Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 21 175 XP_006715292 21 175 NP_775771 20 509 XP_006720466 20 509 XP_005254230 20 509 XP_006720465 20 509 XP_005254228 20 509 NP_872348 17 2528 NP_001193856 17 2528 XP_006715067 17 2528 NP_037486 17 3301 NP_473367 17 3301 XP_005273538 17 3301 NP_478136 17 4312 NP_001229392 17 4312 XP_006726440 17 4312 XP_005266090 17 4312 XP_005266088 17 4312 XP_005266087 17 4312 XP_005266086 17 4312 XP_006711917 17 4312 NP_904357 17 4312 NP_904356 17 4312 NP_036305 17 4312 NP_061178 16 5631 NP_001360 16 7355 NP_000384 16 7355 NP_055784 16 7355 NP_001136022 16 7355 NP_001136023 16 7355 NP_057427 16 7355 NP_862827 16 7355 NP_001123564 16 7355 NP_001123563 16 7355 XP_005256867 16 7355 XP_006721647 16 7355 XP_005248319 16 7355 XP_006710524 16 7355 XP_006710523 16 7355 NP_006144 15 9605 NP_055129 15 9605 NP_001138409 15 9605 NP_061331 15 9605 NP_056534 15 9605 NP_055692 15 9605 NP_932332 15 9605 XP_006722279 15 9605 XP_006722278 15 9605 XP_005257947 15 9605 XP_005257946 15 9605 XP_005257945 15 9605 XP_006722277 15 9605 XP_006720301 15 9605 XP_005268069 15 9605 XP_005250554 15 9605 XP_006716113 15 9605 XP_005250553 15 9605 XP_006713715 15 9605 XP_006713714 15 9605 XP_006713713 15 9605 XP_005247555 15 9605>NP_115927 Length = 1321 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KKFNYVVMQ 9 +KFNYVVMQ Sbjct: 100 EKFNYVVMQ 108>XP_006715292 Length = 759 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KKFNYVVMQ 9 +KFNYVVMQ Sbjct: 87 EKFNYVVMQ 95>NP_775771 Length = 1244 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KFNYVVMQ 9 +FNYVVMQ Sbjct: 88 RFNYVVMQ 95>XP_006720466 Length = 1175 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KFNYVVMQ 9 +FNYVVMQ Sbjct: 19 RFNYVVMQ 26>XP_005254230 Length = 1175 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KFNYVVMQ 9 +FNYVVMQ Sbjct: 19 RFNYVVMQ 26>XP_006720465 Length = 1239 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KFNYVVMQ 9 +FNYVVMQ Sbjct: 83 RFNYVVMQ 90>XP_005254228 Length = 1250 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KFNYVVMQ 9 +FNYVVMQ Sbjct: 94 RFNYVVMQ 101>NP_872348 Length = 696 Score = 17.3 bits (33), Expect = 2528 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KKFNYVVMQ 9 KKF Y++++ Sbjct: 514 KKFTYIILE 522>NP_001193856 Length = 4707 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFNYVVMQ 9 KFNY++ Q Sbjct: 402 KFNYIIEQ 409>XP_006715067 Length = 4707 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFNYVVMQ 9 KFNY++ Q Sbjct: 402 KFNYIIEQ 409>NP_037486 Length = 285 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKFNYVVM 8 +K+NYV M Sbjct: 32 RKYNYVAM 39>NP_473367 Length = 244 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKFNYVVM 8 +K+NYV M Sbjct: 32 RKYNYVAM 39>XP_005273538 Length = 285 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKFNYVVM 8 +K+NYV M Sbjct: 32 RKYNYVAM 39>NP_478136 Length = 355 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KKFNYVV 7 ++FNYVV Sbjct: 117 RRFNYVV 123>NP_001229392 Length = 262 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KKFNYVV 7 ++FNYVV Sbjct: 117 RRFNYVV 123>XP_006726440 Length = 144 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KKFNYVV 7 ++FNYVV Sbjct: 59 RRFNYVV 65>XP_005266090 Length = 300 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KKFNYVV 7 ++FNYVV Sbjct: 53 RRFNYVV 59>XP_005266088 Length = 350 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KKFNYVV 7 ++FNYVV Sbjct: 129 RRFNYVV 135>XP_005266087 Length = 367 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KKFNYVV 7 ++FNYVV Sbjct: 129 RRFNYVV 135>XP_005266086 Length = 376 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KKFNYVV 7 ++FNYVV Sbjct: 129 RRFNYVV 135>XP_006711917 Length = 144 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KKFNYVV 7 ++FNYVV Sbjct: 59 RRFNYVV 65>NP_904357 Length = 367 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KKFNYVV 7 ++FNYVV Sbjct: 120 RRFNYVV 126>NP_904356 Length = 358 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KKFNYVV 7 ++FNYVV Sbjct: 120 RRFNYVV 126>NP_036305 Length = 291 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KKFNYVV 7 ++FNYVV Sbjct: 53 RRFNYVV 59>NP_061178 Length = 669 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FNYVVMQ 9 FNYV +Q Sbjct: 634 FNYVTLQ 640>NP_001360 Length = 4624 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFNYVVMQ 9 KFNY++ Q Sbjct: 296 KFNYLLEQ 303>NP_000384 Length = 1499 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 KFNYVVMQ 9 +F Y+V+Q Sbjct: 1440 RFRYIVLQ 1447>NP_055784 Length = 920 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 KKFNYVVMQ 9 K+F Y++++ Sbjct: 80 KRFRYIILK 88>NP_001136022 Length = 927 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 KKFNYVVMQ 9 K+F Y++++ Sbjct: 80 KRFRYIILK 88>NP_001136023 Length = 919 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 KKFNYVVMQ 9 K+F Y++++ Sbjct: 80 KRFRYIILK 88>NP_057427 Length = 3114 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFNYVVMQ 9 K NY+V+Q Sbjct: 2493 KNNYIVLQ 2500>NP_862827 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KKFNYVVM 8 KK+ Y+V+ Sbjct: 195 KKYKYIVL 202>NP_001123564 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KKFNYV 6 +KFNYV Sbjct: 446 QKFNYV 451>NP_001123563 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KKFNYV 6 +KFNYV Sbjct: 446 QKFNYV 451>XP_005256867 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KKFNYV 6 +KFNYV Sbjct: 446 QKFNYV 451>XP_006721647 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KKFNYV 6 +KFNYV Sbjct: 465 QKFNYV 470>XP_005248319 Length = 4609 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFNYVVMQ 9 KFNY++ Q Sbjct: 281 KFNYLLEQ 288>XP_006710524 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 KKFNYVVMQ 9 K+F Y++++ Sbjct: 80 KRFRYIILK 88>XP_006710523 Length = 922 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 KKFNYVVMQ 9 K+F Y++++ Sbjct: 80 KRFRYIILK 88>NP_006144 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KFNYVVMQ 9 KF+YV Q Sbjct: 10 KFDYVAQQ 17>NP_055129 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 KFNYVVMQ 9 KF Y++ Q Sbjct: 470 KFKYIIAQ 477>NP_001138409 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FNYVVM 8 FNY VM Sbjct: 229 FNYTVM 234>NP_061331 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KKFNYV 6 KKF+YV Sbjct: 172 KKFSYV 177>NP_056534 Length = 1745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KKFNYV 6 KKF+YV Sbjct: 1616 KKFSYV 1621>NP_055692 Length = 1942 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FNYVVMQ 9 FNY V+Q Sbjct: 1855 FNYSVLQ 1861>NP_932332 Length = 184 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KKFNYVVMQ 9 KKF Y V + Sbjct: 166 KKFGYTVSE 174>XP_006722279 Length = 1578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FNYVVMQ 9 FNY V+Q Sbjct: 1491 FNYSVLQ 1497>XP_006722278 Length = 1735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FNYVVMQ 9 FNY V+Q Sbjct: 1648 FNYSVLQ 1654>XP_005257947 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FNYVVMQ 9 FNY V+Q Sbjct: 1848 FNYSVLQ 1854>XP_005257946 Length = 1943 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FNYVVMQ 9 FNY V+Q Sbjct: 1856 FNYSVLQ 1862>XP_005257945 Length = 1969 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FNYVVMQ 9 FNY V+Q Sbjct: 1882 FNYSVLQ 1888>XP_006722277 Length = 1970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FNYVVMQ 9 FNY V+Q Sbjct: 1883 FNYSVLQ 1889>XP_006720301 Length = 184 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KKFNYVVMQ 9 KKF Y V + Sbjct: 166 KKFGYTVSE 174>XP_005268069 Length = 184 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KKFNYVVMQ 9 KKF Y V + Sbjct: 166 KKFGYTVSE 174>XP_005250554 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KKFNYV 6 KKF+YV Sbjct: 172 KKFSYV 177>XP_006716113 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KKFNYV 6 KKF+YV Sbjct: 172 KKFSYV 177>XP_005250553 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KKFNYV 6 KKF+YV Sbjct: 172 KKFSYV 177>XP_006713715 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KFNYVVMQ 9 KF+YV Q Sbjct: 10 KFDYVAQQ 17>XP_006713714 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KFNYVVMQ 9 KF+YV Q Sbjct: 10 KFDYVAQQ 17>XP_006713713 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KFNYVVMQ 9 KF+YV Q Sbjct: 10 KFDYVAQQ 17>XP_005247555 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KFNYVVMQ 9 KF+YV Q Sbjct: 10 KFDYVAQQ 17Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.137 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 455,527 Number of extensions: 627 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |