Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 19 665 XP_005266703 19 665 NP_065829 16 5631 NP_803879 16 7355 NP_803881 16 7355 NP_001258992 16 7355 NP_110428 16 7355 NP_001229291 16 7355 NP_001258991 16 7355 NP_001073341 16 7355 NP_001092270 16 7355 NP_001258990 16 7355 NP_003579 16 7355 XP_006724848 16 7355 XP_006724847 16 7355 XP_005262538 16 7355 XP_006724671 16 7355 XP_006724670 16 7355 NP_115495 15 9605 NP_002284 15 9605 NP_068766 15 9605 NP_597732 15 9605 XP_006722741 15 9605 XP_006722740 15 9605 XP_006722739 15 9605 XP_006722738 15 9605 XP_006722737 15 9605 XP_005259567 15 9605 XP_006721630 15 9605 XP_006721629 15 9605 XP_006721628 15 9605>NP_443179 Length = 2170 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KIYAAEAQ 8 KIYAAEAQ Sbjct: 1993 KIYAAEAQ 2000>XP_005266703 Length = 1501 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KIYAAEAQ 8 KIYAAEAQ Sbjct: 1324 KIYAAEAQ 1331>NP_065829 Length = 1907 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KIYAAEAQ 8 KI+AAEA+ Sbjct: 1685 KIFAAEAR 1692>NP_803879 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YAAEAQ 8 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_803881 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YAAEAQ 8 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_001258992 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YAAEAQ 8 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_110428 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YAAEAQ 8 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_001229291 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YAAEAQ 8 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_001258991 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YAAEAQ 8 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_001073341 Length = 895 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KIYAAEAQ 8 ++YAAE Q Sbjct: 377 RLYAAEGQ 384>NP_001092270 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YAAEAQ 8 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_001258990 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YAAEAQ 8 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_003579 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KIYAAEAQ 8 ++YAAE Q Sbjct: 395 RLYAAEGQ 402>XP_006724848 Length = 900 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KIYAAEAQ 8 ++YAAE Q Sbjct: 382 RLYAAEGQ 389>XP_006724847 Length = 902 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KIYAAEAQ 8 ++YAAE Q Sbjct: 382 RLYAAEGQ 389>XP_005262538 Length = 915 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KIYAAEAQ 8 ++YAAE Q Sbjct: 395 RLYAAEGQ 402>XP_006724671 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YAAEAQ 8 YAAEAQ Sbjct: 152 YAAEAQ 157>XP_006724670 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YAAEAQ 8 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_115495 Length = 6306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIYAAEAQL 9 +IYAAE ++ Sbjct: 5841 RIYAAEPRI 5849>NP_002284 Length = 1609 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIYAAEAQL 9 +IYA+ AQL Sbjct: 1266 EIYASVAQL 1274>NP_068766 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KIYAAE 6 K+YAAE Sbjct: 205 KVYAAE 210>NP_597732 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YAAEAQL 9 +AAEAQL Sbjct: 1014 HAAEAQL 1020>XP_006722741 Length = 1117 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YAAEAQL 9 +AAEAQL Sbjct: 985 HAAEAQL 991>XP_006722740 Length = 1153 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YAAEAQL 9 +AAEAQL Sbjct: 1021 HAAEAQL 1027>XP_006722739 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YAAEAQL 9 +AAEAQL Sbjct: 1049 HAAEAQL 1055>XP_006722738 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YAAEAQL 9 +AAEAQL Sbjct: 1049 HAAEAQL 1055>XP_006722737 Length = 1182 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YAAEAQL 9 +AAEAQL Sbjct: 1050 HAAEAQL 1056>XP_005259567 Length = 1217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YAAEAQL 9 +AAEAQL Sbjct: 1085 HAAEAQL 1091>XP_006721630 Length = 191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KIYAAE 6 K+YAAE Sbjct: 56 KVYAAE 61>XP_006721629 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KIYAAE 6 K+YAAE Sbjct: 205 KVYAAE 210>XP_006721628 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KIYAAE 6 K+YAAE Sbjct: 205 KVYAAE 210Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.123 0.301 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 308,721 Number of extensions: 270 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |