Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001138389 18 1135 NP_001138390 18 1135 NP_001138386 18 1135 NP_001138387 18 1135 NP_000132 18 1135 NP_075259 18 1135 NP_001138388 18 1135 NP_001138391 18 1135 NP_001138385 18 1135 NP_075418 18 1135 XP_006717776 18 1135 XP_006717775 18 1135 XP_006717774 18 1135 XP_006717773 18 1135 XP_006717772 18 1135 XP_006717771 18 1135 NP_004250 17 4312 XP_005257879 17 4312 XP_006722249 17 4312 XP_005257875 17 4312 NP_085152 16 7355 XP_005244773 16 7355 XP_005244772 16 7355 XP_005244771 16 7355 XP_006710392 16 7355 NP_060887 15 9605 XP_005245387 15 9605 XP_005245386 15 9605 XP_006711512 15 9605>NP_001138389 Length = 705 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 393 KEAVTVAVK 401>NP_001138390 Length = 704 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 392 KEAVTVAVK 400>NP_001138386 Length = 709 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 397 KEAVTVAVK 405>NP_001138387 Length = 707 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 420 KEAVTVAVK 428>NP_000132 Length = 821 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 509 KEAVTVAVK 517>NP_075259 Length = 822 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 510 KEAVTVAVK 518>NP_001138388 Length = 706 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 394 KEAVTVAVK 402>NP_001138391 Length = 680 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 421 KEAVTVAVK 429>NP_001138385 Length = 769 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 510 KEAVTVAVK 518>NP_075418 Length = 732 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 420 KEAVTVAVK 428>XP_006717776 Length = 806 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 528 KEAVTVAVK 536>XP_006717775 Length = 726 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 414 KEAVTVAVK 422>XP_006717774 Length = 752 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 440 KEAVTVAVK 448>XP_006717773 Length = 807 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 529 KEAVTVAVK 537>XP_006717772 Length = 838 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 526 KEAVTVAVK 534>XP_006717771 Length = 839 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KEAVTVVVK 9 KEAVTV VK Sbjct: 527 KEAVTVAVK 535>NP_004250 Length = 991 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KEAVTVVVK 9 KEA VVVK Sbjct: 913 KEAANVVVK 921>XP_005257879 Length = 586 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KEAVTVVVK 9 KEA VVVK Sbjct: 508 KEAANVVVK 516>XP_006722249 Length = 607 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KEAVTVVVK 9 KEA VVVK Sbjct: 529 KEAANVVVK 537>XP_005257875 Length = 1012 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KEAVTVVVK 9 KEA VVVK Sbjct: 934 KEAANVVVK 942>NP_085152 Length = 834 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KEAVTVVV 8 K+A+TVVV Sbjct: 305 KDALTVVV 312>XP_005244773 Length = 792 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KEAVTVVV 8 K+A+TVVV Sbjct: 263 KDALTVVV 270>XP_005244772 Length = 801 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KEAVTVVV 8 K+A+TVVV Sbjct: 305 KDALTVVV 312>XP_005244771 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KEAVTVVV 8 K+A+TVVV Sbjct: 273 KDALTVVV 280>XP_006710392 Length = 834 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KEAVTVVV 8 K+A+TVVV Sbjct: 305 KDALTVVV 312>NP_060887 Length = 1610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KEAVTVVVK 9 K +TVV+K Sbjct: 113 KNIITVVIK 121>XP_005245387 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KEAVTVVVK 9 K +TVV+K Sbjct: 113 KNIITVVIK 121>XP_005245386 Length = 1518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KEAVTVVVK 9 K +TVV+K Sbjct: 21 KNIITVVIK 29>XP_006711512 Length = 1547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KEAVTVVVK 9 K +TVV+K Sbjct: 113 KNIITVVIK 121Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.121 0.272 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 233,642 Number of extensions: 223 Number of successful extensions: 29 Number of sequences better than 10000.0: 29 Number of HSP's gapped: 29 Number of HSP's successfully gapped: 29 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |