Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 18 1135 NP_001075109 18 1135 NP_001186978 16 5631 NP_602296 16 7355 NP_001275959 16 7355 NP_116178 16 7355 NP_002035 16 7355 NP_612460 16 7355 NP_001001556 16 7355 NP_001275960 16 7355 XP_006720527 16 7355 XP_005254341 16 7355 XP_006720526 16 7355 XP_006720525 16 7355 XP_005254337 16 7355 XP_006720524 16 7355 XP_005254336 16 7355 XP_005253891 16 7355 XP_006719288 16 7355 XP_005253890 16 7355 XP_005253889 16 7355 XP_005253784 16 7355 XP_005253782 16 7355 XP_006719060 16 7355 XP_006719059 16 7355 XP_006719058 16 7355 XP_005253778 16 7355 XP_005253777 16 7355 XP_005251138 16 7355 XP_006717797 15 9605 NP_056005 15 9605>NP_008835 Length = 4128 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KAISLEEIR 9 +AISLEEIR Sbjct: 844 EAISLEEIR 852>NP_001075109 Length = 4097 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KAISLEEIR 9 +AISLEEIR Sbjct: 844 EAISLEEIR 852>NP_001186978 Length = 2715 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KAISLEEIR 9 +A+SLE++R Sbjct: 1285 EAVSLEQLR 1293>NP_602296 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAISLEEIR 9 KA+SLE+ R Sbjct: 135 KALSLEKAR 143>NP_001275959 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 282 ISLEELR 288>NP_116178 Length = 1025 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 +SLEE+R Sbjct: 590 VSLEEVR 596>NP_002035 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 306 ISLEELR 312>NP_612460 Length = 347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 258 ISLEELR 264>NP_001001556 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 295 ISLEELR 301>NP_001275960 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 282 ISLEELR 288>XP_006720527 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 222 ISLEELR 228>XP_005254341 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 262 ISLEELR 268>XP_006720526 Length = 429 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 273 ISLEELR 279>XP_006720525 Length = 438 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 282 ISLEELR 288>XP_005254337 Length = 451 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 295 ISLEELR 301>XP_006720524 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 306 ISLEELR 312>XP_005254336 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 306 ISLEELR 312>XP_005253891 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 179 ISLEELR 185>XP_006719288 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 336 ISLEELR 342>XP_005253890 Length = 449 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 360 ISLEELR 366>XP_005253889 Length = 449 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 ISLEE+R Sbjct: 360 ISLEELR 366>XP_005253784 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAISLEEIR 9 KA+SLE+ R Sbjct: 135 KALSLEKAR 143>XP_005253782 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAISLEEIR 9 KA+SLE+ R Sbjct: 135 KALSLEKAR 143>XP_006719060 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAISLEEIR 9 KA+SLE+ R Sbjct: 135 KALSLEKAR 143>XP_006719059 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAISLEEIR 9 KA+SLE+ R Sbjct: 135 KALSLEKAR 143>XP_006719058 Length = 384 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAISLEEIR 9 KA+SLE+ R Sbjct: 135 KALSLEKAR 143>XP_005253778 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAISLEEIR 9 KA+SLE+ R Sbjct: 135 KALSLEKAR 143>XP_005253777 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAISLEEIR 9 KA+SLE+ R Sbjct: 135 KALSLEKAR 143>XP_005251138 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISLEEIR 9 +SLEE+R Sbjct: 602 VSLEEVR 608>XP_006717797 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAISLEEIR 9 K ISLE+I+ Sbjct: 106 KKISLEDIQ 114>NP_056005 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAISLEEIR 9 K ISLE+I+ Sbjct: 106 KKISLEDIQ 114Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.131 0.294 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 495,289 Number of extensions: 636 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |