Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 20 390 NP_001243397 20 390 XP_005269721 20 390 NP_001073936 17 3301 NP_036260 17 3301 XP_006710516 17 3301 NP_689845 16 5631 NP_056054 16 7355 NP_001273646 16 7355 NP_056078 16 7355 NP_003483 16 7355 NP_001167587 16 7355 NP_001167588 16 7355 NP_001273644 16 7355 NP_001269308 16 7355 NP_079334 16 7355 NP_001243529 16 7355 NP_001269307 16 7355 NP_001243528 16 7355 NP_001243530 16 7355 XP_005254315 16 7355 XP_005254314 16 7355 XP_006720509 16 7355 XP_005254313 16 7355 XP_005254312 16 7355 XP_005251906 16 7355 XP_005251905 16 7355 XP_005251904 16 7355 XP_006716564 16 7355 XP_005250826 16 7355 NP_001106 16 7355 NP_001934 15 9605 NP_078966 15 9605 NP_997257 15 9605>NP_036462 Length = 2073 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KITTSSTYI 9 KITT+STYI Sbjct: 412 KITTTSTYI 420>NP_001243397 Length = 1890 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KITTSSTYI 9 KITT+STYI Sbjct: 412 KITTTSTYI 420>XP_005269721 Length = 2073 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KITTSSTYI 9 KITT+STYI Sbjct: 412 KITTTSTYI 420>NP_001073936 Length = 1848 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITTSSTYI 9 +TTS TY+ Sbjct: 382 VTTSETYV 389>NP_036260 Length = 919 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITTSSTYI 9 +TT+STY+ Sbjct: 56 VTTASTYL 63>XP_006710516 Length = 514 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITTSSTYI 9 +TT+STY+ Sbjct: 56 VTTASTYL 63>NP_689845 Length = 976 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ITTSSTYI 9 + TSSTYI Sbjct: 803 LPTSSTYI 810>NP_056054 Length = 1186 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KITTSSTYI 9 K+T+ +TY+ Sbjct: 1125 KVTSPTTYV 1133>NP_001273646 Length = 1238 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KITTSSTYI 9 K+T+ +TY+ Sbjct: 1177 KVTSPTTYV 1185>NP_056078 Length = 3036 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSSTYI 9 TSSTYI Sbjct: 1764 TSSTYI 1769>NP_003483 Length = 261 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TTSSTYI 9 TTS+TY+ Sbjct: 188 TTSATYL 194>NP_001167587 Length = 3037 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSSTYI 9 TSSTYI Sbjct: 1764 TSSTYI 1769>NP_001167588 Length = 2400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSSTYI 9 TSSTYI Sbjct: 1128 TSSTYI 1133>NP_001273644 Length = 1278 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KITTSSTYI 9 K+T+ +TY+ Sbjct: 1217 KVTSPTTYV 1225>NP_001269308 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KITTSSTYI 9 K+T S TYI Sbjct: 273 KLTKSLTYI 281>NP_079334 Length = 759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KITTSSTYI 9 K+T S TYI Sbjct: 273 KLTKSLTYI 281>NP_001243529 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KITTSSTYI 9 K+T S TYI Sbjct: 260 KLTKSLTYI 268>NP_001269307 Length = 633 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KITTSSTYI 9 K+T S TYI Sbjct: 147 KLTKSLTYI 155>NP_001243528 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KITTSSTYI 9 K+T S TYI Sbjct: 250 KLTKSLTYI 258>NP_001243530 Length = 746 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KITTSSTYI 9 K+T S TYI Sbjct: 260 KLTKSLTYI 268>XP_005254315 Length = 2576 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSSTYI 9 TSSTYI Sbjct: 1764 TSSTYI 1769>XP_005254314 Length = 2605 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSSTYI 9 TSSTYI Sbjct: 1764 TSSTYI 1769>XP_006720509 Length = 2646 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSSTYI 9 TSSTYI Sbjct: 1764 TSSTYI 1769>XP_005254313 Length = 3057 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSSTYI 9 TSSTYI Sbjct: 1764 TSSTYI 1769>XP_005254312 Length = 3058 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSSTYI 9 TSSTYI Sbjct: 1764 TSSTYI 1769>XP_005251906 Length = 1108 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KITTSSTYI 9 K+T+ +TY+ Sbjct: 1047 KVTSPTTYV 1055>XP_005251905 Length = 1226 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KITTSSTYI 9 K+T+ +TY+ Sbjct: 1165 KVTSPTTYV 1173>XP_005251904 Length = 1226 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KITTSSTYI 9 K+T+ +TY+ Sbjct: 1165 KVTSPTTYV 1173>XP_006716564 Length = 1185 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KITTSSTYI 9 K TTS TY+ Sbjct: 234 KDTTSHTYL 242>XP_005250826 Length = 1221 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KITTSSTYI 9 K TTS TY+ Sbjct: 234 KDTTSHTYL 242>NP_001106 Length = 1251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KITTSSTYI 9 K TTS TY+ Sbjct: 234 KDTTSHTYL 242>NP_001934 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ITTSSTYI 9 ITTSST + Sbjct: 1100 ITTSSTRV 1107>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KITTSSTY 8 K+T SST+ Sbjct: 1164 KVTMSSTF 1171>NP_997257 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ITTSSTYI 9 ITTS T+I Sbjct: 205 ITTSYTFI 212Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.114 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 310,285 Number of extensions: 337 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |