Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 18 1935 NP_001243397 18 1935 XP_005269721 18 1935 NP_001265097 17 3301 NP_057492 17 3301 NP_001265096 17 3301 NP_057166 17 3301 NP_001264044 16 5631 NP_878918 16 7355 NP_055995 16 7355 NP_037444 16 7355 NP_001093646 16 7355 XP_005259931 16 7355 XP_005259930 16 7355 XP_006720147 16 7355 XP_005267517 16 7355 XP_005267516 16 7355 XP_005267515 16 7355 XP_005267514 16 7355 XP_005267513 16 7355 XP_005267512 16 7355 XP_005267511 16 7355 XP_005245422 16 7355 NP_065821 16 7355 NP_208382 16 7355 NP_060354 15 9605 NP_005086 15 9605 XP_006711098 15 9605 XP_006711097 15 9605 XP_005271387 15 9605 XP_005271385 15 9605>NP_036462 Length = 2073 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KDLSSRLAV 9 KD SSRLAV Sbjct: 393 KDSSSRLAV 401>NP_001243397 Length = 1890 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KDLSSRLAV 9 KD SSRLAV Sbjct: 393 KDSSSRLAV 401>XP_005269721 Length = 2073 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KDLSSRLAV 9 KD SSRLAV Sbjct: 393 KDSSSRLAV 401>NP_001265097 Length = 510 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KD SSRLA Sbjct: 53 KDFSSRLA 60>NP_057492 Length = 587 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KD SSRLA Sbjct: 53 KDFSSRLA 60>NP_001265096 Length = 586 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KD SSRLA Sbjct: 53 KDFSSRLA 60>NP_057166 Length = 588 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KD SSRLA Sbjct: 54 KDFSSRLA 61>NP_001264044 Length = 4516 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KDLSSRLAV 9 KDL SRL++ Sbjct: 1601 KDLQSRLSL 1609>NP_878918 Length = 6907 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KDL +RLA Sbjct: 2340 KDLENRLA 2347>NP_055995 Length = 6885 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KDL +RLA Sbjct: 2340 KDLENRLA 2347>NP_037444 Length = 719 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KDLSSRLAV 9 +DLSS LAV Sbjct: 29 QDLSSGLAV 37>NP_001093646 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KDLSSRLAV 9 +DLSS LAV Sbjct: 29 QDLSSGLAV 37>XP_005259931 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KDLSSRLAV 9 +DLSS LAV Sbjct: 29 QDLSSGLAV 37>XP_005259930 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KDLSSRLAV 9 +DLSS LAV Sbjct: 29 QDLSSGLAV 37>XP_006720147 Length = 4788 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KDL +RLA Sbjct: 2340 KDLENRLA 2347>XP_005267517 Length = 6883 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KDL +RLA Sbjct: 2340 KDLENRLA 2347>XP_005267516 Length = 6884 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KDL +RLA Sbjct: 2340 KDLENRLA 2347>XP_005267515 Length = 6899 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KDL +RLA Sbjct: 2340 KDLENRLA 2347>XP_005267514 Length = 6908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KDL +RLA Sbjct: 2340 KDLENRLA 2347>XP_005267513 Length = 6921 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KDL +RLA Sbjct: 2340 KDLENRLA 2347>XP_005267512 Length = 6922 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KDL +RLA Sbjct: 2340 KDLENRLA 2347>XP_005267511 Length = 6922 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KDL +RLA Sbjct: 2340 KDLENRLA 2347>XP_005245422 Length = 1203 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KDL +RLA Sbjct: 1028 KDLKTRLA 1035>NP_065821 Length = 1203 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KDLSSRLA 8 KDL +RLA Sbjct: 1028 KDLKTRLA 1035>NP_208382 Length = 648 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KDLSSRLAV 9 KDL SRL V Sbjct: 587 KDLVSRLLV 595>NP_060354 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KDLSSR 6 KDLSSR Sbjct: 133 KDLSSR 138>NP_005086 Length = 1548 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KDLSSRL 7 KDL SRL Sbjct: 188 KDLDSRL 194>XP_006711098 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KDLSSRL 7 KDL SRL Sbjct: 156 KDLDSRL 162>XP_006711097 Length = 1542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KDLSSRL 7 KDL SRL Sbjct: 182 KDLDSRL 188>XP_005271387 Length = 1545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KDLSSRL 7 KDL SRL Sbjct: 185 KDLDSRL 191>XP_005271385 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KDLSSRL 7 KDL SRL Sbjct: 191 KDLDSRL 197Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.125 0.291 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 347,150 Number of extensions: 518 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |