Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001245210                                                           20     299
NP_000242                                                              20     299
XP_005264389                                                           20     299
NP_004421                                                              18    1935
XP_006718859                                                           17    3301
XP_005277737                                                           17    3301
NP_001121616                                                           16    5631
NP_219480                                                              16    5631
NP_001029344                                                           16    5631
NP_003898                                                              16    5631
NP_065799                                                              16    7355
NP_001129633                                                           16    7355
NP_775789                                                              16    7355
NP_064710                                                              16    7355
XP_005257594                                                           16    7355
XP_006722050                                                           16    7355
XP_005255493                                                           16    7355
XP_006721128                                                           16    7355
XP_005255492                                                           16    7355
XP_006716494                                                           16    7355
XP_005251231                                                           16    7355
XP_006716493                                                           16    7355
XP_006716492                                                           16    7355
XP_006716491                                                           16    7355
XP_006716490                                                           16    7355
XP_006710602                                                           16    7355
XP_006710601                                                           16    7355
XP_006710598                                                           16    7355
XP_006710597                                                           16    7355
XP_006710596                                                           16    7355
XP_006710595                                                           16    7355
XP_006710594                                                           16    7355
XP_006710593                                                           16    7355
XP_006710592                                                           16    7355
XP_006710591                                                           16    7355
XP_006710590                                                           16    7355
XP_006710589                                                           16    7355
XP_006710588                                                           16    7355
XP_006710587                                                           16    7355
XP_006710586                                                           16    7355
XP_006710585                                                           16    7355
XP_005270755                                                           16    7355
XP_006710584                                                           16    7355
XP_005270754                                                           16    7355
XP_005270753                                                           16    7355
XP_006710583                                                           16    7355
XP_005270752                                                           16    7355
XP_006710582                                                           16    7355
XP_005270751                                                           16    7355
NP_001129632                                                           16    7355
NP_001185924                                                           15    9605
NP_775489                                                              15    9605
NP_001185923                                                           15    9605
NP_075394                                                              15    9605
NP_001185922                                                           15    9605
NP_620055                                                              15    9605
NP_060214                                                              15    9605
NP_001166203                                                           15    9605
NP_068557                                                              15    9605
NP_620056                                                              15    9605
NP_001166210                                                           15    9605
NP_056049                                                              15    9605
NP_001275677                                                           15    9605
NP_620057                                                              15    9605
NP_001091988                                                           15    9605
NP_001166214                                                           15    9605
NP_068708                                                              15    9605
NP_878907                                                              15    9605
XP_006724523                                                           15    9605
XP_006724522                                                           15    9605
XP_005268699                                                           15    9605
XP_005273981                                                           15    9605
XP_005248952                                                           15    9605
XP_005248951                                                           15    9605
XP_005248950                                                           15    9605
XP_005248949                                                           15    9605
XP_006710902                                                           15    9605
XP_006710901                                                           15    9605
XP_006710900                                                           15    9605
XP_005244835                                                           15    9605
XP_005271027                                                           15    9605
XP_005271023                                                           15    9605
XP_006710772                                                           15    9605
XP_005271021                                                           15    9605
XP_005271020                                                           15    9605
XP_006710771                                                           15    9605
NP_060882                                                              15    9605
>NP_001245210
          Length = 868

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   KALNLFQGS 9
           +ALNLFQGS
Sbjct: 242 RALNLFQGS 250
>NP_000242
          Length = 934

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   KALNLFQGS 9
           +ALNLFQGS
Sbjct: 308 RALNLFQGS 316
>XP_005264389
          Length = 921

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   KALNLFQGS 9
           +ALNLFQGS
Sbjct: 308 RALNLFQGS 316
>NP_004421
          Length = 387

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2  ALNLFQGS 9
          ALNLF GS
Sbjct: 32 ALNLFSGS 39
>XP_006718859
          Length = 1539

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   KALNLFQGS 9
           KAL LF GS
Sbjct: 970 KALGLFPGS 978
>XP_005277737
          Length = 1585

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    KALNLFQGS 9
            KAL LF GS
Sbjct: 1016 KALGLFPGS 1024
>NP_001121616
          Length = 770

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   LNLFQGS 9
           LNLF GS
Sbjct: 618 LNLFNGS 624
>NP_219480
          Length = 297

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KALNLFQGS 9
           K +NLF+G+
Sbjct: 264 KLINLFRGA 272
>NP_001029344
          Length = 307

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KALNLFQGS 9
           K +NLF+G+
Sbjct: 274 KLINLFRGA 282
>NP_003898
          Length = 721

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   LNLFQGS 9
           L+LFQGS
Sbjct: 228 LSLFQGS 234
>NP_065799
          Length = 1204

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   LNLFQG 8
           LN+FQG
Sbjct: 625 LNIFQG 630
>NP_001129633
          Length = 590

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   KALNLFQG 8
           KAL  FQG
Sbjct: 212 KALRAFQG 219
>NP_775789
          Length = 681

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   KALNLFQG 8
           KAL  FQG
Sbjct: 212 KALRAFQG 219
>NP_064710
          Length = 1052

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   ALNLFQGS 9
           ++NLF GS
Sbjct: 224 SINLFMGS 231
>XP_005257594
          Length = 1166

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   LNLFQG 8
           LN+FQG
Sbjct: 587 LNIFQG 592
>XP_006722050
          Length = 1196

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   LNLFQG 8
           LN+FQG
Sbjct: 617 LNIFQG 622
>XP_005255493
          Length = 959

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   ALNLFQGS 9
           ++NLF GS
Sbjct: 224 SINLFMGS 231
>XP_006721128
          Length = 985

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   ALNLFQGS 9
           ++NLF GS
Sbjct: 224 SINLFMGS 231
>XP_005255492
          Length = 1026

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   ALNLFQGS 9
           ++NLF GS
Sbjct: 224 SINLFMGS 231
>XP_006716494
          Length = 598

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   KALNLFQG 8
           KAL  FQG
Sbjct: 212 KALRAFQG 219
>XP_005251231
          Length = 618

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   KALNLFQG 8
           KAL  FQG
Sbjct: 149 KALRAFQG 156
>XP_006716493
          Length = 628

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   KALNLFQG 8
           KAL  FQG
Sbjct: 212 KALRAFQG 219
>XP_006716492
          Length = 654

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   KALNLFQG 8
           KAL  FQG
Sbjct: 212 KALRAFQG 219
>XP_006716491
          Length = 661

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   KALNLFQG 8
           KAL  FQG
Sbjct: 192 KALRAFQG 199
>XP_006716490
          Length = 663

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   KALNLFQG 8
           KAL  FQG
Sbjct: 194 KALRAFQG 201
>XP_006710602
          Length = 7391

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2334 LNMFQG 2339
>XP_006710601
          Length = 4720

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2494 LNMFQG 2499
>XP_006710598
          Length = 7553

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2324 LNMFQG 2329
>XP_006710597
          Length = 7451

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2334 LNMFQG 2339
>XP_006710596
          Length = 7512

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2283 LNMFQG 2288
>XP_006710595
          Length = 7526

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2297 LNMFQG 2302
>XP_006710594
          Length = 7528

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2299 LNMFQG 2304
>XP_006710593
          Length = 7539

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2310 LNMFQG 2315
>XP_006710592
          Length = 7544

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2315 LNMFQG 2320
>XP_006710591
          Length = 7558

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2329 LNMFQG 2334
>XP_006710590
          Length = 7563

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2334 LNMFQG 2339
>XP_006710589
          Length = 7595

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2366 LNMFQG 2371
>XP_006710588
          Length = 7614

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2494 LNMFQG 2499
>XP_006710587
          Length = 7645

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2494 LNMFQG 2499
>XP_006710586
          Length = 7645

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2494 LNMFQG 2499
>XP_006710585
          Length = 7657

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2494 LNMFQG 2499
>XP_005270755
          Length = 7663

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2494 LNMFQG 2499
>XP_006710584
          Length = 7686

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2494 LNMFQG 2499
>XP_005270754
          Length = 7694

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2494 LNMFQG 2499
>XP_005270753
          Length = 7700

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2494 LNMFQG 2499
>XP_006710583
          Length = 7702

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2494 LNMFQG 2499
>XP_005270752
          Length = 7717

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2494 LNMFQG 2499
>XP_006710582
          Length = 7720

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2494 LNMFQG 2499
>XP_005270751
          Length = 7723

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 2494 LNMFQG 2499
>NP_001129632
          Length = 632

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   KALNLFQG 8
           KAL  FQG
Sbjct: 212 KALRAFQG 219
>NP_001185924
          Length = 414

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   ALNLFQGS 9
           A +LFQGS
Sbjct: 158 ASSLFQGS 165
>NP_775489
          Length = 490

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  KALNLFQ 7
          KAL LFQ
Sbjct: 79 KALRLFQ 85
>NP_001185923
          Length = 591

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   ALNLFQGS 9
           A +LFQGS
Sbjct: 335 ASSLFQGS 342
>NP_075394
          Length = 446

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   ALNLFQGS 9
           A +LFQGS
Sbjct: 190 ASSLFQGS 197
>NP_001185922
          Length = 446

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   ALNLFQGS 9
           A +LFQGS
Sbjct: 190 ASSLFQGS 197
>NP_620055
          Length = 558

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   LNLFQGS 9
           LNLF+G+
Sbjct: 142 LNLFRGA 148
>NP_060214
          Length = 575

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   LNLFQGS 9
           LNLF+G+
Sbjct: 159 LNLFRGA 165
>NP_001166203
          Length = 480

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NLFQGS 9
           NLFQG+
Sbjct: 104 NLFQGA 109
>NP_068557
          Length = 530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NLFQGS 9
           NLFQG+
Sbjct: 154 NLFQGA 159
>NP_620056
          Length = 544

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   LNLFQGS 9
           LNLF+G+
Sbjct: 159 LNLFRGA 165
>NP_001166210
          Length = 530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NLFQGS 9
           NLFQG+
Sbjct: 154 NLFQGA 159
>NP_056049
          Length = 1346

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 1254 LNVFQG 1259
>NP_001275677
          Length = 604

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   KALNLFQGS 9
           +A++LF+GS
Sbjct: 206 EAVSLFRGS 214
>NP_620057
          Length = 555

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   LNLFQGS 9
           LNLF+G+
Sbjct: 159 LNLFRGA 165
>NP_001091988
          Length = 1346

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 1254 LNVFQG 1259
>NP_001166214
          Length = 530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NLFQGS 9
           NLFQG+
Sbjct: 154 NLFQGA 159
>NP_068708
          Length = 585

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   LNLFQGS 9
           LNLF+G+
Sbjct: 140 LNLFRGA 146
>NP_878907
          Length = 544

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   KALNLFQGS 9
           +A++LF+GS
Sbjct: 206 EAVSLFRGS 214
>XP_006724523
          Length = 530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NLFQGS 9
           NLFQG+
Sbjct: 154 NLFQGA 159
>XP_006724522
          Length = 530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NLFQGS 9
           NLFQG+
Sbjct: 154 NLFQGA 159
>XP_005268699
          Length = 496

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  KALNLFQ 7
          KAL LFQ
Sbjct: 85 KALRLFQ 91
>XP_005273981
          Length = 400

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   KALNLFQGS 9
           +A++LF+GS
Sbjct: 206 EAVSLFRGS 214
>XP_005248952
          Length = 1380

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 1294 LNVFQG 1299
>XP_005248951
          Length = 1381

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 1294 LNVFQG 1299
>XP_005248950
          Length = 1386

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 1294 LNVFQG 1299
>XP_005248949
          Length = 1386

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    LNLFQG 8
            LN+FQG
Sbjct: 1294 LNVFQG 1299
>XP_006710902
          Length = 550

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   ALNLFQGS 9
           A +LFQGS
Sbjct: 294 ASSLFQGS 301
>XP_006710901
          Length = 359

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   ALNLFQGS 9
           A +LFQGS
Sbjct: 103 ASSLFQGS 110
>XP_006710900
          Length = 446

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   ALNLFQGS 9
           A +LFQGS
Sbjct: 190 ASSLFQGS 197
>XP_005244835
          Length = 446

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   ALNLFQGS 9
           A +LFQGS
Sbjct: 190 ASSLFQGS 197
>XP_005271027
          Length = 319

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   LNLFQGS 9
           LNLF+G+
Sbjct: 159 LNLFRGA 165
>XP_005271023
          Length = 418

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   LNLFQGS 9
           LNLF+G+
Sbjct: 159 LNLFRGA 165
>XP_006710772
          Length = 447

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   LNLFQGS 9
           LNLF+G+
Sbjct: 159 LNLFRGA 165
>XP_005271021
          Length = 453

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  LNLFQGS 9
          LNLF+G+
Sbjct: 37 LNLFRGA 43
>XP_005271020
          Length = 453

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  LNLFQGS 9
          LNLF+G+
Sbjct: 37 LNLFRGA 43
>XP_006710771
          Length = 478

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   LNLFQGS 9
           LNLF+G+
Sbjct: 159 LNLFRGA 165
>NP_060882
          Length = 554

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   LNLFQGS 9
           LNLF+G+
Sbjct: 140 LNLFRGA 146
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.318    0.133    0.356 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 459,785
Number of extensions: 822
Number of successful extensions: 87
Number of sequences better than 10000.0: 87
Number of HSP's gapped: 87
Number of HSP's successfully gapped: 87
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.8 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package