Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 19 665 NP_653080 19 665 XP_005267292 19 665 XP_005267291 19 665 XP_005267290 19 665 NP_001367 17 4312 NP_699179 16 5631 XP_005253923 16 5631 NP_036306 16 5631 NP_899236 16 7355 NP_001714 16 7355 NP_056363 16 7355 NP_001138241 16 7355 NP_036230 16 7355 NP_001138242 16 7355 NP_001073940 16 7355 XP_006717093 16 7355 XP_006715232 16 7355 XP_005249383 16 7355 XP_005249382 16 7355 XP_005249381 16 7355 XP_005249380 16 7355 XP_005249379 16 7355 XP_005249377 16 7355 XP_005249376 16 7355 XP_005249375 16 7355 XP_005249374 16 7355 XP_005249373 16 7355 XP_005249372 16 7355 XP_005249371 16 7355 XP_005249370 16 7355 XP_005249369 16 7355 XP_005249368 16 7355 XP_005249367 16 7355 XP_006711366 16 7355 XP_005245198 16 7355 XP_006711365 16 7355 XP_006711364 16 7355 NP_892021 15 9605 NP_001273384 15 9605 NP_068764 15 9605 XP_006724469 15 9605 XP_006715228 15 9605 XP_005249342 15 9605 XP_005270837 15 9605 XP_005270836 15 9605 NP_056297 15 9605>NP_005091 Length = 1782 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KGVVSEVEM 9 +GVVSEVEM Sbjct: 494 EGVVSEVEM 502>NP_653080 Length = 1684 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KGVVSEVEM 9 +GVVSEVEM Sbjct: 396 EGVVSEVEM 404>XP_005267292 Length = 1677 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KGVVSEVEM 9 +GVVSEVEM Sbjct: 389 EGVVSEVEM 397>XP_005267291 Length = 1684 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KGVVSEVEM 9 +GVVSEVEM Sbjct: 396 EGVVSEVEM 404>XP_005267290 Length = 1782 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KGVVSEVEM 9 +GVVSEVEM Sbjct: 494 EGVVSEVEM 502>NP_001367 Length = 4646 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GVVSEVE 8 G+VSEVE Sbjct: 1042 GIVSEVE 1048>NP_699179 Length = 598 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KGVVSEVE 8 KG VSE+E Sbjct: 199 KGAVSELE 206>XP_005253923 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KGVVSEVE 8 KG VSE+E Sbjct: 199 KGAVSELE 206>NP_036306 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KGVVSEVE 8 KG VSE+E Sbjct: 133 KGAVSELE 140>NP_899236 Length = 5497 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1335 KMLVSEIEM 1343>NP_001714 Length = 2649 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1009 KMLVSEIEM 1017>NP_056363 Length = 5171 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1009 KMLVSEIEM 1017>NP_001138241 Length = 5675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1513 KMLVSEIEM 1521>NP_036230 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GVVSEVEM 9 G+VSEV++ Sbjct: 115 GIVSEVKL 122>NP_001138242 Length = 5537 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1375 KMLVSEIEM 1383>NP_001073940 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 KG++SE E+ Sbjct: 904 KGLISEEEL 912>XP_006717093 Length = 274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GVVSEVEM 9 G+VSEV++ Sbjct: 115 GIVSEVKL 122>XP_006715232 Length = 7498 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1335 KMLVSEIEM 1343>XP_005249383 Length = 3186 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1546 KMLVSEIEM 1554>XP_005249382 Length = 5732 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1546 KMLVSEIEM 1554>XP_005249381 Length = 7281 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1009 KMLVSEIEM 1017>XP_005249380 Length = 7607 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1335 KMLVSEIEM 1343>XP_005249379 Length = 7633 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1361 KMLVSEIEM 1369>XP_005249377 Length = 7640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1368 KMLVSEIEM 1376>XP_005249376 Length = 7647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1375 KMLVSEIEM 1383>XP_005249375 Length = 7680 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1408 KMLVSEIEM 1416>XP_005249374 Length = 7709 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1546 KMLVSEIEM 1554>XP_005249373 Length = 7723 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1451 KMLVSEIEM 1459>XP_005249372 Length = 7785 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1513 KMLVSEIEM 1521>XP_005249371 Length = 7788 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1546 KMLVSEIEM 1554>XP_005249370 Length = 7794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1546 KMLVSEIEM 1554>XP_005249369 Length = 7797 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1525 KMLVSEIEM 1533>XP_005249368 Length = 7812 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1546 KMLVSEIEM 1554>XP_005249367 Length = 7818 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 K +VSE+EM Sbjct: 1546 KMLVSEIEM 1554>XP_006711366 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 KG++SE E+ Sbjct: 745 KGLISEEEL 753>XP_005245198 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 KG++SE E+ Sbjct: 904 KGLISEEEL 912>XP_006711365 Length = 1046 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 KG++SE E+ Sbjct: 913 KGLISEEEL 921>XP_006711364 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 KG++SE E+ Sbjct: 914 KGLISEEEL 922>NP_892021 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GVVSEVE 8 GVV EVE Sbjct: 545 GVVGEVE 551>NP_001273384 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KGVVSEVE 8 KGV+ E+E Sbjct: 118 KGVIPELE 125>NP_068764 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KGVVSEVE 8 KGV+ E+E Sbjct: 118 KGVIPELE 125>XP_006724469 Length = 2373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KGVVSEVEM 9 +GV +EVE+ Sbjct: 1930 RGVANEVEV 1938>XP_006715228 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KGVVSEVE 8 KGV+ E+E Sbjct: 102 KGVIPELE 109>XP_005249342 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KGVVSEVE 8 KGV+ E+E Sbjct: 399 KGVIPELE 406>XP_005270837 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GVVSEVE 8 GVV EVE Sbjct: 339 GVVGEVE 345>XP_005270836 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GVVSEVE 8 GVV EVE Sbjct: 339 GVVGEVE 345>NP_056297 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KGVVSEVE 8 KGV+ E+E Sbjct: 399 KGVIPELE 406Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.123 0.291 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 380,509 Number of extensions: 579 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |