Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 18 1482 NP_000170 18 1482 NP_001268422 18 1482 NP_001268423 18 1482 XP_005264328 18 1482 XP_006720393 18 1935 XP_006720392 18 1935 XP_006720391 18 1935 NP_775899 17 3301 NP_056327 17 4312 XP_006713163 17 4312 NP_036546 16 7355 NP_005302 15 9605 NP_001001549 15 9605 NP_001001550 15 9605 NP_001001555 15 9605 NP_892006 15 9605 NP_149062 15 9605 NP_110393 15 9605 NP_001129628 15 9605 NP_620048 15 9605 NP_620049 15 9605 NP_055725 15 9605 XP_006719214 15 9605 XP_006715768 15 9605 XP_005271823 15 9605 XP_005271822 15 9605 XP_006715767 15 9605 XP_006715766 15 9605 XP_005271818 15 9605 XP_005271817 15 9605 XP_006715488 15 9605 XP_006715487 15 9605 XP_006715486 15 9605 XP_006715485 15 9605 XP_006715484 15 9605 XP_006715483 15 9605 XP_006715482 15 9605 XP_006715481 15 9605 XP_006715480 15 9605 XP_006715479 15 9605 XP_006715478 15 9605 XP_006715477 15 9605 XP_006715476 15 9605 XP_006715475 15 9605 XP_006715474 15 9605 XP_006715473 15 9605 XP_006715472 15 9605 XP_006715471 15 9605 XP_006715470 15 9605 NP_060422 15 9605>NP_001268421 Length = 1230 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KISKVVELL 9 KIS+VVELL Sbjct: 674 KISEVVELL 682>NP_000170 Length = 1360 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KISKVVELL 9 KIS+VVELL Sbjct: 804 KISEVVELL 812>NP_001268422 Length = 1058 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KISKVVELL 9 KIS+VVELL Sbjct: 502 KISEVVELL 510>NP_001268423 Length = 1058 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KISKVVELL 9 KIS+VVELL Sbjct: 502 KISEVVELL 510>XP_005264328 Length = 1261 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KISKVVELL 9 KIS+VVELL Sbjct: 705 KISEVVELL 713>XP_006720393 Length = 465 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KISKVVEL 8 K+SKVVEL Sbjct: 457 KVSKVVEL 464>XP_006720392 Length = 465 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KISKVVEL 8 K+SKVVEL Sbjct: 457 KVSKVVEL 464>XP_006720391 Length = 465 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KISKVVEL 8 K+SKVVEL Sbjct: 457 KVSKVVEL 464>NP_775899 Length = 4462 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KISKVVELL 9 K++K+VE+L Sbjct: 249 KVNKIVEIL 257>NP_056327 Length = 4265 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KISKVVELL 9 K+S++VEL+ Sbjct: 2095 KLSRIVELI 2103>XP_006713163 Length = 4265 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KISKVVELL 9 K+S++VEL+ Sbjct: 2095 KLSRIVELI 2103>NP_036546 Length = 1393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ISKVVELL 9 ++KV+ELL Sbjct: 1361 VNKVIELL 1368>NP_005302 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKVVELL 9 SKVVE+L Sbjct: 179 SKVVEIL 185>NP_001001549 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKVVELL 9 SKVVE+L Sbjct: 179 SKVVEIL 185>NP_001001550 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKVVELL 9 SKVVE+L Sbjct: 121 SKVVEIL 127>NP_001001555 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKVVELL 9 SKVVE+L Sbjct: 121 SKVVEIL 127>NP_892006 Length = 8797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2879 KLSKIKELI 2887>NP_149062 Length = 8749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2886 KLSKIKELI 2894>NP_110393 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ISKVVELL 9 ++K+VELL Sbjct: 209 LAKIVELL 216>NP_001129628 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KISKVVE 7 K+SK+VE Sbjct: 50 KLSKIVE 56>NP_620048 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ISKVVELL 9 ++K+VELL Sbjct: 209 LAKIVELL 216>NP_620049 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ISKVVELL 9 ++K+VELL Sbjct: 209 LAKIVELL 216>NP_055725 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KISKVVE 7 K+SK+VE Sbjct: 50 KLSKIVE 56>XP_006719214 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ISKVVELL 9 ++K+VELL Sbjct: 209 LAKIVELL 216>XP_006715768 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKVVELL 9 SKVVE+L Sbjct: 121 SKVVEIL 127>XP_005271823 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKVVELL 9 SKVVE+L Sbjct: 121 SKVVEIL 127>XP_005271822 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKVVELL 9 SKVVE+L Sbjct: 121 SKVVEIL 127>XP_006715767 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKVVELL 9 SKVVE+L Sbjct: 173 SKVVEIL 179>XP_006715766 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKVVELL 9 SKVVE+L Sbjct: 179 SKVVEIL 185>XP_005271818 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKVVELL 9 SKVVE+L Sbjct: 179 SKVVEIL 185>XP_005271817 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKVVELL 9 SKVVE+L Sbjct: 179 SKVVEIL 185>XP_006715488 Length = 8721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2886 KLSKIKELI 2894>XP_006715487 Length = 8744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2886 KLSKIKELI 2894>XP_006715486 Length = 8758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2886 KLSKIKELI 2894>XP_006715485 Length = 8793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2833 KLSKIKELI 2841>XP_006715484 Length = 8794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2886 KLSKIKELI 2894>XP_006715483 Length = 8795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2886 KLSKIKELI 2894>XP_006715482 Length = 8797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2879 KLSKIKELI 2887>XP_006715481 Length = 8799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2839 KLSKIKELI 2847>XP_006715480 Length = 8799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2886 KLSKIKELI 2894>XP_006715479 Length = 8804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2886 KLSKIKELI 2894>XP_006715478 Length = 8809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2886 KLSKIKELI 2894>XP_006715477 Length = 8822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2862 KLSKIKELI 2870>XP_006715476 Length = 8823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2886 KLSKIKELI 2894>XP_006715475 Length = 8827 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2886 KLSKIKELI 2894>XP_006715474 Length = 8829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2869 KLSKIKELI 2877>XP_006715473 Length = 8832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2886 KLSKIKELI 2894>XP_006715472 Length = 8839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2879 KLSKIKELI 2887>XP_006715471 Length = 8842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2886 KLSKIKELI 2894>XP_006715470 Length = 8846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K+SK+ EL+ Sbjct: 2886 KLSKIKELI 2894>NP_060422 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KISKVVELL 9 K SK++ELL Sbjct: 312 KWSKILELL 320Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.138 0.308 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 276,790 Number of extensions: 405 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |