Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1135 XP_006716142 18 1135 XP_005250088 18 1135 XP_006716141 18 1135 XP_005250085 18 1135 XP_006716140 18 1135 XP_005250084 18 1135 XP_005250083 18 1135 XP_005250082 18 1135 NP_008877 17 4312 XP_005274250 17 4312 XP_006718734 17 4312 XP_006718733 17 4312 XP_005274249 17 4312 XP_006718732 17 4312 NP_039268 16 5631 XP_005275579 16 5631 XP_005275418 16 5631 XP_005275282 16 5631 XP_005275143 16 5631 XP_005274986 16 5631 XP_005272840 16 5631 XP_005249031 16 5631 NP_003473 16 7355 NP_003622 16 7355 XP_006719679 16 7355 XP_005269219 16 7355 XP_006719678 16 7355 XP_006719677 16 7355 NP_004482 16 7355 NP_036342 15 9605 NP_001093149 15 9605 NP_000433 15 9605 NP_001269852 15 9605 NP_060260 15 9605 NP_001263190 15 9605 NP_652759 15 9605 NP_570613 15 9605 NP_777586 15 9605 NP_001185599 15 9605 NP_001103132 15 9605 NP_001012999 15 9605 XP_005276940 15 9605 XP_005276939 15 9605 XP_005276938 15 9605 XP_005276937 15 9605 XP_006722008 15 9605 XP_006722007 15 9605 XP_006717286 15 9605 XP_006717285 15 9605 XP_006717284 15 9605 XP_006717283 15 9605 XP_006717282 15 9605 XP_005251870 15 9605 XP_006716766 15 9605 XP_005251170 15 9605 XP_006716765 15 9605 XP_006716764 15 9605 XP_006716763 15 9605 XP_005251168 15 9605>NP_733751 Length = 4911 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KAQCMFLR 8 KAQCMF + Sbjct: 4490 KAQCMFFK 4497>XP_006716142 Length = 4927 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KAQCMFLR 8 KAQCMF + Sbjct: 4506 KAQCMFFK 4513>XP_005250088 Length = 4928 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KAQCMFLR 8 KAQCMF + Sbjct: 4507 KAQCMFFK 4514>XP_006716141 Length = 4959 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KAQCMFLR 8 KAQCMF + Sbjct: 4538 KAQCMFFK 4545>XP_005250085 Length = 4979 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KAQCMFLR 8 KAQCMF + Sbjct: 4562 KAQCMFFK 4569>XP_006716140 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KAQCMFLR 8 KAQCMF + Sbjct: 4561 KAQCMFFK 4568>XP_005250084 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KAQCMFLR 8 KAQCMF + Sbjct: 4561 KAQCMFFK 4568>XP_005250083 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KAQCMFLR 8 KAQCMF + Sbjct: 4561 KAQCMFFK 4568>XP_005250082 Length = 4983 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KAQCMFLR 8 KAQCMF + Sbjct: 4562 KAQCMFFK 4569>NP_008877 Length = 2390 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QCMFLR 8 QC+FLR Sbjct: 1139 QCLFLR 1144>XP_005274250 Length = 2390 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QCMFLR 8 QC+FLR Sbjct: 1139 QCLFLR 1144>XP_006718734 Length = 2390 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QCMFLR 8 QC+FLR Sbjct: 1139 QCLFLR 1144>XP_006718733 Length = 2390 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QCMFLR 8 QC+FLR Sbjct: 1139 QCLFLR 1144>XP_005274249 Length = 2390 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QCMFLR 8 QC+FLR Sbjct: 1139 QCLFLR 1144>XP_006718732 Length = 2397 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QCMFLR 8 QC+FLR Sbjct: 1146 QCLFLR 1151>NP_039268 Length = 285 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A C+FLR Sbjct: 218 ADCLFLR 224>XP_005275579 Length = 285 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A C+FLR Sbjct: 218 ADCLFLR 224>XP_005275418 Length = 285 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A C+FLR Sbjct: 218 ADCLFLR 224>XP_005275282 Length = 285 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A C+FLR Sbjct: 218 ADCLFLR 224>XP_005275143 Length = 285 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A C+FLR Sbjct: 218 ADCLFLR 224>XP_005274986 Length = 285 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A C+FLR Sbjct: 218 ADCLFLR 224>XP_005272840 Length = 285 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A C+FLR Sbjct: 218 ADCLFLR 224>XP_005249031 Length = 285 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A C+FLR Sbjct: 218 ADCLFLR 224>NP_003473 Length = 5537 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAQCMFLR 8 +A+CMF + Sbjct: 5120 RAKCMFFK 5127>NP_003622 Length = 976 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KAQCMFLR 8 KA C FLR Sbjct: 847 KAYCGFLR 854>XP_006719679 Length = 5536 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAQCMFLR 8 +A+CMF + Sbjct: 5119 RAKCMFFK 5126>XP_005269219 Length = 5537 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAQCMFLR 8 +A+CMF + Sbjct: 5120 RAKCMFFK 5127>XP_006719678 Length = 5539 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAQCMFLR 8 +A+CMF + Sbjct: 5122 RAKCMFFK 5129>XP_006719677 Length = 5540 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAQCMFLR 8 +A+CMF + Sbjct: 5123 RAKCMFFK 5130>NP_004482 Length = 1499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAQCMFL 7 K QC+FL Sbjct: 727 KLQCVFL 733>NP_036342 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 QCMFLR 8 QC+FL+ Sbjct: 354 QCLFLK 359>NP_001093149 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 QCMFLR 8 QC+FL+ Sbjct: 354 QCLFLK 359>NP_000433 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A+C FLR Sbjct: 620 AKCYFLR 626>NP_001269852 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KAQCMF 6 KA+C+F Sbjct: 529 KAECLF 534>NP_060260 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KAQCMF 6 KA+C+F Sbjct: 527 KAECLF 532>NP_001263190 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KAQCMF 6 KA+C+F Sbjct: 358 KAECLF 363>NP_652759 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KAQCMF 6 KA+C+F Sbjct: 639 KAECLF 644>NP_570613 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KAQCMF 6 KA+C+F Sbjct: 358 KAECLF 363>NP_777586 Length = 148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 QCMFLR 8 QC FLR Sbjct: 3 QCCFLR 8>NP_001185599 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 QCMFLR 8 QC FLR Sbjct: 3 QCCFLR 8>NP_001103132 Length = 4284 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AQCMFLR 8 A+C++LR Sbjct: 946 ARCLYLR 952>NP_001012999 Length = 967 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QCMFLRT 9 +C FLRT Sbjct: 383 ECGFLRT 389Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QCMFLRT 9 +C FLRT Sbjct: 540 ECGFLRT 546>XP_005276940 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A+C FLR Sbjct: 620 AKCYFLR 626>XP_005276939 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A+C FLR Sbjct: 620 AKCYFLR 626>XP_005276938 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A+C FLR Sbjct: 620 AKCYFLR 626>XP_005276937 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A+C FLR Sbjct: 620 AKCYFLR 626>XP_006722008 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A+C FLR Sbjct: 620 AKCYFLR 626>XP_006722007 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AQCMFLR 8 A+C FLR Sbjct: 620 AKCYFLR 626>XP_006717286 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KAQCMF 6 KA+C+F Sbjct: 535 KAECLF 540>XP_006717285 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KAQCMF 6 KA+C+F Sbjct: 265 KAECLF 270>XP_006717284 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KAQCMF 6 KA+C+F Sbjct: 402 KAECLF 407>XP_006717283 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KAQCMF 6 KA+C+F Sbjct: 527 KAECLF 532>XP_006717282 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KAQCMF 6 KA+C+F Sbjct: 535 KAECLF 540>XP_005251870 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 QCMFLR 8 QC+FL+ Sbjct: 354 QCLFLK 359>XP_006716766 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAQCMFL 7 KA C+FL Sbjct: 488 KATCVFL 494>XP_005251170 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAQCMFL 7 KA C+FL Sbjct: 505 KATCVFL 511>XP_006716765 Length = 851 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAQCMFL 7 KA C+FL Sbjct: 553 KATCVFL 559>XP_006716764 Length = 864 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAQCMFL 7 KA C+FL Sbjct: 566 KATCVFL 572>XP_006716763 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAQCMFL 7 KA C+FL Sbjct: 569 KATCVFL 575>XP_005251168 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAQCMFL 7 KA C+FL Sbjct: 570 KATCVFL 576Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.346 0.136 0.452 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 506,250 Number of extensions: 568 Number of successful extensions: 61 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |