Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001137236 17 3301 NP_001137235 17 3301 NP_570140 17 3301 NP_001127911 17 4312 NP_001127910 17 4312 NP_665696 17 4312 NP_001127909 17 4312 NP_000305 16 5631 NP_056212 16 5631 XP_006717990 16 5631 XP_006717989 16 5631 NP_001186127 16 7355 NP_060779 16 7355 NP_001172003 16 7355 NP_001171988 16 7355 NP_078893 16 7355 NP_055987 16 7355 NP_660289 16 7355 XP_005269573 16 7355 XP_005269572 16 7355 XP_006717349 16 7355 XP_005252266 16 7355 XP_005252265 16 7355 XP_005252264 16 7355 XP_006717348 16 7355 XP_006717347 16 7355 XP_006717346 16 7355 XP_005245087 16 7355 XP_005245086 16 7355 XP_005245085 16 7355 XP_005245084 16 7355 XP_006711302 16 7355 XP_005245083 16 7355 XP_005245082 16 7355 XP_005245081 16 7355 XP_005245080 16 7355 XP_005245079 16 7355 XP_005245077 16 7355 XP_005245076 16 7355 XP_006711301 16 7355 XP_005245075 16 7355 XP_005245074 16 7355 XP_005245073 16 7355 XP_005245072 16 7355 NP_060628 16 7355 NP_114432 15 9605 NP_006758 15 9605 NP_001770 15 9605 NP_001138294 15 9605 NP_699174 15 9605 XP_006719261 15 9605 NP_006567 15 9605 NP_005870 15 9605>NP_001137236 Length = 351 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KEIVSRKQK 9 KEI+S+KQ+ Sbjct: 99 KEILSKKQE 107>NP_001137235 Length = 318 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KEIVSRKQK 9 KEI+S+KQ+ Sbjct: 99 KEILSKKQE 107>NP_570140 Length = 282 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KEIVSRKQK 9 KEI+S+KQ+ Sbjct: 63 KEILSKKQE 71>NP_001127911 Length = 1253 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 + IVSRK+K Sbjct: 756 RNIVSRKEK 764>NP_001127910 Length = 1253 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 + IVSRK+K Sbjct: 756 RNIVSRKEK 764>NP_665696 Length = 1210 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 + IVSRK+K Sbjct: 713 RNIVSRKEK 721>NP_001127909 Length = 1237 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 + IVSRK+K Sbjct: 740 RNIVSRKEK 748>NP_000305 Length = 403 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KEIVSR ++ Sbjct: 6 KEIVSRNKR 14>NP_056212 Length = 453 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KEIVSRKQK 9 +++VSRK+K Sbjct: 3 RKVVSRKRK 11>XP_006717990 Length = 175 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KEIVSR ++ Sbjct: 6 KEIVSRNKR 14>XP_006717989 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KEIVSR ++ Sbjct: 6 KEIVSRNKR 14>NP_001186127 Length = 699 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KEIVSRK 7 +EIVSRK Sbjct: 621 REIVSRK 627>NP_060779 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KEIVSRK 7 +EIVSRK Sbjct: 606 REIVSRK 612>NP_001172003 Length = 1259 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KE+VSR+ K Sbjct: 455 KELVSRELK 463>NP_001171988 Length = 1495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KE+VSR+ K Sbjct: 578 KELVSRELK 586>NP_078893 Length = 1495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KE+VSR+ K Sbjct: 578 KELVSRELK 586>NP_055987 Length = 2817 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1683 EVVSKKQQ 1690>NP_660289 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KEI S+K+K Sbjct: 225 KEIKSKKRK 233>XP_005269573 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KEI S+K+K Sbjct: 225 KEIKSKKRK 233>XP_005269572 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KEI S+K+K Sbjct: 225 KEIKSKKRK 233>XP_006717349 Length = 1046 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KE+VSR+ K Sbjct: 578 KELVSRELK 586>XP_005252266 Length = 1046 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KE+VSR+ K Sbjct: 578 KELVSRELK 586>XP_005252265 Length = 1381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KE+VSR+ K Sbjct: 578 KELVSRELK 586>XP_005252264 Length = 1478 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KE+VSR+ K Sbjct: 578 KELVSRELK 586>XP_006717348 Length = 1541 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KE+VSR+ K Sbjct: 578 KELVSRELK 586>XP_006717347 Length = 1541 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KE+VSR+ K Sbjct: 578 KELVSRELK 586>XP_006717346 Length = 1541 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KE+VSR+ K Sbjct: 578 KELVSRELK 586>XP_005245087 Length = 2708 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1685 EVVSKKQQ 1692>XP_005245086 Length = 2714 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1685 EVVSKKQQ 1692>XP_005245085 Length = 2718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1685 EVVSKKQQ 1692>XP_005245084 Length = 2719 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1685 EVVSKKQQ 1692>XP_006711302 Length = 2754 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1685 EVVSKKQQ 1692>XP_005245083 Length = 2774 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1685 EVVSKKQQ 1692>XP_005245082 Length = 2779 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1685 EVVSKKQQ 1692>XP_005245081 Length = 2819 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1685 EVVSKKQQ 1692>XP_005245080 Length = 2824 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1685 EVVSKKQQ 1692>XP_005245079 Length = 2838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1685 EVVSKKQQ 1692>XP_005245077 Length = 2858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1685 EVVSKKQQ 1692>XP_005245076 Length = 2869 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1685 EVVSKKQQ 1692>XP_006711301 Length = 2896 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1683 EVVSKKQQ 1690>XP_005245075 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1680 EVVSKKQQ 1687>XP_005245074 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1685 EVVSKKQQ 1692>XP_005245073 Length = 2901 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1683 EVVSKKQQ 1690>XP_005245072 Length = 2903 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EIVSRKQK 9 E+VS+KQ+ Sbjct: 1685 EVVSKKQQ 1692>NP_060628 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 +E VSRK+K Sbjct: 446 QEAVSRKRK 454>NP_114432 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IVSRKQK 9 I+SRK+K Sbjct: 962 IISRKEK 968>NP_006758 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EIVSRKQK 9 EIV RKQ+ Sbjct: 627 EIVRRKQQ 634>NP_001770 Length = 250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KE++ +KQK Sbjct: 52 KEVLWKKQK 60>NP_001138294 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KE++ +KQK Sbjct: 52 KEVLWKKQK 60>NP_699174 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KEIVSRKQK 9 KEIVSR K Sbjct: 51 KEIVSRGVK 59>XP_006719261 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EIVSRKQK 9 EI+ +KQK Sbjct: 240 EIIDQKQK 247>NP_006567 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EIVSRKQK 9 EI+ +KQK Sbjct: 240 EIIDQKQK 247>NP_005870 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KEIVSRKQK 9 KEI+S K+K Sbjct: 262 KEIMSLKKK 270Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.119 0.268 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 478,617 Number of extensions: 1194 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |