Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 20 390 NP_653080 20 390 XP_005267292 20 390 XP_005267291 20 390 XP_005267290 20 390 NP_112190 18 1935 NP_001787 17 2528 XP_005255817 17 2528 XP_005255816 17 2528 NP_001135419 17 3301 NP_001012524 17 3301 XP_005265142 17 3301 XP_005265141 17 3301 XP_005265140 17 3301 XP_006713178 17 3301 XP_005265139 17 3301 XP_005265138 17 3301 NP_003992 17 4312 NP_001002274 17 4312 NP_001002275 17 4312 NP_001177757 17 4312 NP_001002273 17 4312 NP_067674 17 4312 NP_001129691 17 4312 NP_056306 17 4312 NP_689585 17 4312 NP_116259 17 4312 NP_963857 17 4312 XP_006715515 17 4312 XP_006715514 17 4312 XP_006715513 17 4312 XP_005266974 17 4312 XP_005266973 17 4312 XP_005266972 17 4312 XP_005266971 17 4312 XP_005266970 17 4312 XP_005266969 17 4312 XP_005245017 17 4312 NP_004398 16 5631 NP_001073380 16 5631 NP_001171569 16 7355 NP_001761 16 7355 NP_596870 16 7355 NP_001254505 16 7355 NP_694942 16 7355 XP_005255753 16 7355 XP_006721167 16 7355 XP_006721166 16 7355 XP_005248930 16 7355 NP_957716 15 9605 NP_957719 15 9605 NP_061004 15 9605 NP_003863 15 9605 NP_958436 15 9605 NP_957718 15 9605 NP_002421 15 9605 NP_057363 15 9605 XP_005246991 15 9605 XP_005246990 15 9605 NP_001099047 15 9605>NP_005091 Length = 1782 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KANSQDAGQ 9 KA+SQDAGQ Sbjct: 1584 KADSQDAGQ 1592>NP_653080 Length = 1684 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KANSQDAGQ 9 KA+SQDAGQ Sbjct: 1486 KADSQDAGQ 1494>XP_005267292 Length = 1677 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KANSQDAGQ 9 KA+SQDAGQ Sbjct: 1479 KADSQDAGQ 1487>XP_005267291 Length = 1684 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KANSQDAGQ 9 KA+SQDAGQ Sbjct: 1486 KADSQDAGQ 1494>XP_005267290 Length = 1782 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KANSQDAGQ 9 KA+SQDAGQ Sbjct: 1584 KADSQDAGQ 1592>NP_112190 Length = 546 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KANSQDAGQ 9 KA++QDAG+ Sbjct: 141 KASAQDAGE 149>NP_001787 Length = 799 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KANSQDAGQ 9 KAN QD G+ Sbjct: 299 KANDQDIGE 307>XP_005255817 Length = 711 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KANSQDAGQ 9 KAN QD G+ Sbjct: 299 KANDQDIGE 307>XP_005255816 Length = 799 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KANSQDAGQ 9 KAN QD G+ Sbjct: 299 KANDQDIGE 307>NP_001135419 Length = 948 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NSQDAGQ 9 NSQD GQ Sbjct: 876 NSQDCGQ 882>NP_001012524 Length = 914 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NSQDAGQ 9 NSQD GQ Sbjct: 842 NSQDCGQ 848>XP_005265142 Length = 590 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NSQDAGQ 9 NSQD GQ Sbjct: 518 NSQDCGQ 524>XP_005265141 Length = 655 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NSQDAGQ 9 NSQD GQ Sbjct: 583 NSQDCGQ 589>XP_005265140 Length = 911 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NSQDAGQ 9 NSQD GQ Sbjct: 839 NSQDCGQ 845>XP_006713178 Length = 944 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NSQDAGQ 9 NSQD GQ Sbjct: 872 NSQDCGQ 878>XP_005265139 Length = 947 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NSQDAGQ 9 NSQD GQ Sbjct: 875 NSQDCGQ 881>XP_005265138 Length = 954 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NSQDAGQ 9 NSQD GQ Sbjct: 882 NSQDCGQ 888>NP_003992 Length = 310 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 KAN+ D+G+ Sbjct: 102 KANNNDSGE 110>NP_001002274 Length = 291 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 KAN+ D+G+ Sbjct: 102 KANNNDSGE 110>NP_001002275 Length = 309 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 KAN+ D+G+ Sbjct: 101 KANNNDSGE 109>NP_001177757 Length = 303 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 KAN+ D+G+ Sbjct: 95 KANNNDSGE 103>NP_001002273 Length = 290 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 KAN+ D+G+ Sbjct: 101 KANNNDSGE 109>NP_067674 Length = 316 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 KAN+ D+G+ Sbjct: 92 KANNNDSGE 100>NP_001129691 Length = 317 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 KAN+ D+G+ Sbjct: 93 KANNNDSGE 101>NP_056306 Length = 805 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ANSQDAGQ 9 +NSQD+G+ Sbjct: 126 SNSQDSGE 133>NP_689585 Length = 1437 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 K NS+D+G+ Sbjct: 1396 KVNSEDSGR 1404>NP_116259 Length = 805 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ANSQDAGQ 9 +NSQD+G+ Sbjct: 126 SNSQDSGE 133>NP_963857 Length = 323 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 KAN+ D+G+ Sbjct: 102 KANNNDSGE 110>XP_006715515 Length = 719 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ANSQDAGQ 9 +NSQD+G+ Sbjct: 31 SNSQDSGE 38>XP_006715514 Length = 719 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ANSQDAGQ 9 +NSQD+G+ Sbjct: 31 SNSQDSGE 38>XP_006715513 Length = 719 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ANSQDAGQ 9 +NSQD+G+ Sbjct: 31 SNSQDSGE 38>XP_005266974 Length = 814 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ANSQDAGQ 9 +NSQD+G+ Sbjct: 126 SNSQDSGE 133>XP_005266973 Length = 814 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ANSQDAGQ 9 +NSQD+G+ Sbjct: 126 SNSQDSGE 133>XP_005266972 Length = 814 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ANSQDAGQ 9 +NSQD+G+ Sbjct: 126 SNSQDSGE 133>XP_005266971 Length = 859 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ANSQDAGQ 9 +NSQD+G+ Sbjct: 189 SNSQDSGE 196>XP_005266970 Length = 868 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ANSQDAGQ 9 +NSQD+G+ Sbjct: 189 SNSQDSGE 196>XP_005266969 Length = 877 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ANSQDAGQ 9 +NSQD+G+ Sbjct: 189 SNSQDSGE 196>XP_005245017 Length = 276 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 KAN+ D+G+ Sbjct: 93 KANNNDSGE 101>NP_004398 Length = 513 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KANSQDAG 8 +AN+QD+G Sbjct: 248 QANTQDSG 255>NP_001073380 Length = 497 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KANSQDAG 8 +AN+QD+G Sbjct: 232 QANTQDSG 239>NP_001171569 Length = 557 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 +A +QDAG+ Sbjct: 250 RATAQDAGK 258>NP_001761 Length = 556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 +A +QDAG+ Sbjct: 250 RATAQDAGK 258>NP_596870 Length = 5604 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSQDAGQ 9 NSQD+G+ Sbjct: 4222 NSQDSGK 4228>NP_001254505 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ANSQDAGQ 9 ANS+D G+ Sbjct: 869 ANSEDGGR 876>NP_694942 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ANSQDAGQ 9 ANS+D G+ Sbjct: 874 ANSEDGGR 881>XP_005255753 Length = 282 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 +A +QDAG+ Sbjct: 250 RATAQDAGK 258>XP_006721167 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 +A +QDAG+ Sbjct: 250 RATAQDAGK 258>XP_006721166 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 +A +QDAG+ Sbjct: 161 RATAQDAGK 169>XP_005248930 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ANSQDAGQ 9 AN+QD G+ Sbjct: 342 ANNQDGGK 349>NP_957716 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KANSQDAG 8 + NS+DAG Sbjct: 31 RLNSKDAG 38>NP_957719 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KANSQDAG 8 + NS+DAG Sbjct: 31 RLNSKDAG 38>NP_061004 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KANSQDAG 8 + NS+DAG Sbjct: 31 RLNSKDAG 38>NP_003863 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KANSQDAG 8 + NS+DAG Sbjct: 31 RLNSKDAG 38>NP_958436 Length = 909 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KANSQDAG 8 + NS+DAG Sbjct: 31 RLNSKDAG 38>NP_957718 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KANSQDAG 8 + NS+DAG Sbjct: 31 RLNSKDAG 38>NP_002421 Length = 1320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KANSQDAGQ 9 + NS++AGQ Sbjct: 10 QVNSRNAGQ 18>NP_057363 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KANSQDAGQ 9 KAN D G+ Sbjct: 291 KANDPDVGE 299>XP_005246991 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KANSQDAG 8 + NS+DAG Sbjct: 31 RLNSKDAG 38>XP_005246990 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KANSQDAG 8 + NS+DAG Sbjct: 31 RLNSKDAG 38>NP_001099047 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KANSQDAGQ 9 K NS D G+ Sbjct: 5 KVNSMDLGE 13Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.288 0.104 0.259 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 557,383 Number of extensions: 853 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |