Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 18 1135 NP_001276866 18 1482 NP_004439 18 1482 NP_001276865 18 1482 NP_001005862 18 1482 XP_005257197 18 1482 XP_006721828 18 1482 NP_001036064 17 3301 NP_005226 17 3301 XP_005246434 17 3301 XP_005246433 17 3301 XP_005246432 17 3301 XP_006712427 17 3301 NP_001137307 17 4312 NP_006156 17 4312 NP_060220 17 4312 XP_005271626 17 4312 XP_005271625 17 4312 XP_005271624 17 4312 XP_005271623 17 4312 XP_005271622 17 4312 NP_057232 16 5631 XP_006723297 16 5631 XP_006723296 16 5631 XP_005259020 16 5631 XP_006720120 16 5631 XP_006720119 16 5631 NP_689659 16 5631 NP_001121685 16 7355 NP_001121684 16 7355 XP_006712405 16 7355 XP_006712404 16 7355 XP_005246413 16 7355 NP_689741 16 7355 NP_005859 16 7355 NP_001030025 15 9605 NP_000319 15 9605 NP_001274420 15 9605 NP_001185882 15 9605 NP_076976 15 9605 XP_005272690 15 9605 XP_006724601 15 9605 XP_005271739 15 9605 XP_005250117 15 9605 XP_005264244 15 9605 NP_003469 15 9605 NP_003583 15 9605>NP_005219 Length = 1210 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 KIKVL SGA Sbjct: 714 KIKVLGSGA 722>NP_001276866 Length = 1055 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 K+KVL SGA Sbjct: 722 KVKVLGSGA 730>NP_004439 Length = 1255 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 K+KVL SGA Sbjct: 722 KVKVLGSGA 730>NP_001276865 Length = 1240 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 K+KVL SGA Sbjct: 707 KVKVLGSGA 715>NP_001005862 Length = 1225 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 K+KVL SGA Sbjct: 692 KVKVLGSGA 700>XP_005257197 Length = 1225 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 K+KVL SGA Sbjct: 692 KVKVLGSGA 700>XP_006721828 Length = 1336 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 K+KVL SGA Sbjct: 803 KVKVLGSGA 811>NP_001036064 Length = 1292 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 ++KVL SGA Sbjct: 720 RVKVLGSGA 728>NP_005226 Length = 1308 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 ++KVL SGA Sbjct: 720 RVKVLGSGA 728>XP_005246434 Length = 1282 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 ++KVL SGA Sbjct: 710 RVKVLGSGA 718>XP_005246433 Length = 1298 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 ++KVL SGA Sbjct: 710 RVKVLGSGA 718>XP_005246432 Length = 1307 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 ++KVL SGA Sbjct: 735 RVKVLGSGA 743>XP_006712427 Length = 1323 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 ++KVL SGA Sbjct: 735 RVKVLGSGA 743>NP_001137307 Length = 1299 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IKVLSSG 8 IKVLSSG Sbjct: 695 IKVLSSG 701>NP_006156 Length = 1324 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IKVLSSG 8 IKVLSSG Sbjct: 720 IKVLSSG 726>NP_060220 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IKVLSSGA 9 +KV+SSGA Sbjct: 198 VKVVSSGA 205>XP_005271626 Length = 1294 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IKVLSSG 8 IKVLSSG Sbjct: 779 IKVLSSG 785>XP_005271625 Length = 1311 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IKVLSSG 8 IKVLSSG Sbjct: 707 IKVLSSG 713>XP_005271624 Length = 1311 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IKVLSSG 8 IKVLSSG Sbjct: 707 IKVLSSG 713>XP_005271623 Length = 1371 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IKVLSSG 8 IKVLSSG Sbjct: 767 IKVLSSG 773>XP_005271622 Length = 1383 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IKVLSSG 8 IKVLSSG Sbjct: 779 IKVLSSG 785>NP_057232 Length = 2161 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KIKVLSSG 8 KIKVLS G Sbjct: 580 KIKVLSIG 587>XP_006723297 Length = 2152 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KIKVLSSG 8 KIKVLS G Sbjct: 580 KIKVLSIG 587>XP_006723296 Length = 2161 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KIKVLSSG 8 KIKVLS G Sbjct: 580 KIKVLSIG 587>XP_005259020 Length = 2169 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KIKVLSSG 8 KIKVLS G Sbjct: 580 KIKVLSIG 587>XP_006720120 Length = 1055 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KIKVLSSG 8 K+KV SSG Sbjct: 810 KLKVFSSG 817>XP_006720119 Length = 1094 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KIKVLSSG 8 K+KV SSG Sbjct: 849 KLKVFSSG 856>NP_689659 Length = 1094 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KIKVLSSG 8 K+KV SSG Sbjct: 849 KLKVFSSG 856>NP_001121685 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KIKVLSSG 8 K+K LSSG Sbjct: 396 KVKSLSSG 403>NP_001121684 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KIKVLSSG 8 K+K LSSG Sbjct: 396 KVKSLSSG 403>XP_006712405 Length = 238 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KIKVLSSG 8 K+K LSSG Sbjct: 158 KVKSLSSG 165>XP_006712404 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KIKVLSSG 8 K+K LSSG Sbjct: 227 KVKSLSSG 234>XP_005246413 Length = 384 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KIKVLSSG 8 K+K LSSG Sbjct: 304 KVKSLSSG 311>NP_689741 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KIKVLSSG 8 K+K LSSG Sbjct: 396 KVKSLSSG 403>NP_005859 Length = 118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 K+K+LS G+ Sbjct: 84 KLKILSRGS 92>NP_001030025 Length = 1152 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 KIK LS+G+ Sbjct: 141 KIKQLSAGS 149>NP_000319 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 KIK LS+G+ Sbjct: 141 KIKQLSAGS 149>NP_001274420 Length = 1795 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 +IK+ SSGA Sbjct: 756 QIKIESSGA 764>NP_001185882 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 ++KVL SGA Sbjct: 113 QLKVLLSGA 121>NP_076976 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 ++KVL SGA Sbjct: 113 QLKVLLSGA 121>XP_005272690 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 KIK LS+G+ Sbjct: 141 KIKQLSAGS 149>XP_006724601 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 KIK LS+G+ Sbjct: 141 KIKQLSAGS 149>XP_005271739 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IKVLSSGA 9 IK+L++GA Sbjct: 469 IKILNAGA 476>XP_005250117 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IKVLSSGA 9 I+VLSSG+ Sbjct: 537 IQVLSSGS 544>XP_005264244 Length = 1795 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIKVLSSGA 9 +IK+ SSGA Sbjct: 756 QIKIESSGA 764>NP_003469 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IKVLSSGA 9 IK+L++GA Sbjct: 528 IKILNAGA 535>NP_003583 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IKVLSSGA 9 I+VLSSG+ Sbjct: 537 IQVLSSGS 544Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.123 0.289 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 418,897 Number of extensions: 580 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |