Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 19 869 NP_776175 17 4312 NP_001137307 17 4312 NP_057232 17 4312 NP_006156 17 4312 XP_006723297 17 4312 XP_006723296 17 4312 XP_005259020 17 4312 XP_005254368 17 4312 XP_006720536 17 4312 XP_006720120 17 4312 XP_006720119 17 4312 XP_005271626 17 4312 XP_005271625 17 4312 XP_005271624 17 4312 XP_005271623 17 4312 XP_005271622 17 4312 NP_689659 17 4312 NP_060220 16 5631 NP_061927 16 5631 XP_006717968 16 5631 XP_006717967 16 5631 XP_006717966 16 5631 XP_006717965 16 5631 NP_001274420 16 7355 NP_001121685 16 7355 NP_001121684 16 7355 NP_001275896 16 7355 NP_001275894 16 7355 NP_077817 16 7355 NP_001275893 16 7355 XP_005247863 16 7355 XP_006712405 16 7355 XP_006712404 16 7355 XP_005246413 16 7355 XP_005264244 16 7355 NP_689741 16 7355 NP_061853 15 9605 NP_036473 15 9605 XP_006725006 15 9605 XP_006717500 15 9605 NP_005859 15 9605>NP_005219 Length = 1210 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KKIKVLSSG 9 KKIKVL SG Sbjct: 713 KKIKVLGSG 721>NP_776175 Length = 1150 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KKIKVLSSG 9 K+I+VLS+G Sbjct: 83 KRIEVLSNG 91>NP_001137307 Length = 1299 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IKVLSSG 9 IKVLSSG Sbjct: 695 IKVLSSG 701>NP_057232 Length = 2161 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KKIKVLSSG 9 +KIKVLS G Sbjct: 579 EKIKVLSIG 587>NP_006156 Length = 1324 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IKVLSSG 9 IKVLSSG Sbjct: 720 IKVLSSG 726>XP_006723297 Length = 2152 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KKIKVLSSG 9 +KIKVLS G Sbjct: 579 EKIKVLSIG 587>XP_006723296 Length = 2161 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KKIKVLSSG 9 +KIKVLS G Sbjct: 579 EKIKVLSIG 587>XP_005259020 Length = 2169 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KKIKVLSSG 9 +KIKVLS G Sbjct: 579 EKIKVLSIG 587>XP_005254368 Length = 712 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KKIKVLSSG 9 K+I+VLS+G Sbjct: 83 KRIEVLSNG 91>XP_006720536 Length = 1072 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KKIKVLSSG 9 K+I+VLS+G Sbjct: 5 KRIEVLSNG 13>XP_006720120 Length = 1055 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KKIKVLSSG 9 +K+KV SSG Sbjct: 809 EKLKVFSSG 817>XP_006720119 Length = 1094 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KKIKVLSSG 9 +K+KV SSG Sbjct: 848 EKLKVFSSG 856>XP_005271626 Length = 1294 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IKVLSSG 9 IKVLSSG Sbjct: 779 IKVLSSG 785>XP_005271625 Length = 1311 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IKVLSSG 9 IKVLSSG Sbjct: 707 IKVLSSG 713>XP_005271624 Length = 1311 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IKVLSSG 9 IKVLSSG Sbjct: 707 IKVLSSG 713>XP_005271623 Length = 1371 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IKVLSSG 9 IKVLSSG Sbjct: 767 IKVLSSG 773>XP_005271622 Length = 1383 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IKVLSSG 9 IKVLSSG Sbjct: 779 IKVLSSG 785>NP_689659 Length = 1094 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KKIKVLSSG 9 +K+KV SSG Sbjct: 848 EKLKVFSSG 856>NP_060220 Length = 610 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KKIKVLSSG 9 K +KV+SSG Sbjct: 196 KLVKVVSSG 204>NP_061927 Length = 835 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KKIKVLSSG 9 KK+K++S+G Sbjct: 400 KKMKLISNG 408>XP_006717968 Length = 952 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KKIKVLSSG 9 KK+K++S+G Sbjct: 400 KKMKLISNG 408>XP_006717967 Length = 952 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KKIKVLSSG 9 KK+K++S+G Sbjct: 400 KKMKLISNG 408>XP_006717966 Length = 952 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KKIKVLSSG 9 KK+K++S+G Sbjct: 400 KKMKLISNG 408>XP_006717965 Length = 958 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KKIKVLSSG 9 KK+K++S+G Sbjct: 406 KKMKLISNG 414>NP_001274420 Length = 1795 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KKIKVLSSG 9 K+IK+ SSG Sbjct: 755 KQIKIESSG 763>NP_001121685 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIKVLSSG 9 K+K LSSG Sbjct: 396 KVKSLSSG 403>NP_001121684 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIKVLSSG 9 K+K LSSG Sbjct: 396 KVKSLSSG 403>NP_001275896 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KKIKVLS 7 KK+KVLS Sbjct: 438 KKLKVLS 444>NP_001275894 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KKIKVLS 7 KK+KVLS Sbjct: 570 KKLKVLS 576>NP_077817 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KKIKVLS 7 KK+KVLS Sbjct: 590 KKLKVLS 596>NP_001275893 Length = 579 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KKIKVLS 7 KK+KVLS Sbjct: 572 KKLKVLS 578>XP_005247863 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KKIKVLS 7 KK+KVLS Sbjct: 590 KKLKVLS 596>XP_006712405 Length = 238 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIKVLSSG 9 K+K LSSG Sbjct: 158 KVKSLSSG 165>XP_006712404 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIKVLSSG 9 K+K LSSG Sbjct: 227 KVKSLSSG 234>XP_005246413 Length = 384 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIKVLSSG 9 K+K LSSG Sbjct: 304 KVKSLSSG 311>XP_005264244 Length = 1795 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KKIKVLSSG 9 K+IK+ SSG Sbjct: 755 KQIKIESSG 763>NP_689741 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIKVLSSG 9 K+K LSSG Sbjct: 396 KVKSLSSG 403>NP_061853 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KKIKVLSSG 9 KK+KV S+G Sbjct: 200 KKMKVHSAG 208>NP_036473 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKIKVLSS 8 KK+K+L S Sbjct: 491 KKLKILES 498>XP_006725006 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKIKVLSS 8 KK+K+L S Sbjct: 444 KKLKILQS 451>XP_006717500 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKIKVLSS 8 KK+K+L S Sbjct: 396 KKLKILES 403>NP_005859 Length = 118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KIKVLSSG 9 K+K+LS G Sbjct: 84 KLKILSRG 91Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.126 0.296 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 400,129 Number of extensions: 450 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |