Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 19 869 XP_005269721 19 869 NP_001273767 17 4312 NP_001501 17 4312 XP_006714258 17 4312 NP_001097 16 5631 XP_005265640 16 5631 NP_775913 16 7355 NP_065785 16 7355 XP_006719191 16 7355 XP_006719190 16 7355 XP_006719189 16 7355 XP_006719188 16 7355 XP_006719187 16 7355 XP_006719186 16 7355 XP_006719185 16 7355 XP_006719184 16 7355 XP_006719183 16 7355 XP_006719182 16 7355 XP_006719181 16 7355 XP_006719180 16 7355 XP_006719179 16 7355 XP_006710648 16 7355 NP_899199 15 9605 NP_001171547 15 9605 NP_001171548 15 9605 NP_001171546 15 9605 NP_001664 15 9605 NP_597680 15 9605 NP_775945 15 9605 NP_001191315 15 9605 NP_079455 15 9605 NP_001193698 15 9605 NP_001268885 15 9605 NP_443128 15 9605 NP_001136171 15 9605 NP_001120654 15 9605 NP_060601 15 9605 XP_006718502 15 9605 XP_006718501 15 9605 XP_005273867 15 9605 XP_005273863 15 9605 XP_006715526 15 9605 XP_005266998 15 9605 XP_006713583 15 9605 XP_005273221 15 9605 NP_001355 15 9605>NP_036462 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KGSLTDRRI 9 KGSLTD RI Sbjct: 650 KGSLTDGRI 658>XP_005269721 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KGSLTDRRI 9 KGSLTD RI Sbjct: 650 KGSLTDGRI 658>NP_001273767 Length = 912 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GSLTDRRI 9 GSLTD+++ Sbjct: 332 GSLTDKKL 339>NP_001501 Length = 1007 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GSLTDRRI 9 GSLTD+++ Sbjct: 427 GSLTDKKL 434>XP_006714258 Length = 994 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GSLTDRRI 9 GSLTD+++ Sbjct: 443 GSLTDKKL 450>NP_001097 Length = 512 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KGSLTD 6 KGSLTD Sbjct: 270 KGSLTD 275>XP_005265640 Length = 533 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KGSLTD 6 KGSLTD Sbjct: 291 KGSLTD 296>NP_775913 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 8 LTDRRI 13>NP_065785 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 12 LTDRRI 17>XP_006719191 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 12 LTDRRI 17>XP_006719190 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 12 LTDRRI 17>XP_006719189 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 12 LTDRRI 17>XP_006719188 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 12 LTDRRI 17>XP_006719187 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 12 LTDRRI 17>XP_006719186 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 12 LTDRRI 17>XP_006719185 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 12 LTDRRI 17>XP_006719184 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 12 LTDRRI 17>XP_006719183 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 12 LTDRRI 17>XP_006719182 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 12 LTDRRI 17>XP_006719181 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 12 LTDRRI 17>XP_006719180 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 12 LTDRRI 17>XP_006719179 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 12 LTDRRI 17>XP_006710648 Length = 220 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTDRRI 9 LTDRRI Sbjct: 8 LTDRRI 13>NP_899199 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KGSLTDRRI 9 K +TDRRI Sbjct: 245 KRLMTDRRI 253>NP_001171547 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KGSLTDRRI 9 K +TDRRI Sbjct: 162 KRLMTDRRI 170>NP_001171548 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KGSLTDRRI 9 K +TDRRI Sbjct: 162 KRLMTDRRI 170>NP_001171546 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KGSLTDRRI 9 K +TDRRI Sbjct: 224 KRLMTDRRI 232>NP_001664 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KGSLTDRRI 9 K +TDRRI Sbjct: 245 KRLMTDRRI 253>NP_597680 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KGSLTDRRI 9 K +TDRRI Sbjct: 245 KRLMTDRRI 253>NP_775945 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GSLTDRR 8 GSL+D+R Sbjct: 241 GSLSDKR 247>NP_001191315 Length = 892 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KGSLTDRR 8 KGS D+R Sbjct: 634 KGSFNDKR 641>NP_079455 Length = 1894 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KGSLTD 6 KGS+TD Sbjct: 1763 KGSITD 1768>NP_001193698 Length = 909 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KGSLTDRR 8 KGS D+R Sbjct: 664 KGSFNDKR 671>NP_001268885 Length = 3631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GSLTDRR 8 G+LT+RR Sbjct: 1838 GNLTERR 1844>NP_443128 Length = 3487 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GSLTDRR 8 G+LT+RR Sbjct: 1798 GNLTERR 1804>NP_001136171 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KGSLTDRR 8 KGS D+R Sbjct: 730 KGSFNDKR 737>NP_001120654 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KGSLTDR 7 KG LTD+ Sbjct: 48 KGKLTDK 54>NP_060601 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KGSLTDR 7 KG LTD+ Sbjct: 48 KGKLTDK 54>XP_006718502 Length = 743 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KGSLTDRR 8 KGS D+R Sbjct: 498 KGSFNDKR 505>XP_006718501 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KGSLTDRR 8 KGS D+R Sbjct: 583 KGSFNDKR 590>XP_005273867 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KGSLTDRR 8 KGS D+R Sbjct: 592 KGSFNDKR 599>XP_005273863 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KGSLTDRR 8 KGS D+R Sbjct: 645 KGSFNDKR 652>XP_006715526 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GSLTDRR 8 GSL+D+R Sbjct: 288 GSLSDKR 294>XP_005266998 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GSLTDRR 8 GSL+D+R Sbjct: 288 GSLSDKR 294>XP_006713583 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KGSLTDRR 8 KGS D+R Sbjct: 667 KGSFNDKR 674>XP_005273221 Length = 1974 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KGSLTD 6 KGS+TD Sbjct: 1843 KGSITD 1848>NP_001355 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KGSLTDRR 8 KGS D+R Sbjct: 625 KGSFNDKR 632Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.139 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 529,364 Number of extensions: 923 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |