Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003728 16 5631 NP_001139754 16 5631 NP_001395 16 5631 XP_006726673 16 5631 XP_005268081 16 5631 XP_005253264 16 5631 NP_003127 16 5631 NP_005935 16 7355 NP_000739 16 7355 NP_001004196 16 7355 NP_919047 16 7355 NP_000183 16 7355 NP_852259 16 7355 NP_542448 16 7355 NP_001240704 16 7355 NP_776152 16 7355 NP_078953 16 7355 XP_005269575 16 7355 XP_005250598 16 7355 XP_005247548 16 7355 XP_006713711 16 7355 XP_005247539 16 7355 XP_005247538 16 7355 XP_006711206 16 7355 NP_848547 15 9605 NP_000607 15 9605 NP_001258358 15 9605 NP_001258357 15 9605 NP_055862 15 9605 NP_001258356 15 9605 NP_001186125 15 9605 NP_008980 15 9605 NP_001184162 15 9605 NP_940685 15 9605 NP_078939 15 9605 NP_219483 15 9605 XP_005260215 15 9605 XP_005260214 15 9605 XP_006721193 15 9605 XP_006721192 15 9605 XP_005245845 15 9605 XP_005245844 15 9605 NP_543146 15 9605 NP_001094070 15 9605>NP_003728 Length = 3298 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KARVPFQH 8 +ARVPF + Sbjct: 2768 RARVPFDY 2775>NP_001139754 Length = 455 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KARVPF 6 KAR+PF Sbjct: 105 KARIPF 110>NP_001395 Length = 437 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KARVPFQHI 9 KA+ PF H+ Sbjct: 275 KAKDPFAHL 283>XP_006726673 Length = 1138 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 KARVPFQH 8 + R+PF H Sbjct: 618 RLRIPFHH 625>XP_005268081 Length = 447 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KARVPF 6 KAR+PF Sbjct: 154 KARIPF 159>XP_005253264 Length = 3443 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KARVPFQH 8 +ARVPF + Sbjct: 2913 RARVPFDY 2920>NP_003127 Length = 504 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KARVPF 6 KAR+PF Sbjct: 154 KARIPF 159>NP_005935 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RVPFQHI 9 R+PF H+ Sbjct: 7 RMPFSHL 13>NP_000739 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KARVPFQHI 9 K R+P +HI Sbjct: 104 KVRLPSKHI 112>NP_001004196 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RVPFQHI 9 R+PF H+ Sbjct: 32 RMPFSHL 38>NP_919047 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KARVPFQHI 9 +A+ PF HI Sbjct: 90 RAQSPFTHI 98>NP_000183 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 RVPFQH 8 R+P+QH Sbjct: 420 RLPYQH 425>NP_852259 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 RVPFQH 8 R+P+QH Sbjct: 420 RLPYQH 425>NP_542448 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 RVPFQH 8 R+P+QH Sbjct: 370 RLPYQH 375>NP_001240704 Length = 248 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KARVPFQHI 9 +A+ PF HI Sbjct: 90 RAQSPFTHI 98>NP_776152 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 RVPFQH 8 RVPF H Sbjct: 235 RVPFTH 240>NP_078953 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KARVPFQHI 9 ++R+P QH+ Sbjct: 667 RSRMPTQHL 675>XP_005269575 Length = 1113 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 RVPFQH 8 RVPF H Sbjct: 235 RVPFTH 240>XP_005250598 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KARVPFQHI 9 +A+ PF HI Sbjct: 27 RAQSPFTHI 35>XP_005247548 Length = 151 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RVPFQHI 9 R+PF H+ Sbjct: 7 RMPFSHL 13>XP_006713711 Length = 176 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RVPFQHI 9 R+PF H+ Sbjct: 32 RMPFSHL 38>XP_005247539 Length = 278 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RVPFQHI 9 R+PF H+ Sbjct: 7 RMPFSHL 13>XP_005247538 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RVPFQHI 9 R+PF H+ Sbjct: 32 RMPFSHL 38>XP_006711206 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KARVPFQHI 9 K R+P +HI Sbjct: 104 KVRLPSKHI 112>NP_848547 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ARVPFQHI 9 ARVPF I Sbjct: 617 ARVPFTDI 624>NP_000607 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VPFQHI 9 VPF+H+ Sbjct: 5 VPFRHL 10>NP_001258358 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 VPFQHI 9 VPF H+ Sbjct: 170 VPFSHV 175>NP_001258357 Length = 992 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 VPFQHI 9 VPF H+ Sbjct: 192 VPFSHV 197>NP_055862 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 VPFQHI 9 VPF H+ Sbjct: 192 VPFSHV 197>NP_001258356 Length = 992 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 VPFQHI 9 VPF H+ Sbjct: 192 VPFSHV 197>NP_001186125 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 RVPFQH 8 RVPF H Sbjct: 256 RVPFGH 261>NP_008980 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RVPFQHI 9 R PF+H+ Sbjct: 352 RCPFRHL 358>NP_001184162 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RVPFQHI 9 R PF+H+ Sbjct: 291 RCPFRHL 297>NP_940685 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 3 RVPFQH 8 R+PF H Sbjct: 207 RIPFAH 212>NP_078939 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 RVPFQHI 9 RVP+ H+ Sbjct: 33 RVPWSHV 39>NP_219483 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 RVPFQH 8 RVPF H Sbjct: 231 RVPFGH 236>XP_005260215 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 RVPFQH 8 RVPF H Sbjct: 231 RVPFGH 236>XP_005260214 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 RVPFQH 8 RVPF H Sbjct: 231 RVPFGH 236>XP_006721193 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ARVPFQHI 9 ARVPF I Sbjct: 367 ARVPFTDI 374>XP_006721192 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ARVPFQHI 9 ARVPF I Sbjct: 619 ARVPFTDI 626>XP_005245845 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 VPFQHI 9 VPF H+ Sbjct: 192 VPFSHV 197>XP_005245844 Length = 996 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 VPFQHI 9 VPF H+ Sbjct: 192 VPFSHV 197>NP_543146 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 VPFQHI 9 +PF HI Sbjct: 58 IPFDHI 63>NP_001094070 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 3 RVPFQH 8 R+PF H Sbjct: 231 RIPFAH 236Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.144 0.461 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 644,416 Number of extensions: 812 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |