Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 665 NP_671714 19 665 XP_006715890 19 665 XP_005250160 19 665 XP_005250159 19 665 NP_055426 17 2528 XP_005248757 17 2528 XP_006715468 17 2528 XP_005248756 17 2528 XP_006715467 17 2528 NP_001093207 17 3301 NP_115708 17 3301 NP_665872 17 4312 NP_001191439 16 7355 NP_055750 16 7355 NP_000783 16 7355 NP_002282 16 7355 XP_006711286 16 7355 XP_005245025 16 7355 XP_005245024 16 7355 XP_006711285 16 7355 XP_006711284 16 7355 XP_006711283 16 7355 XP_006711282 16 7355 XP_006711280 16 7355 XP_006711279 16 7355 XP_006711278 16 7355 XP_006711277 16 7355 XP_005245023 16 7355 XP_006711276 16 7355 XP_006711275 16 7355 NP_001034805 16 7355 NP_001034804 16 7355 NP_055733 15 9605 NP_001273063 15 9605 NP_068751 15 9605 NP_110399 15 9605 NP_001263281 15 9605 NP_665698 15 9605 NP_061862 15 9605 NP_054729 15 9605 XP_006718333 15 9605 XP_005253109 15 9605 XP_005268525 15 9605 XP_005268524 15 9605 XP_006714850 15 9605 XP_005268523 15 9605 XP_006713075 15 9605 XP_005264983 15 9605 XP_005264981 15 9605 XP_005264980 15 9605 XP_006713074 15 9605 XP_005264979 15 9605 XP_005264978 15 9605 NP_115485 15 9605>NP_005742 Length = 3907 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 KDTTELM K Sbjct: 936 KDTTELMEK 944>NP_671714 Length = 3899 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 KDTTELM K Sbjct: 936 KDTTELMEK 944>XP_006715890 Length = 3860 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 KDTTELM K Sbjct: 936 KDTTELMEK 944>XP_005250160 Length = 3939 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 KDTTELM K Sbjct: 936 KDTTELMEK 944>XP_005250159 Length = 3952 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 KDTTELM K Sbjct: 936 KDTTELMEK 944>NP_055426 Length = 5596 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DTTELMG 8 DTTEL+G Sbjct: 2097 DTTELLG 2103>XP_005248757 Length = 3591 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DTTELMG 8 DTTEL+G Sbjct: 92 DTTELLG 98>XP_006715468 Length = 3744 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DTTELMG 8 DTTEL+G Sbjct: 245 DTTELLG 251>XP_005248756 Length = 3905 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DTTELMG 8 DTTEL+G Sbjct: 406 DTTELLG 412>XP_006715467 Length = 5550 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DTTELMG 8 DTTEL+G Sbjct: 2097 DTTELLG 2103>NP_001093207 Length = 315 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 KDT EL+G+ Sbjct: 220 KDTGELLGE 228>NP_115708 Length = 315 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 KDT EL+G+ Sbjct: 220 KDTGELLGE 228>NP_665872 Length = 417 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KDTTELMGK 9 KDT E +GK Sbjct: 213 KDTAEQVGK 221>NP_001191439 Length = 347 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TTELMGK 9 TT+L+GK Sbjct: 328 TTDLLGK 334>NP_055750 Length = 1048 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 528 QDTDKLLGK 536>NP_000783 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDTTELMG 8 +DTTEL G Sbjct: 83 EDTTELGG 90>NP_002282 Length = 1786 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KDTTELMGK 9 KD TE+M + Sbjct: 1258 KDVTEMMAQ 1266>XP_006711286 Length = 1021 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 450 QDTDKLLGK 458>XP_005245025 Length = 1156 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 636 QDTDKLLGK 644>XP_005245024 Length = 1177 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 656 QDTDKLLGK 664>XP_006711285 Length = 1193 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 622 QDTDKLLGK 630>XP_006711284 Length = 1193 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 622 QDTDKLLGK 630>XP_006711283 Length = 1193 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 622 QDTDKLLGK 630>XP_006711282 Length = 1227 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 656 QDTDKLLGK 664>XP_006711280 Length = 1251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 730 QDTDKLLGK 738>XP_006711279 Length = 1254 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 683 QDTDKLLGK 691>XP_006711278 Length = 1256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 685 QDTDKLLGK 693>XP_006711277 Length = 1280 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 730 QDTDKLLGK 738>XP_005245023 Length = 1281 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 710 QDTDKLLGK 718>XP_006711276 Length = 1283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 712 QDTDKLLGK 720>XP_006711275 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDTTELMGK 9 +DT +L+GK Sbjct: 730 QDTDKLLGK 738>NP_001034805 Length = 161 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDTTELMG 8 +DTTEL G Sbjct: 83 EDTTELGG 90>NP_001034804 Length = 201 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDTTELMG 8 +DTTEL G Sbjct: 83 EDTTELGG 90>NP_055733 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TTELMGK 9 TTE MGK Sbjct: 203 TTEEMGK 209>NP_001273063 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTTELMG 8 D+TE MG Sbjct: 298 DSTEFMG 304>NP_068751 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTTELMG 8 D+TE MG Sbjct: 298 DSTEFMG 304>NP_110399 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KDTTELMGK 9 KDT ++ GK Sbjct: 352 KDTHKIFGK 360>NP_001263281 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KDTTEL 6 KDTTE+ Sbjct: 134 KDTTEM 139>NP_665698 Length = 1320 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KDTTELMGK 9 KD LMGK Sbjct: 178 KDVLGLMGK 186>NP_061862 Length = 1060 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KDTTELMGK 9 +DTTEL K Sbjct: 917 EDTTELRKK 925>NP_054729 Length = 1288 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KDTTELMGK 9 K+TTEL K Sbjct: 884 KETTELGSK 892>XP_006718333 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTTELMG 8 D+TE MG Sbjct: 188 DSTEFMG 194>XP_005253109 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTTELMG 8 D+TE MG Sbjct: 302 DSTEFMG 308>XP_005268525 Length = 1005 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KDTTELMGK 9 +DTTEL K Sbjct: 862 EDTTELRKK 870>XP_005268524 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KDTTELMGK 9 +DTTEL K Sbjct: 863 EDTTELRKK 871>XP_006714850 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KDTTELMGK 9 +DTTEL K Sbjct: 906 EDTTELRKK 914>XP_005268523 Length = 1061 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KDTTELMGK 9 +DTTEL K Sbjct: 918 EDTTELRKK 926>XP_006713075 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KDTTELMGK 9 KD LMGK Sbjct: 178 KDVLGLMGK 186>XP_005264983 Length = 1209 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KDTTELMGK 9 KD LMGK Sbjct: 178 KDVLGLMGK 186>XP_005264981 Length = 1290 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KDTTELMGK 9 KD LMGK Sbjct: 178 KDVLGLMGK 186>XP_005264980 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KDTTELMGK 9 KD LMGK Sbjct: 178 KDVLGLMGK 186>XP_006713074 Length = 1318 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KDTTELMGK 9 KD LMGK Sbjct: 178 KDVLGLMGK 186>XP_005264979 Length = 1322 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KDTTELMGK 9 KD LMGK Sbjct: 178 KDVLGLMGK 186>XP_005264978 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KDTTELMGK 9 KD LMGK Sbjct: 178 KDVLGLMGK 186>NP_115485 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KDTTELMG 8 KD EL+G Sbjct: 15 KDAAELLG 22Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.122 0.315 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 473,403 Number of extensions: 903 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |