Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 509 NP_000170 20 509 NP_001268422 20 509 NP_001268423 20 509 XP_005264328 20 509 NP_056386 16 5631 NP_001035150 16 5631 XP_006715520 16 5631 XP_005247500 16 5631 NP_001093879 16 5631 NP_004780 16 7355 NP_005236 16 7355 NP_001014434 16 7355 NP_001008781 16 7355 XP_006718827 16 7355 XP_006717386 16 7355 XP_006714202 16 7355 XP_005262892 16 7355 XP_005262891 16 7355 XP_005245407 16 7355 XP_006711523 16 7355 XP_005245406 16 7355 XP_006711522 16 7355 NP_064589 16 7355 NP_001870 15 9605 NP_060641 15 9605 NP_001238833 15 9605 NP_624302 15 9605 NP_001027019 15 9605 NP_001238834 15 9605 NP_001272369 15 9605 NP_689969 15 9605 NP_001272368 15 9605 NP_001192210 15 9605 XP_005276585 15 9605 XP_370934 15 9605 XP_006719535 15 9605 XP_005269058 15 9605 XP_005248335 15 9605 XP_006714526 15 9605 XP_006713764 15 9605 XP_006713763 15 9605 XP_001716413 15 9605 NP_006230 15 9605>NP_001268421 Length = 1230 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KAQKTGLIT 9 KA+KTGLIT Sbjct: 790 KARKTGLIT 798>NP_000170 Length = 1360 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KAQKTGLIT 9 KA+KTGLIT Sbjct: 920 KARKTGLIT 928>NP_001268422 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KAQKTGLIT 9 KA+KTGLIT Sbjct: 618 KARKTGLIT 626>NP_001268423 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KAQKTGLIT 9 KA+KTGLIT Sbjct: 618 KARKTGLIT 626>XP_005264328 Length = 1261 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KAQKTGLIT 9 KA+KTGLIT Sbjct: 821 KARKTGLIT 829>NP_056386 Length = 1112 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAQKTGLIT 9 K+Q TGL T Sbjct: 264 KSQNTGLTT 272>NP_001035150 Length = 175 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KAQKTG 6 KAQKTG Sbjct: 69 KAQKTG 74>XP_006715520 Length = 1056 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAQKTGLIT 9 K+Q TGL T Sbjct: 208 KSQNTGLTT 216>XP_005247500 Length = 152 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KAQKTG 6 KAQKTG Sbjct: 46 KAQKTG 51>NP_001093879 Length = 1105 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAQKTGLIT 9 K+Q TGL T Sbjct: 257 KSQNTGLTT 265>NP_004780 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AQKTGL 7 AQKTGL Sbjct: 300 AQKTGL 305>NP_005236 Length = 4588 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTGLIT 9 KTGLIT Sbjct: 1192 KTGLIT 1197>NP_001014434 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AQKTGL 7 AQKTGL Sbjct: 292 AQKTGL 297>NP_001008781 Length = 4557 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTGLIT 9 KTGLIT Sbjct: 1201 KTGLIT 1206>XP_006718827 Length = 3479 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTGLIT 9 KTGLIT Sbjct: 91 KTGLIT 96>XP_006717386 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AQKTGL 7 AQKTGL Sbjct: 300 AQKTGL 305>XP_006714202 Length = 4588 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTGLIT 9 KTGLIT Sbjct: 1192 KTGLIT 1197>XP_005262892 Length = 4600 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTGLIT 9 KTGLIT Sbjct: 1192 KTGLIT 1197>XP_005262891 Length = 4600 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTGLIT 9 KTGLIT Sbjct: 1192 KTGLIT 1197>XP_005245407 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AQKTGL 7 AQKTGL Sbjct: 301 AQKTGL 306>XP_006711523 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AQKTGL 7 AQKTGL Sbjct: 310 AQKTGL 315>XP_005245406 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AQKTGL 7 AQKTGL Sbjct: 300 AQKTGL 305>XP_006711522 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AQKTGL 7 AQKTGL Sbjct: 310 AQKTGL 315>NP_064589 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AQKTGL 7 AQKTGL Sbjct: 301 AQKTGL 306>NP_001870 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTGLIT 9 Q+TG+IT Sbjct: 192 QRTGVIT 198>NP_060641 Length = 664 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KTGLIT 9 KTGL+T Sbjct: 289 KTGLVT 294>NP_001238833 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KTGLIT 9 KTGL+T Sbjct: 295 KTGLVT 300>NP_624302 Length = 728 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTGLIT 9 Q+TG+IT Sbjct: 192 QRTGVIT 198>NP_001027019 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTGLIT 9 Q+TG+IT Sbjct: 192 QRTGVIT 198>NP_001238834 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KTGLIT 9 KTGL+T Sbjct: 246 KTGLVT 251>NP_001272369 Length = 1385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAQKTGLIT 9 K +TGL+T Sbjct: 1307 KCHETGLLT 1315>NP_689969 Length = 1708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAQKTGLIT 9 K +TGL+T Sbjct: 1630 KCHETGLLT 1638>NP_001272368 Length = 1732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAQKTGLIT 9 K +TGL+T Sbjct: 1654 KCHETGLLT 1662>NP_001192210 Length = 137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTGLIT 9 QK+G+IT Sbjct: 123 QKSGIIT 129>XP_005276585 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KAQKTGLI 8 KAQ+ GL+ Sbjct: 122 KAQRVGLL 129>XP_370934 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KAQKTGLI 8 KAQ+ GL+ Sbjct: 122 KAQRVGLL 129>XP_006719535 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KTGLIT 9 KTGL+T Sbjct: 295 KTGLVT 300>XP_005269058 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KTGLIT 9 KTGL+T Sbjct: 276 KTGLVT 281>XP_005248335 Length = 1423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAQKTGLIT 9 K +TGL+T Sbjct: 1345 KCHETGLLT 1353>XP_006714526 Length = 1670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAQKTGLIT 9 K +TGL+T Sbjct: 1592 KCHETGLLT 1600>XP_006713764 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTGLIT 9 Q+TG+IT Sbjct: 166 QRTGVIT 172>XP_006713763 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTGLIT 9 Q+TG+IT Sbjct: 166 QRTGVIT 172>XP_001716413 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KAQKTGLI 8 KAQ+ GL+ Sbjct: 122 KAQRVGLL 129>NP_006230 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AQKTGLIT 9 A K GLIT Sbjct: 582 ADKVGLIT 589Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.123 0.307 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 443,043 Number of extensions: 675 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |