KLFRNPVTN 358>NP_006525 Length = 1420 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLFLNPVTN 9 KLF NPVTN Sbjct: 350 KLFRNPVTN 358>NP_001167559 Length = 1415 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLFLNPVTN 9 KLF NPVTN Sbjct: 360 KLFRNPVTN 368>NP_919263 Length = 488 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KLFLNPV 7 KLFLNP+ Sbjct: 336 KLFLNPI 342>XP_006720118 Length = 248 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KLFLNPV 7 KLFLNP+ Sbjct: 96 KLFLNPI 102>XP_006720117 Length = 396 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KLFLNPV 7 KLFLNP+ Sbjct: 244 KLFLNPI 250>XP_006720116 Length = 396 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KLFLNPV 7 KLFLNP+ Sbjct: 244 KLFLNPI 250>XP_005267417 Length = 471 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KLFLNPV 7 KLFLNP+ Sbjct: 319 KLFLNPI 325>NP_078837 Length = 864 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLFLNPVTN 9 KL+ NP+TN Sbjct: 567 KLYDNPLTN 575>NP_733751 Length = 4911 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 LF+ PVTN Sbjct: 2189 LFVTPVTN 2196>XP_005266580 Length = 452 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLFLNPVTN 9 KL+ NP+TN Sbjct: 155 KLYDNPLTN 163>XP_005266579 Length = 653 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLFLNPVTN 9 KL+ NP+TN Sbjct: 567 KLYDNPLTN 575>XP_006719929 Length = 804 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLFLNPVTN 9 KL+ NP+TN Sbjct: 507 KLYDNPLTN 515>XP_006716142 Length = 4927 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 LF+ PVTN Sbjct: 2206 LFVTPVTN 2213>XP_005250088 Length = 4928 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 LF+ PVTN Sbjct: 2206 LFVTPVTN 2213>XP_006716141 Length = 4959 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 LF+ PVTN Sbjct: 2206 LFVTPVTN 2213>XP_005250085 Length = 4979 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 LF+ PVTN Sbjct: 2206 LFVTPVTN 2213>XP_006716140 Length = 4982 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 LF+ PVTN Sbjct: 2206 LFVTPVTN 2213>XP_005250084 Length = 4982 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 LF+ PVTN Sbjct: 2206 LFVTPVTN 2213>XP_005250083 Length = 4982 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 LF+ PVTN Sbjct: 2205 LFVTPVTN 2212>XP_005250082 Length = 4983 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 LF+ PVTN Sbjct: 2206 LFVTPVTN 2213>NP_000954 Length = 604 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KLFLNPVTN 9 KLFL P N Sbjct: 64 KLFLKPTPN 72>NP_078858 Length = 4981 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FLNPVT 8 FLNP+T Sbjct: 1890 FLNPIT 1895>NP_001278232 Length = 4983 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FLNPVT 8 FLNP+T Sbjct: 1890 FLNPIT 1895>NP_001278214 Length = 4982 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FLNPVT 8 FLNP+T Sbjct: 1890 FLNPIT 1895>NP_001860 Length = 419 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 +FL PVTN Sbjct: 215 IFLLPVTN 222>NP_003292 Length = 398 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LFLNPV 7 LFLNP+ Sbjct: 218 LFLNPI 223>NP_001161707 Length = 2139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LFLNPVTN 9 LFL PV N Sbjct: 820 LFLQPVDN 827>NP_055514 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KLFLNPV 7 K FLNPV Sbjct: 1564 KEFLNPV 1570>NP_005119 Length = 2298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FLNPVT 8 FLNP+T Sbjct: 1675 FLNPLT 1680>XP_006724131 Length = 2298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FLNPVT 8 FLNP+T Sbjct: 1675 FLNPLT 1680>XP_005255769 Length = 1808 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KLFLNPV 7 K FLNPV Sbjct: 1564 KEFLNPV 1570>XP_005255768 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KLFLNPV 7 K FLNPV Sbjct: 1564 KEFLNPV 1570>XP_005255767 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KLFLNPV 7 K FLNPV Sbjct: 1564 KEFLNPV 1570>NP_001276627 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FLNPVT 8 FLNP T Sbjct: 473 FLNPTT 478>NP_001122087 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FLNPVT 8 FLNP T Sbjct: 499 FLNPTT 504>NP_062455 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FLNPVT 8 FLNP T Sbjct: 467 FLNPTT 472>NP_001122088 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FLNPVT 8 FLNP T Sbjct: 473 FLNPTT 478>NP_997244 Length = 3169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 L+L+PV N Sbjct: 820 LYLHPVDN 827>NP_612388 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 L+L PVT+ Sbjct: 17 LYLTPVTS 24>NP_003081 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NPVTN 9 NPVTN Sbjct: 123 NPVTN 127>NP_001140198 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 L+L PVT+ Sbjct: 17 LYLTPVTS 24>NP_065976 Length = 1223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KLFLNPVTN 9 K FL+P T+ Sbjct: 232 KTFLSPATS 240>NP_055568 Length = 1282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FLNPVTN 9 F NPVT+ Sbjct: 1109 FYNPVTS 1115>NP_775105 Length = 1659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KLFLNPVT 8 KL+ NP T Sbjct: 345 KLYYNPYT 352>NP_689484 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KLFLNPVT 8 +LF PVT Sbjct: 484 RLFFEPVT 491>NP_631938 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 +FL PVT+ Sbjct: 731 VFLQPVTD 738>NP_006687 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 +FL PVT+ Sbjct: 804 VFLQPVTD 811>NP_001036148 Length = 1683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KLFLNPVT 8 KL+ NP T Sbjct: 345 KLYYNPYT 352>NP_001157798 Length = 866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 +FL PVT+ Sbjct: 734 VFLQPVTD 741>XP_005271905 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FLNPVTN 9 F NPVT+ Sbjct: 1046 FYNPVTS 1052>XP_005271904 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FLNPVTN 9 F NPVT+ Sbjct: 1046 FYNPVTS 1052>XP_005271903 Length = 1282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FLNPVTN 9 F NPVT+ Sbjct: 1109 FYNPVTS 1115>XP_005273742 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KLFLNPVT 8 +LF PVT Sbjct: 473 RLFFEPVT 480>XP_006715506 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KLFLNPVT 8 KL+ NP T Sbjct: 345 KLYYNPYT 352>XP_006715505 Length = 1673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KLFLNPVT 8 KL+ NP T Sbjct: 345 KLYYNPYT 352>XP_006715504 Length = 1683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KLFLNPVT 8 KL+ NP T Sbjct: 345 KLYYNPYT 352>XP_006715503 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KLFLNPVT 8 KL+ NP T Sbjct: 345 KLYYNPYT 352>XP_006715502 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KLFLNPVT 8 KL+ NP T Sbjct: 345 KLYYNPYT 352>XP_005271918 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 +FL PVT+ Sbjct: 731 VFLQPVTD 738>XP_006714588 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 +FL PVT+ Sbjct: 765 VFLQPVTD 772>XP_005271917 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 +FL PVT+ Sbjct: 804 VFLQPVTD 811>XP_005271912 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 +FL PVT+ Sbjct: 804 VFLQPVTD 811>XP_005271916 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 +FL PVT+ Sbjct: 661 VFLQPVTD 668>XP_005271914 Length = 1238 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 +FL PVT+ Sbjct: 734 VFLQPVTD 741>XP_006714587 Length = 1269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 +FL PVT+ Sbjct: 765 VFLQPVTD 772>XP_005271913 Length = 1293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFLNPVTN 9 +FL PVT+ Sbjct: 804 VFLQPVTD 811>XP_005263127 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 FLNPVTN 9 F NP TN Sbjct: 1061 FQNPTTN 1067>XP_005265245 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FLNPVT 8 FLNP T Sbjct: 479 FLNPTT 484>XP_005265244 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FLNPVT 8 FLNP T Sbjct: 499 FLNPTT 504>XP_005265243 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FLNPVT 8 FLNP T Sbjct: 499 FLNPTT 504>NP_061908 Length = 1135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 FLNPVTN 9 F NP TN Sbjct: 1062 FQNPTTN 1068Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.141 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 736,793 Number of extensions: 980 Number of successful extensions: 73 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |