Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1135 XP_006716142 18 1135 XP_005250088 18 1135 XP_006716141 18 1135 XP_005250085 18 1135 XP_006716140 18 1135 XP_005250084 18 1135 XP_005250083 18 1135 XP_005250082 18 1135 NP_003473 17 4312 XP_006719679 17 4312 XP_005269219 17 4312 XP_006719678 17 4312 XP_006719677 17 4312 XP_005276260 16 5631 XP_005264734 16 5631 XP_005275976 16 5631 NP_597719 16 7355 XP_006713569 16 7355 NP_001071159 15 9605 NP_079016 15 9605 NP_443182 15 9605 NP_659429 15 9605 NP_001274730 15 9605 XP_006722222 15 9605 XP_006722221 15 9605 XP_006722220 15 9605 XP_006722219 15 9605 XP_006722218 15 9605 XP_006722217 15 9605 XP_006722216 15 9605 XP_006722215 15 9605 XP_006722214 15 9605 XP_006719827 15 9605 XP_006718976 15 9605 XP_005277780 15 9605 XP_006712420 15 9605 XP_006712419 15 9605 XP_005263954 15 9605 NP_055053 15 9605>NP_733751 Length = 4911 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KALSAKQHT 9 KALSAKQ T Sbjct: 3210 KALSAKQRT 3218>XP_006716142 Length = 4927 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KALSAKQHT 9 KALSAKQ T Sbjct: 3227 KALSAKQRT 3235>XP_005250088 Length = 4928 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KALSAKQHT 9 KALSAKQ T Sbjct: 3227 KALSAKQRT 3235>XP_006716141 Length = 4959 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KALSAKQHT 9 KALSAKQ T Sbjct: 3227 KALSAKQRT 3235>XP_005250085 Length = 4979 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KALSAKQHT 9 KALSAKQ T Sbjct: 3227 KALSAKQRT 3235>XP_006716140 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KALSAKQHT 9 KALSAKQ T Sbjct: 3227 KALSAKQRT 3235>XP_005250084 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KALSAKQHT 9 KALSAKQ T Sbjct: 3227 KALSAKQRT 3235>XP_005250083 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KALSAKQHT 9 KALSAKQ T Sbjct: 3226 KALSAKQRT 3234>XP_005250082 Length = 4983 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KALSAKQHT 9 KALSAKQ T Sbjct: 3227 KALSAKQRT 3235>NP_003473 Length = 5537 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KALSAKQHT 9 KAL AKQ T Sbjct: 3540 KALCAKQRT 3548>XP_006719679 Length = 5536 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KALSAKQHT 9 KAL AKQ T Sbjct: 3539 KALCAKQRT 3547>XP_005269219 Length = 5537 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KALSAKQHT 9 KAL AKQ T Sbjct: 3540 KALCAKQRT 3548>XP_006719678 Length = 5539 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KALSAKQHT 9 KAL AKQ T Sbjct: 3542 KALCAKQRT 3550>XP_006719677 Length = 5540 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KALSAKQHT 9 KAL AKQ T Sbjct: 3543 KALCAKQRT 3551>XP_005276260 Length = 160 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALSAKQH 8 ALSA+QH Sbjct: 34 ALSAQQH 40>XP_005264734 Length = 160 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALSAKQH 8 ALSA+QH Sbjct: 34 ALSAQQH 40>XP_005275976 Length = 160 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALSAKQH 8 ALSA+QH Sbjct: 34 ALSAQQH 40>NP_597719 Length = 770 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALSAKQHT 9 ALS+K+H+ Sbjct: 731 ALSSKEHS 738>XP_006713569 Length = 341 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALSAKQHT 9 ALS+K+H+ Sbjct: 302 ALSSKEHS 309>NP_001071159 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALSAKQHT 9 ALSA QH+ Sbjct: 215 ALSALQHS 222>NP_079016 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALSAKQHT 9 ALSA QH+ Sbjct: 386 ALSALQHS 393>NP_443182 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KALSAKQHT 9 +ALS QHT Sbjct: 246 QALSYAQHT 254>NP_659429 Length = 1294 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KALSAKQHT 9 K LSAK H+ Sbjct: 282 KDLSAKTHS 290>NP_001274730 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LSAKQHT 9 +SAK HT Sbjct: 257 ISAKDHT 263>XP_006722222 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KALSAKQH 8 KAL+ K+H Sbjct: 92 KALTKKEH 99>XP_006722221 Length = 791 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KALSAKQH 8 KAL+ K+H Sbjct: 291 KALTKKEH 298>XP_006722220 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KALSAKQH 8 KAL+ K+H Sbjct: 309 KALTKKEH 316>XP_006722219 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KALSAKQH 8 KAL+ K+H Sbjct: 428 KALTKKEH 435>XP_006722218 Length = 877 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KALSAKQH 8 KAL+ K+H Sbjct: 428 KALTKKEH 435>XP_006722217 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KALSAKQH 8 KAL+ K+H Sbjct: 428 KALTKKEH 435>XP_006722216 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KALSAKQH 8 KAL+ K+H Sbjct: 428 KALTKKEH 435>XP_006722215 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KALSAKQH 8 KAL+ K+H Sbjct: 428 KALTKKEH 435>XP_006722214 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KALSAKQH 8 KAL+ K+H Sbjct: 428 KALTKKEH 435>XP_006719827 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KALSAKQHT 9 +ALS QHT Sbjct: 246 QALSYAQHT 254>XP_006718976 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALSAKQHT 9 ALSA QH+ Sbjct: 386 ALSALQHS 393>XP_005277780 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALSAKQHT 9 ALSA QH+ Sbjct: 386 ALSALQHS 393>XP_006712420 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KALSAKQHT 9 K LSAK H+ Sbjct: 132 KDLSAKTHS 140>XP_006712419 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KALSAKQHT 9 K LSAK H+ Sbjct: 282 KDLSAKTHS 290>XP_005263954 Length = 1312 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KALSAKQHT 9 K LSAK H+ Sbjct: 282 KDLSAKTHS 290>NP_055053 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KALSAKQH 8 KAL+ K+H Sbjct: 291 KALTKKEH 298Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.104 0.260 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 409,688 Number of extensions: 366 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |