Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 21 229 XP_006714104 21 229 XP_005265800 21 229 XP_006714103 21 229 XP_006714102 21 229 XP_006714837 17 4312 NP_003787 16 5631 NP_001239570 16 5631 XP_005259420 16 5631 XP_005259419 16 5631 NP_722520 16 7355 NP_055845 16 7355 XP_005248148 16 7355 XP_005248147 16 7355 XP_005248146 16 7355 XP_005248145 16 7355 XP_005248144 16 7355 XP_005248143 16 7355 XP_005248142 16 7355 XP_005248141 16 7355 XP_005248140 16 7355 XP_005248139 16 7355 NP_060396 15 9605 NP_976241 15 9605 NP_001269721 15 9605 NP_060442 15 9605 XP_006720255 15 9605 XP_006720254 15 9605 XP_005265090 15 9605 XP_005265088 15 9605 XP_005246837 15 9605 XP_005246836 15 9605 XP_006712758 15 9605 XP_005246834 15 9605 XP_005246720 15 9605 XP_006712229 15 9605 XP_006712228 15 9605 XP_005276116 15 9605 NP_001035869 15 9605 NP_060559 15 9605 NP_056281 15 9605>NP_006197 Length = 1089 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KCAARQATR 9 +CAARQATR Sbjct: 289 ECAARQATR 297>XP_006714104 Length = 832 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KCAARQATR 9 +CAARQATR Sbjct: 314 ECAARQATR 322>XP_005265800 Length = 1089 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KCAARQATR 9 +CAARQATR Sbjct: 289 ECAARQATR 297>XP_006714103 Length = 1111 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KCAARQATR 9 +CAARQATR Sbjct: 311 ECAARQATR 319>XP_006714102 Length = 1114 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KCAARQATR 9 +CAARQATR Sbjct: 314 ECAARQATR 322>XP_006714837 Length = 628 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KCAARQATR 9 KC+ QAT+ Sbjct: 600 KCSCNQATK 608>NP_003787 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KCAARQA 7 KC+A+QA Sbjct: 107 KCSAKQA 113>NP_001239570 Length = 475 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KCAARQA 7 KC+A+QA Sbjct: 89 KCSAKQA 95>XP_005259420 Length = 493 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KCAARQA 7 KC+A+QA Sbjct: 107 KCSAKQA 113>XP_005259419 Length = 517 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KCAARQA 7 KC+A+QA Sbjct: 89 KCSAKQA 95>NP_722520 Length = 1006 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CAARQAT 8 CA+RQ T Sbjct: 264 CASRQGT 270>NP_055845 Length = 3013 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CAARQATR 9 C++R ATR Sbjct: 696 CSSRPATR 703>XP_005248148 Length = 3028 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CAARQATR 9 C++R ATR Sbjct: 711 CSSRPATR 718>XP_005248147 Length = 3028 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CAARQATR 9 C++R ATR Sbjct: 711 CSSRPATR 718>XP_005248146 Length = 3073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CAARQATR 9 C++R ATR Sbjct: 803 CSSRPATR 810>XP_005248145 Length = 3079 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CAARQATR 9 C++R ATR Sbjct: 762 CSSRPATR 769>XP_005248144 Length = 3099 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CAARQATR 9 C++R ATR Sbjct: 788 CSSRPATR 795>XP_005248143 Length = 3105 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CAARQATR 9 C++R ATR Sbjct: 788 CSSRPATR 795>XP_005248142 Length = 3114 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CAARQATR 9 C++R ATR Sbjct: 803 CSSRPATR 810>XP_005248141 Length = 3119 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CAARQATR 9 C++R ATR Sbjct: 803 CSSRPATR 810>XP_005248140 Length = 3119 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CAARQATR 9 C++R ATR Sbjct: 803 CSSRPATR 810>XP_005248139 Length = 3120 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CAARQATR 9 C++R ATR Sbjct: 803 CSSRPATR 810>NP_060396 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CAARQA 7 C+ARQA Sbjct: 395 CSARQA 400>NP_976241 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KCAARQATR 9 +C+++QA R Sbjct: 250 RCSSKQAKR 258>NP_001269721 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARQATR 9 ARQATR Sbjct: 402 ARQATR 407>NP_060442 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CAARQA 7 C+ARQA Sbjct: 390 CSARQA 395>XP_006720255 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CAARQA 7 C+ARQA Sbjct: 395 CSARQA 400>XP_006720254 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CAARQA 7 C+ARQA Sbjct: 390 CSARQA 395>XP_005265090 Length = 1510 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CAARQATR 9 C AR+A R Sbjct: 571 CQAREAAR 578>XP_005265088 Length = 1694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CAARQATR 9 C AR+A R Sbjct: 755 CQAREAAR 762>XP_005246837 Length = 1277 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KCAARQATR 9 +C+++QA R Sbjct: 250 RCSSKQAKR 258>XP_005246836 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KCAARQATR 9 +C+++QA R Sbjct: 250 RCSSKQAKR 258>XP_006712758 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KCAARQATR 9 +C+++QA R Sbjct: 250 RCSSKQAKR 258>XP_005246834 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KCAARQATR 9 +C+++QA R Sbjct: 250 RCSSKQAKR 258>XP_005246720 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARQATR 9 ARQATR Sbjct: 547 ARQATR 552>XP_006712229 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARQATR 9 ARQATR Sbjct: 414 ARQATR 419>XP_006712228 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARQATR 9 ARQATR Sbjct: 16 ARQATR 21>XP_005276116 Length = 75 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARQATR 9 ARQATR Sbjct: 16 ARQATR 21>NP_001035869 Length = 726 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARQATR 9 ARQATR Sbjct: 612 ARQATR 617>NP_060559 Length = 726 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARQATR 9 ARQATR Sbjct: 612 ARQATR 617>NP_056281 Length = 1636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CAARQATR 9 C AR+A R Sbjct: 697 CQAREAAR 704Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.116 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 390,891 Number of extensions: 345 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |