Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 299 NP_001091680 20 299 NP_001091679 20 299 XP_006713048 20 299 XP_006713047 20 299 XP_006713046 20 299 XP_005264943 20 299 NP_054735 18 1482 NP_000375 17 2528 NP_060764 16 5631 NP_940905 16 5631 NP_001274748 16 5631 NP_001274749 16 5631 NP_065873 16 5631 NP_064450 16 5631 NP_001258932 16 5631 XP_006717257 16 5631 XP_006717256 16 5631 XP_005273257 16 5631 XP_006711358 16 5631 XP_006711357 16 5631 NP_075252 16 7355 NP_998812 16 7355 NP_002002 16 7355 NP_056163 16 7355 XP_005265895 16 7355 XP_005265894 16 7355 XP_005263969 16 7355 XP_005263968 16 7355 XP_005263967 16 7355 XP_005263966 16 7355 NP_931045 15 9605 NP_001137499 15 9605 NP_055249 15 9605 NP_001137500 15 9605 NP_001137498 15 9605 NP_031375 15 9605 NP_001431 15 9605 XP_006717822 15 9605 XP_006717119 15 9605 XP_005266123 15 9605 XP_006716365 15 9605 XP_005249598 15 9605 XP_005249596 15 9605 XP_005249594 15 9605 XP_005249593 15 9605>NP_001895 Length = 781 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KHVVVNLIN 9 KH VVNLIN Sbjct: 133 KHAVVNLIN 141>NP_001091680 Length = 781 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KHVVVNLIN 9 KH VVNLIN Sbjct: 133 KHAVVNLIN 141>NP_001091679 Length = 781 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KHVVVNLIN 9 KH VVNLIN Sbjct: 133 KHAVVNLIN 141>XP_006713048 Length = 720 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KHVVVNLIN 9 KH VVNLIN Sbjct: 133 KHAVVNLIN 141>XP_006713047 Length = 774 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KHVVVNLIN 9 KH VVNLIN Sbjct: 126 KHAVVNLIN 134>XP_006713046 Length = 774 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KHVVVNLIN 9 KH VVNLIN Sbjct: 126 KHAVVNLIN 134>XP_005264943 Length = 781 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KHVVVNLIN 9 KH VVNLIN Sbjct: 133 KHAVVNLIN 141>NP_054735 Length = 587 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KHVVVNLIN 9 K V++NLIN Sbjct: 301 KQVIINLIN 309>NP_000375 Length = 4563 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KHVVVNLI 8 KH V+NLI Sbjct: 2318 KHFVINLI 2325>NP_060764 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KHVVVNL 7 KH+VVN+ Sbjct: 339 KHLVVNI 345>NP_940905 Length = 1135 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KHVVVNLIN 9 KH + N+IN Sbjct: 174 KHALENMIN 182>NP_001274748 Length = 1111 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KHVVVNLIN 9 KH + N+IN Sbjct: 174 KHALENMIN 182>NP_001274749 Length = 1068 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KHVVVNLIN 9 KH + N+IN Sbjct: 174 KHALENMIN 182>NP_065873 Length = 1235 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KHVVVNLIN 9 KH + N+IN Sbjct: 246 KHALENMIN 254>NP_064450 Length = 1722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KHVVVNLIN 9 +H VVNL N Sbjct: 1383 QHAVVNLDN 1391>NP_001258932 Length = 1211 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KHVVVNLIN 9 KH + N+IN Sbjct: 198 KHALENMIN 206>XP_006717257 Length = 1083 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KHVVVNLIN 9 KH + N+IN Sbjct: 73 KHALENMIN 81>XP_006717256 Length = 1172 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KHVVVNLIN 9 KH + N+IN Sbjct: 162 KHALENMIN 170>XP_005273257 Length = 1726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KHVVVNLIN 9 +H VVNL N Sbjct: 1387 QHAVVNLDN 1395>XP_006711358 Length = 1118 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KHVVVNLIN 9 KH + N+IN Sbjct: 174 KHALENMIN 182>XP_006711357 Length = 1142 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KHVVVNLIN 9 KH + N+IN Sbjct: 174 KHALENMIN 182>NP_075252 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KHVVVN 6 KH+V+N Sbjct: 285 KHIVIN 290>NP_998812 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KHVVVN 6 KH+V+N Sbjct: 285 KHIVIN 290>NP_002002 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KHVVVN 6 KH+V+N Sbjct: 285 KHIVIN 290>NP_056163 Length = 1883 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KHVVVNLI 8 +H+++NLI Sbjct: 922 RHLILNLI 929>XP_005265895 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KHVVVN 6 KH+V+N Sbjct: 285 KHIVIN 290>XP_005265894 Length = 834 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KHVVVN 6 KH+V+N Sbjct: 317 KHIVIN 322>XP_005263969 Length = 1844 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KHVVVNLI 8 +H+++NLI Sbjct: 883 RHLILNLI 890>XP_005263968 Length = 1861 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KHVVVNLI 8 +H+++NLI Sbjct: 900 RHLILNLI 907>XP_005263967 Length = 1899 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KHVVVNLI 8 +H+++NLI Sbjct: 939 RHLILNLI 946>XP_005263966 Length = 1900 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KHVVVNLI 8 +H+++NLI Sbjct: 939 RHLILNLI 946>NP_931045 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KHVVVNLIN 9 KH++VN N Sbjct: 28 KHLLVNHFN 36>NP_001137499 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVNLIN 9 VVNLIN Sbjct: 45 VVNLIN 50>NP_055249 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVNLIN 9 VVNLIN Sbjct: 45 VVNLIN 50>NP_001137500 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVNLIN 9 VVNLIN Sbjct: 45 VVNLIN 50>NP_001137498 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVNLIN 9 VVNLIN Sbjct: 45 VVNLIN 50>NP_031375 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KHVVVNLIN 9 +H+V+NL++ Sbjct: 804 QHLVLNLLD 812>NP_001431 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 HVVVNL 7 HV++NL Sbjct: 273 HVIINL 278>XP_006717822 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KHVVVNLI 8 KH +VN++ Sbjct: 780 KHQIVNVV 787>XP_006717119 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVNLIN 9 VVNLIN Sbjct: 45 VVNLIN 50>XP_005266123 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVNLIN 9 VVNLIN Sbjct: 45 VVNLIN 50>XP_006716365 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 HVVVNL 7 HV++NL Sbjct: 273 HVIINL 278>XP_005249598 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KHVVVNLIN 9 +H+V+NL++ Sbjct: 757 QHLVLNLLD 765>XP_005249596 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KHVVVNLIN 9 +H+V+NL++ Sbjct: 770 QHLVLNLLD 778>XP_005249594 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KHVVVNLIN 9 +H+V+NL++ Sbjct: 770 QHLVLNLLD 778>XP_005249593 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KHVVVNLIN 9 +H+V+NL++ Sbjct: 804 QHLVLNLLD 812Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.141 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 455,465 Number of extensions: 825 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |