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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000258                                                              18    1482
NP_001035957                                                           18    1482
XP_005276506                                                           18    1482
XP_006721991                                                           18    1482
XP_006721990                                                           18    1482
XP_006721989                                                           18    1482
XP_005258041                                                           18    1482
XP_006721988                                                           18    1482
XP_006721987                                                           18    1482
XP_006721986                                                           18    1482
XP_005258040                                                           18    1482
XP_006721985                                                           18    1482
XP_006720412                                                           18    1482
NP_001189367                                                           15    9605
NP_056423                                                              15    9605
XP_006723772                                                           15    9605
XP_005269745                                                           15    9605
NP_542790                                                              15    9605

>NP_000258
          Length = 2818

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KALKMLSIF 9
            KALK LSIF
Sbjct: 1564 KALKTLSIF 1572



>NP_001035957
          Length = 2839

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KALKMLSIF 9
            KALK LSIF
Sbjct: 1585 KALKTLSIF 1593



>XP_005276506
          Length = 151

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   KALKMLSIF 9
           KALK LSIF
Sbjct: 109 KALKTLSIF 117



>XP_006721991
          Length = 1632

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KALKMLSIF 9
            KALK LSIF
Sbjct: 1595 KALKTLSIF 1603



>XP_006721990
          Length = 2823

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KALKMLSIF 9
            KALK LSIF
Sbjct: 1595 KALKTLSIF 1603



>XP_006721989
          Length = 2823

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KALKMLSIF 9
            KALK LSIF
Sbjct: 1595 KALKTLSIF 1603



>XP_005258041
          Length = 2836

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KALKMLSIF 9
            KALK LSIF
Sbjct: 1564 KALKTLSIF 1572



>XP_006721988
          Length = 2846

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KALKMLSIF 9
            KALK LSIF
Sbjct: 1574 KALKTLSIF 1582



>XP_006721987
          Length = 2849

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KALKMLSIF 9
            KALK LSIF
Sbjct: 1595 KALKTLSIF 1603



>XP_006721986
          Length = 2854

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KALKMLSIF 9
            KALK LSIF
Sbjct: 1582 KALKTLSIF 1590



>XP_005258040
          Length = 2857

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KALKMLSIF 9
            KALK LSIF
Sbjct: 1585 KALKTLSIF 1593



>XP_006721985
          Length = 2867

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KALKMLSIF 9
            KALK LSIF
Sbjct: 1595 KALKTLSIF 1603



>XP_006720412
          Length = 128

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  KALKMLSIF 9
          KALK LSIF
Sbjct: 86 KALKTLSIF 94



>NP_001189367
          Length = 1238

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    KALKMLSIF 9
            + +K+LSIF
Sbjct: 1151 EVMKLLSIF 1159



>NP_056423
          Length = 1204

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    KALKMLSIF 9
            + +K+LSIF
Sbjct: 1117 EVMKLLSIF 1125



>XP_006723772
          Length = 690

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   KMLSIF 9
           KMLSIF
Sbjct: 258 KMLSIF 263



>XP_005269745
          Length = 859

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KALKMLSIF 9
           + +K+LSIF
Sbjct: 772 EVMKLLSIF 780



>NP_542790
          Length = 696

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   KMLSIF 9
           KMLSIF
Sbjct: 264 KMLSIF 269



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.340    0.144    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 232,098
Number of extensions: 201
Number of successful extensions: 18
Number of sequences better than 10000.0: 18
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 18
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.5 bits)
S2: 28 (15.4 bits)