Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000590 18 1935 NP_055524 17 2528 NP_065714 17 4312 XP_006720277 17 4312 XP_005271079 17 4312 XP_005271077 17 4312 NP_055204 16 5631 XP_006721566 16 5631 XP_005265948 16 5631 XP_005265947 16 5631 NP_775935 16 5631 NP_001153517 16 7355 NP_005260 16 7355 NP_001161081 16 7355 NP_001229436 16 7355 NP_620714 16 7355 NP_001229435 16 7355 NP_001229434 16 7355 NP_004284 16 7355 XP_005268856 16 7355 XP_006718519 16 7355 XP_006718518 16 7355 XP_006718517 16 7355 XP_006718516 16 7355 XP_005273885 16 7355 XP_005273884 16 7355 XP_005273883 16 7355 XP_005273882 16 7355 XP_006717389 16 7355 XP_005252374 16 7355 NP_004612 15 9605 NP_077270 15 9605 NP_001278147 15 9605 NP_065082 15 9605 NP_001123453 15 9605 NP_001278148 15 9605 NP_940908 15 9605 NP_004854 15 9605 NP_542376 15 9605 NP_004361 15 9605 XP_006726617 15 9605 XP_006720409 15 9605 XP_006718961 15 9605 XP_006715397 15 9605 XP_005249355 15 9605 XP_005263036 15 9605 XP_006710039 15 9605 NP_001004726 15 9605>NP_000590 Length = 272 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KFVGGKQN 8 KFVGG +N Sbjct: 164 KFVGGAEN 171>NP_055524 Length = 3546 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KFVGGKQNL 9 K +GGK N+ Sbjct: 3100 KLIGGKSNI 3108>NP_065714 Length = 214 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VGGKQNL 9 VGGKQ+L Sbjct: 64 VGGKQHL 70>XP_006720277 Length = 176 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VGGKQNL 9 VGGKQ+L Sbjct: 64 VGGKQHL 70>XP_005271079 Length = 264 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KFVGGKQN 8 K V GKQN Sbjct: 256 KIVSGKQN 263>XP_005271077 Length = 305 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KFVGGKQN 8 K V GKQN Sbjct: 297 KIVSGKQN 304>NP_055204 Length = 1180 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VGGKQNL 9 VGG QNL Sbjct: 129 VGGAQNL 135>XP_006721566 Length = 1212 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VGGKQNL 9 VGG QNL Sbjct: 181 VGGAQNL 187>XP_005265948 Length = 273 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VGGKQNL 9 +GG QNL Sbjct: 129 IGGSQNL 135>XP_005265947 Length = 276 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VGGKQNL 9 +GG QNL Sbjct: 129 IGGSQNL 135>NP_775935 Length = 244 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VGGKQNL 9 +GG QNL Sbjct: 129 IGGSQNL 135>NP_001153517 Length = 978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KFVGGKQ 7 KF+GG Q Sbjct: 801 KFLGGSQ 807>NP_005260 Length = 1106 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KFVGGKQ 7 KF+GG Q Sbjct: 929 KFLGGSQ 935>NP_001161081 Length = 1065 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KFVGGKQ 7 KF+GG Q Sbjct: 888 KFLGGSQ 894>NP_001229436 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FVGGKQ 7 +VGGKQ Sbjct: 367 YVGGKQ 372>NP_620714 Length = 752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGGKQN 8 F GGKQ+ Sbjct: 238 FAGGKQD 244>NP_001229435 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FVGGKQ 7 +VGGKQ Sbjct: 367 YVGGKQ 372>NP_001229434 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FVGGKQ 7 +VGGKQ Sbjct: 441 YVGGKQ 446>NP_004284 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FVGGKQ 7 +VGGKQ Sbjct: 441 YVGGKQ 446>XP_005268856 Length = 978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KFVGGKQ 7 KF+GG Q Sbjct: 801 KFLGGSQ 807>XP_006718519 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGGKQN 8 F GGKQ+ Sbjct: 238 FAGGKQD 244>XP_006718518 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGGKQN 8 F GGKQ+ Sbjct: 38 FAGGKQD 44>XP_006718517 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGGKQN 8 F GGKQ+ Sbjct: 238 FAGGKQD 244>XP_006718516 Length = 566 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGGKQN 8 F GGKQ+ Sbjct: 238 FAGGKQD 244>XP_005273885 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGGKQN 8 F GGKQ+ Sbjct: 238 FAGGKQD 244>XP_005273884 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGGKQN 8 F GGKQ+ Sbjct: 238 FAGGKQD 244>XP_005273883 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGGKQN 8 F GGKQ+ Sbjct: 153 FAGGKQD 159>XP_005273882 Length = 679 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGGKQN 8 F GGKQ+ Sbjct: 238 FAGGKQD 244>XP_006717389 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FVGGKQ 7 +VGGKQ Sbjct: 441 YVGGKQ 446>XP_005252374 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FVGGKQ 7 +VGGKQ Sbjct: 441 YVGGKQ 446>NP_004612 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 FVGGKQN 8 ++G KQN Sbjct: 659 YIGAKQN 665>NP_077270 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KFVGGKQ 7 K+VGG Q Sbjct: 116 KYVGGDQ 122>NP_001278147 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VGGKQNL 9 VGG QNL Sbjct: 195 VGGIQNL 201>NP_065082 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VGGKQNL 9 VGG QNL Sbjct: 109 VGGIQNL 115>NP_001123453 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VGGKQNL 9 VGG QNL Sbjct: 109 VGGIQNL 115>NP_001278148 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VGGKQNL 9 VGG QNL Sbjct: 195 VGGIQNL 201>NP_940908 Length = 679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GGKQNL 9 GGK+NL Sbjct: 447 GGKRNL 452>NP_004854 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FVGGKQNL 9 ++GGK+ L Sbjct: 387 YIGGKKEL 394>NP_542376 Length = 1899 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 VGGKQN 8 +GG+QN Sbjct: 637 IGGRQN 642>NP_004361 Length = 3063 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 VGGKQN 8 +GG+QN Sbjct: 1801 IGGRQN 1806>XP_006726617 Length = 1688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KFVGGKQN 8 +F+G KQN Sbjct: 1527 EFMGHKQN 1534>XP_006720409 Length = 1688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KFVGGKQN 8 +F+G KQN Sbjct: 1527 EFMGHKQN 1534>XP_006718961 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 FVGGKQN 8 ++G KQN Sbjct: 659 YIGAKQN 665>XP_006715397 Length = 2972 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 VGGKQN 8 +GG+QN Sbjct: 1710 IGGRQN 1715>XP_005249355 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KFVGGKQ 7 K+VGG Q Sbjct: 116 KYVGGDQ 122>XP_005263036 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GGKQNL 9 GGK+NL Sbjct: 264 GGKRNL 269>XP_006710039 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KFVGGKQN 8 +F+G KQN Sbjct: 1423 EFMGHKQN 1430>NP_001004726 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KFVGGK 6 +F+GGK Sbjct: 298 RFIGGK 303Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.144 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 648,906 Number of extensions: 830 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |