Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_066958 16 5631 NP_001006933 16 5631 NP_002944 16 5631 NP_001006666 16 5631 XP_005267149 16 5631 XP_006715612 16 5631 XP_005246023 16 5631 NP_872198 16 7355 NP_055520 16 7355 NP_008937 16 7355 NP_004746 16 7355 NP_064710 16 7355 XP_005272668 16 7355 XP_005272667 16 7355 XP_006724596 16 7355 XP_005255493 16 7355 XP_006721128 16 7355 XP_005255492 16 7355 XP_005251100 16 7355 XP_006716252 16 7355 XP_006716251 16 7355 NP_004374 15 9605 NP_001120662 15 9605 NP_001161328 15 9605 NP_060653 15 9605 NP_001253989 15 9605 NP_001253990 15 9605 NP_001253988 15 9605 NP_055563 15 9605 NP_005301 15 9605 NP_001269340 15 9605 NP_002703 15 9605 NP_001269338 15 9605 NP_001269343 15 9605 NP_001269339 15 9605 NP_001269342 15 9605 NP_001275990 15 9605 NP_001275987 15 9605 NP_647611 15 9605 NP_647612 15 9605 NP_001269341 15 9605 NP_112168 15 9605 NP_002369 15 9605 NP_001229371 15 9605 NP_001025173 15 9605 NP_001229372 15 9605 XP_006724172 15 9605 XP_006724171 15 9605 XP_006724170 15 9605 XP_005254222 15 9605 XP_005253633 15 9605 XP_005253632 15 9605 XP_006719537 15 9605 XP_006719536 15 9605 XP_005253630 15 9605 XP_005253629 15 9605 XP_006718343 15 9605 XP_006718342 15 9605 XP_006718341 15 9605 NP_689449 15 9605>NP_066958 Length = 733 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KLFLVREV 9 K+FLVR+V Sbjct: 72 KVFLVRKV 79>NP_001006933 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KLFLVREV 9 K+FLVR+V Sbjct: 80 KVFLVRKV 87>NP_002944 Length = 735 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KLFLVREV 9 K+FLVR+V Sbjct: 75 KVFLVRKV 82>NP_001006666 Length = 744 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KLFLVREV 9 K+FLVR+V Sbjct: 84 KVFLVRKV 91>XP_005267149 Length = 758 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KLFLVREV 9 K+FLVR+V Sbjct: 97 KVFLVRKV 104>XP_006715612 Length = 761 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KLFLVREV 9 K+FLVR+V Sbjct: 100 KVFLVRKV 107>XP_005246023 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KLFLVREV 9 K+FLVR+V Sbjct: 59 KVFLVRKV 66>NP_872198 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLFLVREV 9 K+FLVR++ Sbjct: 62 KVFLVRKI 69>NP_055520 Length = 1966 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KLFLVREV 9 KLF VREV Sbjct: 776 KLFDVREV 783>NP_008937 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KKLFLVR 7 KKLFLV+ Sbjct: 172 KKLFLVQ 178>NP_004746 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLFLVREV 9 K+FLVR++ Sbjct: 62 KVFLVRKI 69>NP_064710 Length = 1052 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LFLVREV 9 LFLVRE+ Sbjct: 884 LFLVREL 890>XP_005272668 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLFLVRE 8 KLFL+R+ Sbjct: 78 KLFLIRD 84>XP_005272667 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLFLVRE 8 KLFL+R+ Sbjct: 78 KLFLIRD 84>XP_006724596 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLFLVRE 8 KLFL+R+ Sbjct: 78 KLFLIRD 84>XP_005255493 Length = 959 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LFLVREV 9 LFLVRE+ Sbjct: 791 LFLVREL 797>XP_006721128 Length = 985 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LFLVREV 9 LFLVRE+ Sbjct: 817 LFLVREL 823>XP_005255492 Length = 1026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LFLVREV 9 LFLVRE+ Sbjct: 858 LFLVREL 864>XP_005251100 Length = 2103 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KKLFLVREV 9 +K+F VREV Sbjct: 2086 EKVFKVREV 2094>XP_006716252 Length = 1937 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KLFLVREV 9 KLF VREV Sbjct: 776 KLFDVREV 783>XP_006716251 Length = 1975 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KLFLVREV 9 KLF VREV Sbjct: 776 KLFDVREV 783>NP_004374 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFLVRE 8 LFLVRE Sbjct: 103 LFLVRE 108>NP_001120662 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFLVRE 8 LFLVRE Sbjct: 103 LFLVRE 108>NP_001161328 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 1228 KKLFLV 1233>NP_060653 Length = 1392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 1227 KKLFLV 1232>NP_001253989 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFLVRE 8 LFLVRE Sbjct: 137 LFLVRE 142>NP_001253990 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFLVRE 8 LFLVRE Sbjct: 142 LFLVRE 147>NP_001253988 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFLVRE 8 LFLVRE Sbjct: 150 LFLVRE 155>NP_055563 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFLVRE 8 LFLVRE Sbjct: 162 LFLVRE 167>NP_005301 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFLVRE 8 LFLVRE Sbjct: 454 LFLVRE 459>NP_001269340 Length = 237 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 124 KKLFLV 129>NP_002703 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 167 KKLFLV 172>NP_001269338 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 124 KKLFLV 129>NP_001269343 Length = 221 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 108 KKLFLV 113>NP_001269339 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 167 KKLFLV 172>NP_001269342 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 108 KKLFLV 113>NP_001275990 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKLFLVREV 9 KK++LV E+ Sbjct: 186 KKMYLVMEL 194>NP_001275987 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKLFLVREV 9 KK++LV E+ Sbjct: 145 KKMYLVMEL 153>NP_647611 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFLVRE 8 LFLVRE Sbjct: 102 LFLVRE 107>NP_647612 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFLVRE 8 LFLVRE Sbjct: 143 LFLVRE 148>NP_001269341 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 151 KKLFLV 156>NP_112168 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKLFLVREV 9 KK++LV E+ Sbjct: 186 KKMYLVMEL 194>NP_002369 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFLVRE 8 LFLVRE Sbjct: 144 LFLVRE 149>NP_001229371 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFLVRE 8 LFLVRE Sbjct: 477 LFLVRE 482>NP_001025173 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFLVRE 8 LFLVRE Sbjct: 454 LFLVRE 459>NP_001229372 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFLVRE 8 LFLVRE Sbjct: 454 LFLVRE 459>XP_006724172 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KKLFLVREV 9 KKL LVR V Sbjct: 84 KKLQLVRRV 92>XP_006724171 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KKLFLVREV 9 KKL LVR V Sbjct: 84 KKLQLVRRV 92>XP_006724170 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KKLFLVREV 9 KKL LVR V Sbjct: 84 KKLQLVRRV 92>XP_005254222 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFLVRE 8 LFLVRE Sbjct: 103 LFLVRE 108>XP_005253633 Length = 1392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 1227 KKLFLV 1232>XP_005253632 Length = 1392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 1227 KKLFLV 1232>XP_006719537 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 1228 KKLFLV 1233>XP_006719536 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 1228 KKLFLV 1233>XP_005253630 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 1228 KKLFLV 1233>XP_005253629 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KKLFLV 6 KKLFLV Sbjct: 1228 KKLFLV 1233>XP_006718343 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKLFLVREV 9 KK++LV E+ Sbjct: 145 KKMYLVMEL 153>XP_006718342 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKLFLVREV 9 KK++LV E+ Sbjct: 186 KKMYLVMEL 194>XP_006718341 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKLFLVREV 9 KK++LV E+ Sbjct: 145 KKMYLVMEL 153>NP_689449 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KKLFLVREV 9 KKL LVR V Sbjct: 84 KKLQLVRRV 92Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.153 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 437,864 Number of extensions: 772 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |