Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 19 869 NP_055459 19 869 XP_006726410 19 869 XP_006711719 19 869 XP_006711716 19 869 XP_005273038 19 869 XP_006711164 19 869 NP_001248344 18 1935 NP_694534 18 1935 NP_008871 18 1935 NP_821078 18 1935 NP_001248343 18 1935 XP_006719213 18 1935 XP_006719212 18 1935 NP_001185763 17 2528 XP_006726436 17 2528 XP_006711784 17 2528 XP_006711718 17 2528 XP_006711717 17 2528 XP_006711715 17 2528 XP_006711714 17 2528 XP_006711713 17 2528 XP_006711712 17 2528 XP_006711711 17 2528 XP_006711710 17 2528 XP_006711709 17 2528 XP_005277503 17 2528 XP_006711708 17 2528 XP_005277500 17 2528 XP_006711707 17 2528 XP_005277499 17 2528 XP_006711706 17 2528 XP_006711705 17 2528 XP_005276114 17 2528 XP_006710122 17 2528 NP_060802 17 4312 NP_006438 15 9605 NP_001001992 15 9605 NP_006209 15 9605 NP_001027582 15 9605 NP_002356 15 9605 NP_001036249 15 9605 XP_005274567 15 9605 XP_006714268 15 9605 XP_005263031 15 9605 XP_006714267 15 9605 XP_006714266 15 9605 XP_006714265 15 9605 XP_006714264 15 9605 XP_006714263 15 9605 XP_006714262 15 9605 XP_006713721 15 9605>NP_001185761 Length = 2240 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 KKA TNLEV Sbjct: 2220 KKARTNLEV 2228>NP_055459 Length = 2346 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 KKA TNLEV Sbjct: 2326 KKARTNLEV 2334>XP_006726410 Length = 2087 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 KKA TNLEV Sbjct: 2067 KKARTNLEV 2075>XP_006711719 Length = 2302 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 KKA TNLEV Sbjct: 2282 KKARTNLEV 2290>XP_006711716 Length = 2411 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 KKA TNLEV Sbjct: 2391 KKARTNLEV 2399>XP_005273038 Length = 2509 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 KKA TNLEV Sbjct: 2489 KKARTNLEV 2497>XP_006711164 Length = 2087 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 KKA TNLEV Sbjct: 2067 KKARTNLEV 2075>NP_001248344 Length = 753 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KAMTNLE 8 KAMTNLE Sbjct: 585 KAMTNLE 591>NP_694534 Length = 750 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KAMTNLE 8 KAMTNLE Sbjct: 582 KAMTNLE 588>NP_008871 Length = 763 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KAMTNLE 8 KAMTNLE Sbjct: 595 KAMTNLE 601>NP_821078 Length = 377 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KAMTNLE 8 KAMTNLE Sbjct: 209 KAMTNLE 215>NP_001248343 Length = 642 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KAMTNLE 8 KAMTNLE Sbjct: 474 KAMTNLE 480>XP_006719213 Length = 750 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KAMTNLE 8 KAMTNLE Sbjct: 582 KAMTNLE 588>XP_006719212 Length = 750 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KAMTNLE 8 KAMTNLE Sbjct: 582 KAMTNLE 588>NP_001185763 Length = 2362 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2326 KKARTNLE 2333>XP_006726436 Length = 178 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 104 KKARTNLE 111>XP_006711784 Length = 178 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 104 KKARTNLE 111>XP_006711718 Length = 1436 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 1333 KKARTNLE 1340>XP_006711717 Length = 2385 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2282 KKARTNLE 2289>XP_006711715 Length = 2428 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2325 KKARTNLE 2332>XP_006711714 Length = 2429 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2326 KKARTNLE 2333>XP_006711713 Length = 2432 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2329 KKARTNLE 2336>XP_006711712 Length = 2473 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2370 KKARTNLE 2377>XP_006711711 Length = 2482 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2379 KKARTNLE 2386>XP_006711710 Length = 2494 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2391 KKARTNLE 2398>XP_006711709 Length = 2495 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2392 KKARTNLE 2399>XP_005277503 Length = 2498 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2489 KKARTNLE 2496>XP_006711708 Length = 2512 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2409 KKARTNLE 2416>XP_005277500 Length = 2525 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2489 KKARTNLE 2496>XP_006711707 Length = 2553 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2450 KKARTNLE 2457>XP_005277499 Length = 2561 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2489 KKARTNLE 2496>XP_006711706 Length = 2591 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2488 KKARTNLE 2495>XP_006711705 Length = 2592 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 2489 KKARTNLE 2496>XP_005276114 Length = 134 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 74 KKARTNLE 81>XP_006710122 Length = 126 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA TNLE Sbjct: 104 KKARTNLE 111>NP_060802 Length = 478 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KAMTNLEV 9 K+MTNL++ Sbjct: 18 KSMTNLQI 25>NP_006438 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA+ N+E Sbjct: 37 KKALVNVE 44>NP_001001992 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA+ N+E Sbjct: 37 KKALVNVE 44>NP_006209 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KKAMTNLEV 9 KKA+TN + Sbjct: 655 KKALTNQRI 663>NP_001027582 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKAMTNLE 8 KKA+ N+E Sbjct: 37 KKALVNVE 44>NP_002356 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KKAMTNLEV 9 KKA N+EV Sbjct: 154 KKASFNMEV 162>NP_001036249 Length = 1113 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 K+ +TN+EV Sbjct: 803 KEKVTNMEV 811>XP_005274567 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KKAMTNLEV 9 KKA N+EV Sbjct: 154 KKASFNMEV 162>XP_006714268 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 K+ +TN+EV Sbjct: 752 KEKVTNMEV 760>XP_005263031 Length = 1113 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 K+ +TN+EV Sbjct: 803 KEKVTNMEV 811>XP_006714267 Length = 1117 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 K+ +TN+EV Sbjct: 803 KEKVTNMEV 811>XP_006714266 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 K+ +TN+EV Sbjct: 803 KEKVTNMEV 811>XP_006714265 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 K+ +TN+EV Sbjct: 803 KEKVTNMEV 811>XP_006714264 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 K+ +TN+EV Sbjct: 803 KEKVTNMEV 811>XP_006714263 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 K+ +TN+EV Sbjct: 803 KEKVTNMEV 811>XP_006714262 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKAMTNLEV 9 K+ +TN+EV Sbjct: 803 KEKVTNMEV 811>XP_006713721 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KKAMTNLEV 9 KKA+TN + Sbjct: 655 KKALTNQRI 663Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.115 0.271 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 282,408 Number of extensions: 382 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |