Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003290 20 299 NP_001073932 17 2528 NP_001368 17 2528 XP_006718966 17 2528 NP_940905 17 3301 XP_006711360 17 3301 XP_006711359 17 3301 XP_006711357 17 3301 NP_001121636 17 4312 NP_000323 17 4312 NP_001123537 17 4312 NP_004136 17 4312 XP_006722821 17 4312 XP_006722820 17 4312 XP_005259972 17 4312 XP_006722819 17 4312 XP_006722818 17 4312 NP_065873 16 5631 NP_001258932 16 5631 XP_006717257 16 5631 XP_006717256 16 5631 NP_003633 16 7355 NP_061027 16 7355 NP_001001661 16 7355 XP_006712871 16 7355 NP_001028252 16 7355 NP_055441 16 7355 NP_443199 16 7355 NP_002045 15 9605 NP_787079 15 9605 NP_061918 15 9605 NP_001171894 15 9605 NP_000916 15 9605 NP_001137296 15 9605 NP_659452 15 9605 NP_001107604 15 9605 NP_001091985 15 9605 NP_001271353 15 9605 NP_060488 15 9605 XP_005269054 15 9605 XP_005246845 15 9605 XP_006712765 15 9605 XP_006712764 15 9605 XP_005246844 15 9605 XP_006712763 15 9605 XP_006712762 15 9605 XP_006712761 15 9605 NP_055545 15 9605>NP_003290 Length = 803 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KIYFMAGS 8 KIYFMAGS Sbjct: 537 KIYFMAGS 544>NP_001073932 Length = 4314 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIYFMAGSI 9 KIY +AGS+ Sbjct: 2465 KIYLLAGSM 2473>NP_001368 Length = 4307 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIYFMAGSI 9 KIY +AGS+ Sbjct: 2465 KIYLLAGSM 2473>XP_006718966 Length = 4300 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIYFMAGSI 9 KIY +AGS+ Sbjct: 2465 KIYLLAGSM 2473>NP_940905 Length = 1135 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IYFMAGSI 9 +Y+M GSI Sbjct: 774 VYYMVGSI 781>XP_006711360 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IYFMAGSI 9 +Y+M GSI Sbjct: 331 VYYMVGSI 338>XP_006711359 Length = 752 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IYFMAGSI 9 +Y+M GSI Sbjct: 384 VYYMVGSI 391>XP_006711357 Length = 1142 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IYFMAGSI 9 +Y+M GSI Sbjct: 774 VYYMVGSI 781>NP_001121636 Length = 815 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YFMAGSI 9 YFM GSI Sbjct: 573 YFMKGSI 579>NP_000323 Length = 815 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YFMAGSI 9 YFM GSI Sbjct: 573 YFMKGSI 579>NP_001123537 Length = 2022 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KIYFMAGSI 9 KIY AGSI Sbjct: 174 KIYTYAGSI 182>NP_004136 Length = 2157 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KIYFMAGSI 9 KIY AGSI Sbjct: 174 KIYTYAGSI 182>XP_006722821 Length = 1462 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KIYFMAGSI 9 KIY AGSI Sbjct: 174 KIYTYAGSI 182>XP_006722820 Length = 2140 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KIYFMAGSI 9 KIY AGSI Sbjct: 174 KIYTYAGSI 182>XP_005259972 Length = 2141 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KIYFMAGSI 9 KIY AGSI Sbjct: 174 KIYTYAGSI 182>XP_006722819 Length = 2156 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KIYFMAGSI 9 KIY AGSI Sbjct: 174 KIYTYAGSI 182>XP_006722818 Length = 2157 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KIYFMAGSI 9 KIY AGSI Sbjct: 174 KIYTYAGSI 182>NP_065873 Length = 1235 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IYFMAGSI 9 +Y+M GS+ Sbjct: 856 VYYMEGSV 863>NP_001258932 Length = 1211 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IYFMAGSI 9 +Y+M GS+ Sbjct: 811 VYYMEGSV 818>XP_006717257 Length = 1083 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IYFMAGSI 9 +Y+M GS+ Sbjct: 683 VYYMEGSV 690>XP_006717256 Length = 1172 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IYFMAGSI 9 +Y+M GS+ Sbjct: 772 VYYMEGSV 779>NP_003633 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IYFMAGSI 9 +Y++AGS+ Sbjct: 76 LYYIAGSL 83>NP_061027 Length = 4599 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KIYFMAGSI 9 K+YF GS+ Sbjct: 2376 KLYFSDGSL 2384>NP_001001661 Length = 752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KIYFMAGSI 9 K YF+ GS+ Sbjct: 253 KSYFLKGSL 261>XP_006712871 Length = 413 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IYFMAGSI 9 +Y++AGS+ Sbjct: 70 LYYIAGSL 77>NP_001028252 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FMAGSI 9 FMAGSI Sbjct: 49 FMAGSI 54>NP_055441 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FMAGSI 9 FMAGSI Sbjct: 4 FMAGSI 9>NP_443199 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IYFMAGSI 9 IYF GS+ Sbjct: 313 IYFFVGSL 320>NP_002045 Length = 180 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IYFMAG 7 IYF+AG Sbjct: 4 IYFVAG 9>NP_787079 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 IYFMAG 7 IYFM G Sbjct: 199 IYFMTG 204>NP_061918 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YFMAGSI 9 YF++GS+ Sbjct: 662 YFLSGSL 668>NP_001171894 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YFMAGSI 9 YF++GS+ Sbjct: 662 YFLSGSL 668>NP_000916 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KIYFMAGSI 9 K Y+M+G + Sbjct: 129 KTYYMSGGL 137>NP_001137296 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IYFMAGSI 9 I+FM GS+ Sbjct: 523 IFFMIGSM 530>NP_659452 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 IYFMAG 7 +YF+AG Sbjct: 290 VYFLAG 295>NP_001107604 Length = 2694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IYFMAGSI 9 IYF GSI Sbjct: 1914 IYFYDGSI 1921>NP_001091985 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 IYFMAG 7 +YF+AG Sbjct: 290 VYFLAG 295>NP_001271353 Length = 794 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KIYFMAGSI 9 K+Y AG++ Sbjct: 635 KVYLAAGTV 643>NP_060488 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IYFMAGSI 9 I+FM GS+ Sbjct: 523 IFFMIGSM 530>XP_005269054 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IYFMAGSI 9 I+FM GS+ Sbjct: 523 IFFMIGSM 530>XP_005246845 Length = 1624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IYFMAGSI 9 IYF GSI Sbjct: 831 IYFYDGSI 838>XP_006712765 Length = 2679 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IYFMAGSI 9 IYF GSI Sbjct: 1886 IYFYDGSI 1893>XP_006712764 Length = 2697 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IYFMAGSI 9 IYF GSI Sbjct: 1943 IYFYDGSI 1950>XP_005246844 Length = 2707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IYFMAGSI 9 IYF GSI Sbjct: 1914 IYFYDGSI 1921>XP_006712763 Length = 2716 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IYFMAGSI 9 IYF GSI Sbjct: 1943 IYFYDGSI 1950>XP_006712762 Length = 2723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IYFMAGSI 9 IYF GSI Sbjct: 1943 IYFYDGSI 1950>XP_006712761 Length = 2736 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IYFMAGSI 9 IYF GSI Sbjct: 1943 IYFYDGSI 1950>NP_055545 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IYFMAGSI 9 +Y MAG++ Sbjct: 208 LYIMAGTV 215Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.148 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 470,220 Number of extensions: 882 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |