Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 390 NP_001075109 20 390 NP_065750 18 1482 XP_005245421 18 1482 XP_006711532 18 1482 XP_005245420 18 1482 NP_001191230 17 4312 NP_001191232 17 4312 NP_001129488 17 4312 NP_001191231 17 4312 NP_001129603 17 4312 NP_958817 17 4312 NP_001129602 17 4312 NP_001129601 17 4312 NP_958816 17 4312 NP_000475 17 4312 NP_443161 17 4312 XP_006710380 17 4312 XP_005245788 17 4312 XP_006710379 17 4312 XP_006710378 17 4312 NP_055731 16 5631 NP_005411 16 5631 NP_079408 16 7355 NP_001269889 16 7355 NP_001253989 16 7355 NP_001253990 16 7355 NP_001253988 16 7355 NP_055563 16 7355 NP_001269888 16 7355 NP_060707 16 7355 XP_005256085 16 7355 XP_005256084 16 7355 XP_005256083 16 7355 XP_005256082 16 7355 XP_006714089 16 7355 XP_006714088 16 7355 XP_005262715 16 7355 NP_060766 16 7355 NP_001155047 16 7355 NP_055860 15 9605 XP_006717792 15 9605 XP_006717791 15 9605 XP_006717790 15 9605 XP_006717789 15 9605>NP_008835 Length = 4128 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KDDVLANRL 9 KD+VLANRL Sbjct: 2207 KDEVLANRL 2215Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 DDVLANR 8 DD++ NR Sbjct: 3180 DDIITNR 3186>NP_001075109 Length = 4097 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KDDVLANRL 9 KD+VLANRL Sbjct: 2207 KDEVLANRL 2215Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 DDVLANR 8 DD++ NR Sbjct: 3180 DDIITNR 3186>NP_065750 Length = 593 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 +DDVLA RL Sbjct: 24 RDDVLAKRL 32>XP_005245421 Length = 593 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 +DDVLA RL Sbjct: 24 RDDVLAKRL 32>XP_006711532 Length = 593 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 +DDVLA RL Sbjct: 24 RDDVLAKRL 32>XP_005245420 Length = 599 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 +DDVLA RL Sbjct: 30 RDDVLAKRL 38>NP_001191230 Length = 752 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DDVLANRL 9 DDVLAN + Sbjct: 574 DDVLANMI 581>NP_001191232 Length = 677 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DDVLANRL 9 DDVLAN + Sbjct: 499 DDVLANMI 506>NP_001129488 Length = 746 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DDVLANRL 9 DDVLAN + Sbjct: 550 DDVLANMI 557>NP_001191231 Length = 733 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DDVLANRL 9 DDVLAN + Sbjct: 555 DDVLANMI 562>NP_001129603 Length = 660 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DDVLANRL 9 DDVLAN + Sbjct: 464 DDVLANMI 471>NP_958817 Length = 695 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DDVLANRL 9 DDVLAN + Sbjct: 499 DDVLANMI 506>NP_001129602 Length = 714 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DDVLANRL 9 DDVLAN + Sbjct: 518 DDVLANMI 525>NP_001129601 Length = 639 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DDVLANRL 9 DDVLAN + Sbjct: 443 DDVLANMI 450>NP_958816 Length = 751 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DDVLANRL 9 DDVLAN + Sbjct: 555 DDVLANMI 562>NP_000475 Length = 770 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DDVLANRL 9 DDVLAN + Sbjct: 574 DDVLANMI 581>NP_443161 Length = 1412 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 K+DVL N+L Sbjct: 840 KEDVLNNKL 848>XP_006710380 Length = 1398 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 K+DVL N+L Sbjct: 826 KEDVLNNKL 834>XP_005245788 Length = 1434 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 K+DVL N+L Sbjct: 862 KEDVLNNKL 870>XP_006710379 Length = 1452 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 K+DVL N+L Sbjct: 862 KEDVLNNKL 870>XP_006710378 Length = 1478 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 K+DVL N+L Sbjct: 862 KEDVLNNKL 870>NP_055731 Length = 1503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DDVLANRL 9 DD+LA+R+ Sbjct: 905 DDILASRV 912>NP_005411 Length = 294 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 K+DV+ NR+ Sbjct: 70 KEDVIFNRI 78>NP_079408 Length = 1342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 KD++L N+L Sbjct: 1066 KDELLTNQL 1074>NP_001269889 Length = 1135 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 ++D+L NRL Sbjct: 981 QEDMLGNRL 989>NP_001253989 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DDVLANRL 9 DDV+ NR+ Sbjct: 187 DDVMENRV 194>NP_001253990 Length = 450 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DDVLANRL 9 DDV+ NR+ Sbjct: 192 DDVMENRV 199>NP_001253988 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DDVLANRL 9 DDV+ NR+ Sbjct: 200 DDVMENRV 207>NP_055563 Length = 470 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DDVLANRL 9 DDV+ NR+ Sbjct: 212 DDVMENRV 219>NP_001269888 Length = 1135 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 ++D+L NRL Sbjct: 981 QEDMLGNRL 989>NP_060707 Length = 1150 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 ++D+L NRL Sbjct: 996 QEDMLGNRL 1004>XP_005256085 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KDDVLAN 7 KD++LAN Sbjct: 310 KDNILAN 316>XP_005256084 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KDDVLAN 7 KD++LAN Sbjct: 478 KDNILAN 484>XP_005256083 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KDDVLAN 7 KD++LAN Sbjct: 331 KDNILAN 337>XP_005256082 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KDDVLAN 7 KD++LAN Sbjct: 478 KDNILAN 484>XP_006714089 Length = 1281 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 KD++L N+L Sbjct: 1066 KDELLTNQL 1074>XP_006714088 Length = 1283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 KD++L N+L Sbjct: 1007 KDELLTNQL 1015>XP_005262715 Length = 1320 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KDDVLANRL 9 KD++L N+L Sbjct: 1044 KDELLTNQL 1052>NP_060766 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KDDVLAN 7 KD++LAN Sbjct: 478 KDNILAN 484>NP_001155047 Length = 633 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KDDVLAN 7 KD++LAN Sbjct: 357 KDNILAN 363>NP_055860 Length = 1190 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KDDVLANRL 9 KDD NRL Sbjct: 264 KDDDFKNRL 272>XP_006717792 Length = 1184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KDDVLANRL 9 KDD NRL Sbjct: 264 KDDDFKNRL 272>XP_006717791 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KDDVLANRL 9 KDD NRL Sbjct: 335 KDDDFKNRL 343>XP_006717790 Length = 1255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KDDVLANRL 9 KDD NRL Sbjct: 335 KDDDFKNRL 343>XP_006717789 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KDDVLANRL 9 KDD NRL Sbjct: 335 KDDDFKNRL 343Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.139 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 472,092 Number of extensions: 600 Number of successful extensions: 47 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |