Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001120972 19 869 XP_006716051 19 869 NP_932765 17 4312 NP_056437 17 4312 NP_783161 16 7355 NP_056029 16 7355 NP_001157704 16 7355 XP_005273513 16 7355 XP_005273511 16 7355 XP_005273512 16 7355 XP_006715921 16 7355 XP_005250007 16 7355 NP_001177645 15 9605 NP_001254651 15 9605 NP_008878 15 9605 NP_004936 15 9605 NP_001005361 15 9605 NP_001005360 15 9605 NP_001005362 15 9605 NP_001107563 15 9605 NP_060141 15 9605 NP_001247 15 9605 XP_006722284 15 9605 XP_006722283 15 9605 XP_006722282 15 9605 XP_005257952 15 9605 XP_006722281 15 9605 XP_006722280 15 9605 XP_005257949 15 9605 XP_005265822 15 9605 NP_000803 15 9605>NP_001120972 Length = 1408 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KESLNIVSF 9 KE LNIVSF Sbjct: 759 KEPLNIVSF 767>XP_006716051 Length = 1427 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KESLNIVSF 9 KE LNIVSF Sbjct: 778 KEPLNIVSF 786>NP_932765 Length = 482 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KESLNIVSF 9 +ESLNIV + Sbjct: 214 EESLNIVKY 222>NP_056437 Length = 482 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KESLNIVSF 9 +ESLNIV + Sbjct: 214 EESLNIVKY 222>NP_783161 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KESLNIV 7 KE+LNIV Sbjct: 436 KETLNIV 442>NP_056029 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KESLNIV 7 K+SLNIV Sbjct: 375 KDSLNIV 381>NP_001157704 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KESLNIV 7 K+SLNIV Sbjct: 375 KDSLNIV 381>XP_005273513 Length = 681 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KESLNIV 7 K+SLNIV Sbjct: 345 KDSLNIV 351>XP_005273511 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KESLNIV 7 K+SLNIV Sbjct: 375 KDSLNIV 381>XP_005273512 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KESLNIV 7 K+SLNIV Sbjct: 375 KDSLNIV 381>XP_006715921 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KESLNIV 7 KE+LNIV Sbjct: 436 KETLNIV 442>XP_005250007 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KESLNIV 7 KE+LNIV Sbjct: 436 KETLNIV 442>NP_001177645 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KESLNIV 7 KE+LNI+ Sbjct: 730 KEALNII 736>NP_001254651 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KESLNIVS 8 KE+LN+++ Sbjct: 62 KEALNVIN 69>NP_008878 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KESLNIVS 8 KE+LN+++ Sbjct: 62 KEALNVIN 69>NP_004936 Length = 866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KESLNIV 7 KE+LNI+ Sbjct: 726 KEALNII 732>NP_001005361 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KESLNIV 7 KE+LNI+ Sbjct: 730 KEALNII 736>NP_001005360 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KESLNIV 7 KE+LNI+ Sbjct: 730 KEALNII 736>NP_001005362 Length = 866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KESLNIV 7 KE+LNI+ Sbjct: 726 KEALNII 732>NP_001107563 Length = 830 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KESLNIVS 8 KE++NI+S Sbjct: 488 KEAINILS 495>NP_060141 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ESLNIVSF 9 E LNI+SF Sbjct: 485 EVLNILSF 492>NP_001247 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KESLNIVS 8 KE++NI+S Sbjct: 482 KEAINILS 489>XP_006722284 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KESLNIVS 8 KE++NI+S Sbjct: 347 KEAINILS 354>XP_006722283 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KESLNIVS 8 KE++NI+S Sbjct: 400 KEAINILS 407>XP_006722282 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KESLNIVS 8 KE++NI+S Sbjct: 421 KEAINILS 428>XP_005257952 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KESLNIVS 8 KE++NI+S Sbjct: 421 KEAINILS 428>XP_006722281 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KESLNIVS 8 KE++NI+S Sbjct: 482 KEAINILS 489>XP_006722280 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KESLNIVS 8 KE++NI+S Sbjct: 482 KEAINILS 489>XP_005257949 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KESLNIVS 8 KE++NI+S Sbjct: 481 KEAINILS 488>XP_005265822 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KESLNIVS 8 KE+LN+++ Sbjct: 177 KEALNVIN 184>NP_000803 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KESLNIVSF 9 +ESL ++SF Sbjct: 7 RESLGLLSF 15Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.130 0.313 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 364,562 Number of extensions: 518 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |