Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 19 869 NP_000242 19 869 XP_005264389 19 869 NP_006217 17 3301 XP_005246701 17 3301 XP_005246700 17 3301 NP_598328 17 4312 NP_003169 17 4312 NP_001129246 17 4312 XP_006713376 17 4312 XP_006713375 17 4312 XP_006713374 17 4312 NP_003481 17 4312 NP_598344 17 4312 NP_631938 16 5631 NP_006687 16 5631 NP_001157798 16 5631 XP_005271922 16 5631 XP_005271921 16 5631 XP_005271918 16 5631 XP_006714588 16 5631 XP_005271917 16 5631 XP_005271912 16 5631 XP_005271916 16 5631 XP_005271914 16 5631 XP_006714587 16 5631 XP_005271913 16 5631 NP_071445 16 7355 XP_006721306 16 7355 XP_006721305 16 7355 XP_005256141 16 7355 NP_524144 15 9605 NP_001164509 15 9605 NP_004034 15 9605 NP_443148 15 9605 XP_006721725 15 9605 XP_005257064 15 9605 XP_006721724 15 9605 XP_006721723 15 9605 NP_001164510 15 9605>NP_001245210 Length = 868 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KLDIAAVKA 9 KLDIAAV+A Sbjct: 235 KLDIAAVRA 243>NP_000242 Length = 934 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KLDIAAVKA 9 KLDIAAV+A Sbjct: 301 KLDIAAVRA 309>XP_005264389 Length = 921 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KLDIAAVKA 9 KLDIAAV+A Sbjct: 301 KLDIAAVRA 309>NP_006217 Length = 1095 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KLDIAAVK 8 KLDI+A+K Sbjct: 157 KLDISAIK 164>XP_005246701 Length = 1016 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KLDIAAVK 8 KLDI+A+K Sbjct: 78 KLDISAIK 85>XP_005246700 Length = 1021 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KLDIAAVK 8 KLDI+A+K Sbjct: 83 KLDISAIK 90>NP_598328 Length = 582 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LDI AVKA Sbjct: 367 LDICAVKA 374>NP_003169 Length = 478 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LDI AVKA Sbjct: 367 LDICAVKA 374>NP_001129246 Length = 579 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LDI AVKA Sbjct: 345 LDICAVKA 352>XP_006713376 Length = 325 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LDI AVKA Sbjct: 110 LDICAVKA 117>XP_006713375 Length = 421 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LDI AVKA Sbjct: 206 LDICAVKA 213>XP_006713374 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LDI AVKA Sbjct: 367 LDICAVKA 374>NP_003481 Length = 580 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LDI AVKA Sbjct: 346 LDICAVKA 353>NP_598344 Length = 444 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LDI AVKA Sbjct: 346 LDICAVKA 353>NP_631938 Length = 1235 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDIAAVKA 9 LD+AAV+A Sbjct: 434 LDVAAVEA 441>NP_006687 Length = 951 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDIAAVKA 9 LD+AAV+A Sbjct: 507 LDVAAVEA 514>NP_001157798 Length = 866 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDIAAVKA 9 LD+AAV+A Sbjct: 437 LDVAAVEA 444>XP_005271922 Length = 685 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDIAAVKA 9 LD+AAV+A Sbjct: 507 LDVAAVEA 514>XP_005271921 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDIAAVKA 9 LD+AAV+A Sbjct: 507 LDVAAVEA 514>XP_005271918 Length = 878 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDIAAVKA 9 LD+AAV+A Sbjct: 434 LDVAAVEA 441>XP_006714588 Length = 897 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDIAAVKA 9 LD+AAV+A Sbjct: 468 LDVAAVEA 475>XP_005271917 Length = 936 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDIAAVKA 9 LD+AAV+A Sbjct: 507 LDVAAVEA 514>XP_005271912 Length = 1308 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDIAAVKA 9 LD+AAV+A Sbjct: 507 LDVAAVEA 514>XP_005271916 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDIAAVKA 9 LD+AAV+A Sbjct: 364 LDVAAVEA 371>XP_005271914 Length = 1238 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDIAAVKA 9 LD+AAV+A Sbjct: 437 LDVAAVEA 444>XP_006714587 Length = 1269 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDIAAVKA 9 LD+AAV+A Sbjct: 468 LDVAAVEA 475>XP_005271913 Length = 1293 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LDIAAVKA 9 LD+AAV+A Sbjct: 507 LDVAAVEA 514>NP_071445 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LD+A VKA Sbjct: 185 LDLATVKA 192>XP_006721306 Length = 793 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LD+A VKA Sbjct: 158 LDLATVKA 165>XP_006721305 Length = 985 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LD+A VKA Sbjct: 158 LDLATVKA 165>XP_005256141 Length = 1013 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LD+A VKA Sbjct: 158 LDLATVKA 165>NP_524144 Length = 194 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KLDIAAVK 8 K+D++A+K Sbjct: 37 KIDLSAIK 44>NP_001164509 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LD+AAV A Sbjct: 44 LDVAAVAA 51>NP_004034 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LD+AAV A Sbjct: 44 LDVAAVAA 51>NP_443148 Length = 679 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DIAAVKA 9 DIA+VKA Sbjct: 622 DIASVKA 628>XP_006721725 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DIAAVKA 9 DIA+VKA Sbjct: 556 DIASVKA 562>XP_005257064 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DIAAVKA 9 DIA+VKA Sbjct: 622 DIASVKA 628>XP_006721724 Length = 654 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DIAAVKA 9 DIA+VKA Sbjct: 623 DIASVKA 629>XP_006721723 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DIAAVKA 9 DIA+VKA Sbjct: 623 DIASVKA 629>NP_001164510 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDIAAVKA 9 LD+AAV A Sbjct: 44 LDVAAVAA 51Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.128 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 294,125 Number of extensions: 232 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |