Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001276866 19 869 NP_004439 19 869 NP_001276865 19 869 NP_001005862 19 869 XP_005257197 19 869 XP_006721828 19 869 NP_001036064 18 1135 NP_005226 18 1135 XP_005246434 18 1135 XP_005246433 18 1135 XP_005246432 18 1135 XP_006712427 18 1135 NP_005219 17 2528 NP_001973 17 2528 NP_001787 17 2528 NP_001788 17 2528 XP_005255824 17 2528 XP_005255823 17 2528 XP_005255821 17 2528 XP_005255820 17 2528 XP_005255819 17 2528 XP_005255818 17 2528 XP_005255817 17 2528 XP_005255816 17 2528 NP_543013 16 5631 NP_079463 16 5631 XP_005256234 16 5631 XP_005256235 16 5631 XP_006721347 16 5631 NP_689862 16 7355 NP_775926 16 7355 NP_001265229 16 7355 NP_001073917 16 7355 NP_060290 16 7355 XP_005255891 16 7355 XP_006717224 16 7355 XP_006717223 16 7355 XP_006717222 16 7355 XP_006717221 16 7355 XP_006717220 16 7355 XP_006717219 16 7355 XP_006717218 16 7355 XP_006717217 16 7355 XP_006717216 16 7355 XP_006717215 16 7355 XP_006717214 16 7355 XP_006713657 16 7355 XP_006713656 16 7355 XP_006713655 16 7355 NP_001259004 15 9605 NP_005144 15 9605 NP_004422 15 9605 NP_689749 15 9605 XP_006721395 15 9605 XP_006721394 15 9605 XP_006721393 15 9605 XP_005264958 15 9605 XP_005264957 15 9605 XP_005245809 15 9605 XP_005245808 15 9605>NP_001276866 Length = 1055 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 KIPVAIKV Sbjct: 747 KIPVAIKV 754>NP_004439 Length = 1255 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 KIPVAIKV Sbjct: 747 KIPVAIKV 754>NP_001276865 Length = 1240 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 KIPVAIKV Sbjct: 732 KIPVAIKV 739>NP_001005862 Length = 1225 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 KIPVAIKV Sbjct: 717 KIPVAIKV 724>XP_005257197 Length = 1225 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 KIPVAIKV Sbjct: 717 KIPVAIKV 724>XP_006721828 Length = 1336 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 KIPVAIKV Sbjct: 828 KIPVAIKV 835>NP_001036064 Length = 1292 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 KIPVAIK+ Sbjct: 745 KIPVAIKI 752>NP_005226 Length = 1308 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 KIPVAIK+ Sbjct: 745 KIPVAIKI 752>XP_005246434 Length = 1282 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 KIPVAIK+ Sbjct: 735 KIPVAIKI 742>XP_005246433 Length = 1298 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 KIPVAIK+ Sbjct: 735 KIPVAIKI 742>XP_005246432 Length = 1307 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 KIPVAIK+ Sbjct: 760 KIPVAIKI 767>XP_006712427 Length = 1323 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 KIPVAIK+ Sbjct: 760 KIPVAIKI 767>NP_005219 Length = 1210 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 KIPVAIK 7 KIPVAIK Sbjct: 739 KIPVAIK 745>NP_001973 Length = 1342 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KIPVAIKV 8 KIPV IKV Sbjct: 736 KIPVCIKV 743>NP_001787 Length = 799 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 ++PVAIKV Sbjct: 479 RVPVAIKV 486>NP_001788 Length = 796 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 K+PVAI+V Sbjct: 471 KVPVAIRV 478>XP_005255824 Length = 560 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 K+PVAI+V Sbjct: 471 KVPVAIRV 478>XP_005255823 Length = 565 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 K+PVAI+V Sbjct: 471 KVPVAIRV 478>XP_005255821 Length = 693 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 K+PVAI+V Sbjct: 471 KVPVAIRV 478>XP_005255820 Length = 796 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 K+PVAI+V Sbjct: 471 KVPVAIRV 478>XP_005255819 Length = 796 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 K+PVAI+V Sbjct: 471 KVPVAIRV 478>XP_005255818 Length = 796 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 K+PVAI+V Sbjct: 471 KVPVAIRV 478>XP_005255817 Length = 711 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 ++PVAIKV Sbjct: 479 RVPVAIKV 486>XP_005255816 Length = 799 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KIPVAIKV 8 ++PVAIKV Sbjct: 479 RVPVAIKV 486>NP_543013 Length = 488 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IPVAIKV 8 +PVAIKV Sbjct: 253 LPVAIKV 259>NP_079463 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KIPVAIK 7 KIP+AIK Sbjct: 328 KIPLAIK 334>XP_005256234 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KIPVAIK 7 KIP+AIK Sbjct: 328 KIPLAIK 334>XP_005256235 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KIPVAIK 7 KIP+AIK Sbjct: 328 KIPLAIK 334>XP_006721347 Length = 519 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KIPVAIK 7 KIP+AIK Sbjct: 425 KIPLAIK 431>NP_689862 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KIPVAIKV 8 + PVAIKV Sbjct: 224 RAPVAIKV 231>NP_775926 Length = 334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KIPVAIK 7 +IPVAIK Sbjct: 143 EIPVAIK 149>NP_001265229 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KIPVAIK 7 +IPVAIK Sbjct: 143 EIPVAIK 149>NP_001073917 Length = 1130 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KIPVAIK 7 +IPVAIK Sbjct: 751 EIPVAIK 757>NP_060290 Length = 876 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIPVAIKVS 9 ++PVA+ VS Sbjct: 610 QVPVAVAVS 618>XP_005255891 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KIPVAIKV 8 + PVAIKV Sbjct: 224 RAPVAIKV 231>XP_006717224 Length = 915 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIPVAIKVS 9 ++PVA+ VS Sbjct: 662 QVPVAVAVS 670>XP_006717223 Length = 557 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIPVAIKVS 9 ++PVA+ VS Sbjct: 291 QVPVAVAVS 299>XP_006717222 Length = 557 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIPVAIKVS 9 ++PVA+ VS Sbjct: 291 QVPVAVAVS 299>XP_006717221 Length = 793 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIPVAIKVS 9 ++PVA+ VS Sbjct: 663 QVPVAVAVS 671>XP_006717220 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIPVAIKVS 9 ++PVA+ VS Sbjct: 663 QVPVAVAVS 671>XP_006717219 Length = 856 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIPVAIKVS 9 ++PVA+ VS Sbjct: 663 QVPVAVAVS 671>XP_006717218 Length = 877 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIPVAIKVS 9 ++PVA+ VS Sbjct: 611 QVPVAVAVS 619>XP_006717217 Length = 905 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIPVAIKVS 9 ++PVA+ VS Sbjct: 639 QVPVAVAVS 647>XP_006717216 Length = 916 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIPVAIKVS 9 ++PVA+ VS Sbjct: 663 QVPVAVAVS 671>XP_006717215 Length = 928 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIPVAIKVS 9 ++PVA+ VS Sbjct: 662 QVPVAVAVS 670>XP_006717214 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIPVAIKVS 9 ++PVA+ VS Sbjct: 663 QVPVAVAVS 671>XP_006713657 Length = 496 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KIPVAIK 7 +IPVAIK Sbjct: 117 EIPVAIK 123>XP_006713656 Length = 496 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KIPVAIK 7 +IPVAIK Sbjct: 117 EIPVAIK 123>XP_006713655 Length = 1146 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KIPVAIK 7 +IPVAIK Sbjct: 767 EIPVAIK 773>NP_001259004 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PVAIKVS 9 PVAIK++ Sbjct: 395 PVAIKIA 401>NP_005144 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PVAIKVS 9 PVAIK++ Sbjct: 391 PVAIKIA 397>NP_004422 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KIPVAIK 7 ++PVAIK Sbjct: 640 EVPVAIK 646>NP_689749 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KIPVAIKV 8 K+P A+K+ Sbjct: 1171 KVPYALKI 1178>XP_006721395 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PVAIKVS 9 PVAIK++ Sbjct: 195 PVAIKIA 201>XP_006721394 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PVAIKVS 9 PVAIK++ Sbjct: 396 PVAIKIA 402>XP_006721393 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PVAIKVS 9 PVAIK++ Sbjct: 396 PVAIKIA 402>XP_005264958 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KIPVAIKV 8 K+P A+K+ Sbjct: 1214 KVPYALKI 1221>XP_005264957 Length = 1505 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KIPVAIKV 8 K+P A+K+ Sbjct: 1214 KVPYALKI 1221>XP_005245809 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KIPVAIK 7 ++PVAIK Sbjct: 586 EVPVAIK 592>XP_005245808 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KIPVAIK 7 ++PVAIK Sbjct: 629 EVPVAIK 635Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.134 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 509,741 Number of extensions: 673 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |