Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 229 NP_001075109 21 229 NP_060546 17 4312 NP_001276949 17 4312 NP_004442 17 4312 NP_001269380 17 4312 NP_001269379 17 4312 XP_006718513 17 4312 XP_006718512 17 4312 XP_005252542 17 4312 XP_006717518 17 4312 XP_006717517 17 4312 XP_006717516 17 4312 NP_004765 16 5631 XP_006726449 16 5631 XP_005257522 16 5631 XP_006712222 16 5631 NP_001230013 16 7355 NP_851397 16 7355 NP_001521 16 7355 NP_898902 16 7355 NP_001073591 16 7355 NP_001073592 16 7355 NP_000302 16 7355 NP_001073590 16 7355 NP_001129689 16 7355 NP_060492 16 7355 NP_001017365 16 7355 XP_005273312 16 7355 XP_005273311 16 7355 XP_005273310 16 7355 XP_006710785 16 7355 XP_005245976 16 7355 NP_001129688 16 7355 NP_001129690 16 7355 NP_001017367 16 7355 NP_001017364 16 7355 NP_001017366 16 7355 NP_000707 16 7355 NP_001136272 15 9605 NP_055533 15 9605 NP_690593 15 9605 NP_001020242 15 9605 NP_001241 15 9605 NP_001164663 15 9605 NP_060181 15 9605 NP_001020241 15 9605 NP_005608 15 9605 NP_001519 15 9605 NP_001164664 15 9605 NP_055589 15 9605 NP_001164662 15 9605 NP_004834 15 9605 XP_005260676 15 9605 XP_006723952 15 9605 XP_005260675 15 9605 XP_005260674 15 9605 XP_006719226 15 9605 XP_006714853 15 9605 XP_005263207 15 9605 XP_005248023 15 9605 XP_005276064 15 9605 NP_065775 15 9605>NP_008835 Length = 4128 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KGSNRTETV 9 KG+NRTETV Sbjct: 3860 KGANRTETV 3868>NP_001075109 Length = 4097 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KGSNRTETV 9 KG+NRTETV Sbjct: 3829 KGANRTETV 3837>NP_060546 Length = 1044 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KGSNRTETV 9 KG N+T TV Sbjct: 462 KGGNQTATV 470>NP_001276949 Length = 1044 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KGSNRTETV 9 KG N+T TV Sbjct: 462 KGGNQTATV 470>NP_004442 Length = 423 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KGSNRTET 8 KGS+ TET Sbjct: 24 KGSSETET 31>NP_001269380 Length = 422 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KGSNRTET 8 KGS+ TET Sbjct: 24 KGSSETET 31>NP_001269379 Length = 423 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KGSNRTET 8 KGS+ TET Sbjct: 24 KGSSETET 31>XP_006718513 Length = 491 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KGSNRTET 8 KGS+ TET Sbjct: 93 KGSSETET 100>XP_006718512 Length = 492 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KGSNRTET 8 KGS+ TET Sbjct: 93 KGSSETET 100>XP_005252542 Length = 736 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KGSNRTETV 9 KG N+T TV Sbjct: 154 KGGNQTATV 162>XP_006717518 Length = 736 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KGSNRTETV 9 KG N+T TV Sbjct: 154 KGGNQTATV 162>XP_006717517 Length = 927 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KGSNRTETV 9 KG N+T TV Sbjct: 345 KGGNQTATV 353>XP_006717516 Length = 1012 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KGSNRTETV 9 KG N+T TV Sbjct: 430 KGGNQTATV 438>NP_004765 Length = 1581 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KGSNRTETV 9 KG+N+ +TV Sbjct: 921 KGNNQADTV 929>XP_006726449 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GSNRTET 8 GSN TET Sbjct: 375 GSNSTET 381>XP_005257522 Length = 1409 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KGSNRTETV 9 KG+N+ +TV Sbjct: 749 KGNNQADTV 757>XP_006712222 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GSNRTET 8 GSN TET Sbjct: 375 GSNSTET 381>NP_001230013 Length = 850 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GSNRTET 8 GSN TET Sbjct: 438 GSNDTET 444>NP_851397 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GSNRTET 8 GSN TET Sbjct: 414 GSNDTET 420>NP_001521 Length = 826 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GSNRTET 8 GSN TET Sbjct: 414 GSNDTET 420>NP_898902 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KGSNRTET 8 KG N TET Sbjct: 194 KGENFTET 201>NP_001073591 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KGSNRTET 8 KG N TET Sbjct: 194 KGENFTET 201>NP_001073592 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KGSNRTET 8 KG N TET Sbjct: 194 KGENFTET 201>NP_000302 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KGSNRTET 8 KG N TET Sbjct: 194 KGENFTET 201>NP_001073590 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KGSNRTET 8 KG N TET Sbjct: 194 KGENFTET 201>NP_001129689 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KGSNRTE 7 +GSN+TE Sbjct: 46 QGSNKTE 52>NP_060492 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KGSNRTE 7 +GSN+TE Sbjct: 46 QGSNKTE 52>NP_001017365 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KGSNRTE 7 KGSNR++ Sbjct: 114 KGSNRSQ 120>XP_005273312 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KGSNRTE 7 KGSNR++ Sbjct: 113 KGSNRSQ 119>XP_005273311 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KGSNRTE 7 KGSNR++ Sbjct: 114 KGSNRSQ 120>XP_005273310 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KGSNRTE 7 KGSNR++ Sbjct: 114 KGSNRSQ 120>XP_006710785 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KGSNRTE 7 +GSN+TE Sbjct: 46 QGSNKTE 52>XP_005245976 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KGSNRTE 7 +GSN+TE Sbjct: 46 QGSNKTE 52>NP_001129688 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KGSNRTE 7 +GSN+TE Sbjct: 46 QGSNKTE 52>NP_001129690 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KGSNRTE 7 +GSN+TE Sbjct: 46 QGSNKTE 52>NP_001017367 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KGSNRTE 7 KGSNR++ Sbjct: 114 KGSNRSQ 120>NP_001017364 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KGSNRTE 7 KGSNR++ Sbjct: 113 KGSNRSQ 119>NP_001017366 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KGSNRTE 7 KGSNR++ Sbjct: 113 KGSNRSQ 119>NP_000707 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KGSNRTE 7 KGSNR++ Sbjct: 114 KGSNRSQ 120>NP_001136272 Length = 3144 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KGSNRTETV 9 KGS TETV Sbjct: 2641 KGSFCTETV 2649>NP_055533 Length = 956 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KGSNRTET 8 KG N T+T Sbjct: 504 KGDNSTDT 511>NP_690593 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KGSNRTETV 9 KG++ T+T+ Sbjct: 94 KGTSETDTI 102>NP_001020242 Length = 151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GSNRTET 8 G NRT+T Sbjct: 101 GGNRTKT 107>NP_001241 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KGSNRTETV 9 KG++ T+T+ Sbjct: 94 KGTSETDTI 102>NP_001164663 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KGSNRTE 7 +G NRTE Sbjct: 412 QGGNRTE 418>NP_060181 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KGSNRTE 7 +G NRTE Sbjct: 412 QGGNRTE 418>NP_001020241 Length = 151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GSNRTET 8 G NRT+T Sbjct: 101 GGNRTKT 107>NP_005608 Length = 151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GSNRTET 8 G NRT+T Sbjct: 101 GGNRTKT 107>NP_001519 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GSNRTET 8 G NRTE+ Sbjct: 38 GGNRTES 44>NP_001164664 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KGSNRTE 7 +G NRTE Sbjct: 333 QGGNRTE 339>NP_055589 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SNRTETV 9 +NRT+TV Sbjct: 346 TNRTDTV 352>NP_001164662 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KGSNRTE 7 +G NRTE Sbjct: 333 QGGNRTE 339>NP_004834 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SNRTETV 9 SN+T+TV Sbjct: 75 SNKTQTV 81>XP_005260676 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KGSNRTETV 9 KG++ T+T+ Sbjct: 94 KGTSETDTI 102>XP_006723952 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KGSNRTETV 9 KG++ T+T+ Sbjct: 94 KGTSETDTI 102>XP_005260675 Length = 237 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KGSNRTETV 9 KG++ T+T+ Sbjct: 94 KGTSETDTI 102>XP_005260674 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KGSNRTETV 9 KG++ T+T+ Sbjct: 94 KGTSETDTI 102>XP_006719226 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KGSNRTET 8 KG N T+T Sbjct: 516 KGDNSTDT 523>XP_006714853 Length = 178 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GSNRTET 8 G NRT+T Sbjct: 101 GGNRTKT 107>XP_005263207 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSNRTETV 9 GSN ET+ Sbjct: 149 GSNTNETI 156>XP_005248023 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GSNRTET 8 G NRTE+ Sbjct: 38 GGNRTES 44>XP_005276064 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GSNRTET 8 G NRT+T Sbjct: 107 GGNRTKT 113>NP_065775 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSNRTETV 9 GSN ET+ Sbjct: 149 GSNTNETI 156Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.292 0.111 0.277 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 528,905 Number of extensions: 959 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |