Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 18 1135 XP_006717990 18 1135 XP_006717989 18 1135 NP_001036189 17 2528 NP_065854 17 2528 XP_005263210 17 2528 NP_001157588 17 4312 NP_065089 17 4312 NP_001157586 17 4312 NP_001157587 17 4312 NP_116192 17 4312 NP_954863 17 4312 XP_006723894 17 4312 NP_001041629 17 4312 NP_570141 17 4312 NP_001135440 17 4312 NP_001243749 16 5631 NP_001243750 16 5631 NP_008843 16 5631 NP_775821 16 5631 XP_005251455 16 5631 XP_005251456 16 5631 XP_005251454 16 5631 NP_001005162 16 5631 NP_003092 16 7355 NP_001239441 16 7355 NP_002370 16 7355 NP_004382 16 7355 NP_001271426 16 7355 NP_001239440 16 7355 NP_114428 16 7355 NP_700356 16 7355 NP_071442 16 7355 NP_001007564 16 7355 XP_006723098 16 7355 XP_005255680 16 7355 XP_006721020 16 7355 XP_005255679 16 7355 XP_006721019 16 7355 NP_003316 15 9605 NP_000304 15 9605 NP_000383 15 9605 NP_060034 15 9605 NP_954868 15 9605 NP_954869 15 9605 NP_001277153 15 9605 NP_954870 15 9605 NP_031384 15 9605 NP_005888 15 9605 NP_002010 15 9605 NP_001157864 15 9605 NP_001153392 15 9605 NP_001153503 15 9605 NP_001153502 15 9605 NP_003003 15 9605 NP_005754 15 9605 NP_001092286 15 9605 NP_079199 15 9605 NP_149116 15 9605 NP_001138821 15 9605 XP_006719539 15 9605 XP_006718561 15 9605 XP_005253263 15 9605 XP_006717694 15 9605 XP_006717693 15 9605 XP_005267241 15 9605 XP_005247683 15 9605 XP_006710686 15 9605 XP_005270897 15 9605 XP_005270896 15 9605 NP_001139669 15 9605 NP_653176 15 9605>NP_000305 Length = 403 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAGTGVMIC 9 K TGVMIC Sbjct: 128 KGRTGVMIC 136>XP_006717990 Length = 175 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAGTGVMIC 9 K TGVMIC Sbjct: 113 KGRTGVMIC 121>XP_006717989 Length = 388 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAGTGVMIC 9 K TGVMIC Sbjct: 113 KGRTGVMIC 121>NP_001036189 Length = 538 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AGTGVMIC 9 A TG++IC Sbjct: 375 AATGILIC 382>NP_065854 Length = 620 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAGTGVMIC 9 +AG GV +C Sbjct: 591 RAGAGVAVC 599>XP_005263210 Length = 437 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAGTGVMIC 9 +AG GV +C Sbjct: 408 RAGAGVAVC 416>NP_001157588 Length = 786 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 GTG+M C Sbjct: 3 GTGIMDC 9>NP_065089 Length = 786 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 GTG+M C Sbjct: 3 GTGIMDC 9>NP_001157586 Length = 732 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 GTG+M C Sbjct: 3 GTGIMDC 9>NP_001157587 Length = 349 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 GTG+M C Sbjct: 3 GTGIMDC 9>NP_116192 Length = 619 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAGTGVMIC 9 KAG ++IC Sbjct: 61 KAGPSIVIC 69>NP_954863 Length = 522 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KAGTGVMIC 9 K TG M+C Sbjct: 324 KGRTGTMVC 332>XP_006723894 Length = 732 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 GTG+M C Sbjct: 3 GTGIMDC 9>NP_001041629 Length = 619 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAGTGVMIC 9 KAG ++IC Sbjct: 61 KAGPSIVIC 69>NP_570141 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KAGTGVMIC 9 K TG M+C Sbjct: 247 KGRTGTMVC 255>NP_001135440 Length = 411 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KAGTGVMIC 9 K TG M+C Sbjct: 213 KGRTGTMVC 221>NP_001243749 Length = 183 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAGTGVMIC 9 +AG G +IC Sbjct: 55 RAGEGFIIC 63>NP_001243750 Length = 236 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAGTGVMIC 9 +AG G +IC Sbjct: 108 RAGEGFIIC 116>NP_008843 Length = 219 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAGTGVMIC 9 +AG G +IC Sbjct: 91 RAGEGFIIC 99>NP_775821 Length = 1326 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KAGTGVMIC 9 K G G+++C Sbjct: 832 KEGIGMLVC 840>XP_005251455 Length = 1334 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KAGTGVMIC 9 K G G+++C Sbjct: 840 KEGIGMLVC 848>XP_005251456 Length = 1334 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KAGTGVMIC 9 K G G+++C Sbjct: 840 KEGIGMLVC 848>XP_005251454 Length = 1334 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KAGTGVMIC 9 K G G+++C Sbjct: 840 KEGIGMLVC 848>NP_001005162 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 G G++IC Sbjct: 61 GNGILIC 67>NP_003092 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 G GV++C Sbjct: 510 GNGVLLC 516>NP_001239441 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 G GV++C Sbjct: 445 GNGVLLC 451>NP_002370 Length = 496 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AGTGVMIC 9 +GT +M+C Sbjct: 5 SGTSLMLC 12>NP_004382 Length = 501 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 G+GV IC Sbjct: 434 GSGVSIC 440>NP_001271426 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 GTG ++C Sbjct: 403 GTGAVLC 409>NP_001239440 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 G GV++C Sbjct: 452 GNGVLLC 458>NP_114428 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 GTG ++C Sbjct: 403 GTGAVLC 409>NP_700356 Length = 1119 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AGTGVMIC 9 AG G+++C Sbjct: 11 AGLGLLLC 18>NP_071442 Length = 690 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AGTGVMIC 9 +G GV IC Sbjct: 49 SGNGVTIC 56>NP_001007564 Length = 278 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 GTG+ +C Sbjct: 102 GTGLCVC 108>XP_006723098 Length = 255 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 KAGTGVMIC 9 K G G ++C Sbjct: 30 KPGAGALLC 38>XP_005255680 Length = 543 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 GTG ++C Sbjct: 394 GTGAVLC 400>XP_006721020 Length = 543 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 GTG ++C Sbjct: 394 GTGAVLC 400>XP_005255679 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 GTG ++C Sbjct: 403 GTGAVLC 409>XP_006721019 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 GTG ++C Sbjct: 403 GTGAVLC 409>NP_003316 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 G G+++C Sbjct: 340 GLGILVC 346>NP_000304 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GTGVMI 8 GTGVM+ Sbjct: 519 GTGVML 524>NP_000383 Length = 1545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AGTGVMI 8 AG GVM+ Sbjct: 465 AGVGVMV 471>NP_060034 Length = 2551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 KAGTGVMIC 9 K GTG C Sbjct: 887 KTGTGTHTC 895>NP_954868 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 TGVMIC 9 TG M+C Sbjct: 327 TGTMVC 332>NP_954869 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 TGVMIC 9 TG M+C Sbjct: 307 TGTMVC 312>NP_001277153 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 TGVMIC 9 TG M+C Sbjct: 207 TGTMVC 212>NP_954870 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 TGVMIC 9 TG M+C Sbjct: 345 TGTMVC 350>NP_031384 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 G+G M+C Sbjct: 99 GSGEMVC 105>NP_005888 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 KAGTGVMIC 9 + G GV +C Sbjct: 380 RCGLGVCVC 388>NP_002010 Length = 1338 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TGVMIC 9 TGV++C Sbjct: 7 TGVLLC 12>NP_001157864 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 G+G M+C Sbjct: 99 GSGEMVC 105>NP_001153392 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TGVMIC 9 TGV++C Sbjct: 7 TGVLLC 12>NP_001153503 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TGVMIC 9 TGV++C Sbjct: 7 TGVLLC 12>NP_001153502 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TGVMIC 9 TGV++C Sbjct: 7 TGVLLC 12>NP_003003 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AGTGVMIC 9 AGT V +C Sbjct: 107 AGTQVFLC 114>NP_005754 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 GTGVMIC 9 G+G+++C Sbjct: 392 GSGILMC 398>NP_001092286 Length = 2769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTGVMI 8 +GTG+MI Sbjct: 2371 SGTGLMI 2377>NP_079199 Length = 1887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AGTGVMI 8 AGT VMI Sbjct: 1819 AGTAVMI 1825>NP_149116 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 G+G M+C Sbjct: 479 GSGSMVC 485>NP_001138821 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 KAGTGVMIC 9 + G GV +C Sbjct: 380 RCGLGVCVC 388>XP_006719539 Length = 2246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 KAGTGVMIC 9 K GTG C Sbjct: 887 KTGTGTHTC 895>XP_006718561 Length = 2794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTGVMI 8 +GTG+MI Sbjct: 2396 SGTGLMI 2402>XP_005253263 Length = 1231 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 TGVMIC 9 TG+++C Sbjct: 1206 TGILVC 1211>XP_006717694 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AGTGVMI 8 AG GVM+ Sbjct: 465 AGVGVMV 471>XP_006717693 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AGTGVMI 8 AG GVM+ Sbjct: 233 AGVGVMV 239>XP_005267241 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 G+G M+C Sbjct: 309 GSGSMVC 315>XP_005247683 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GTGVMI 8 GTGVM+ Sbjct: 551 GTGVML 556>XP_006710686 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 KAGTGVMIC 9 + G GV +C Sbjct: 380 RCGLGVCVC 388>XP_005270897 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 KAGTGVMIC 9 + G GV +C Sbjct: 380 RCGLGVCVC 388>XP_005270896 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 KAGTGVMIC 9 + G GV +C Sbjct: 380 RCGLGVCVC 388>NP_001139669 Length = 7081 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KAGTGVMI 8 K+G GVM+ Sbjct: 5194 KSGPGVML 5201>NP_653176 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GTGVMIC 9 GT V++C Sbjct: 381 GTNVVVC 387Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.140 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 712,289 Number of extensions: 1808 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |